EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000004783 (Gene tree)
Gene ID: 103233078
Gene Symbol: USB1
Alias: C16orf57|FLJ13154|HVSL1|Mpn1
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 24228 bases
Position: chr5:43932847-43957074
Accession: 103233078
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000001111	HVSL	PF09749.9	1.7e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000002815	USB1-201	2325	-	ENSCSAP00000001111	265 (aa)	XP_007991685	A0A0D9QXM2

Gene Model

Click here to download ENSCSAG00000004783's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000004783's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000004783	USB1	100	96.604	ENSG00000103005	USB1	100	96.729	Homo_sapiens
ENSCSAG00000004783	USB1	98	45.878	ENSAPOG00000011942	usb1	83	50.644	Acanthochromis_polyacanthus
ENSCSAG00000004783	USB1	100	84.758	ENSAMEG00000017205	USB1	100	84.758	Ailuropoda_melanoleuca
ENSCSAG00000004783	USB1	85	54.018	ENSACIG00000012234	usb1	82	54.018	Amphilophus_citrinellus
ENSCSAG00000004783	USB1	95	50.199	ENSAOCG00000014831	usb1	80	53.744	Amphiprion_ocellaris
ENSCSAG00000004783	USB1	95	50.598	ENSAPEG00000000296	usb1	80	54.185	Amphiprion_percula
ENSCSAG00000004783	USB1	99	49.049	ENSATEG00000009348	usb1	82	52.814	Anabas_testudineus
ENSCSAG00000004783	USB1	85	70.925	ENSAPLG00000002756	USB1	100	70.796	Anas_platyrhynchos
ENSCSAG00000004783	USB1	86	64.192	ENSACAG00000015481	USB1	100	64.192	Anolis_carolinensis
ENSCSAG00000004783	USB1	100	95.849	ENSANAG00000035640	USB1	100	95.849	Aotus_nancymaae
ENSCSAG00000004783	USB1	94	50.201	ENSACLG00000020586	usb1	80	53.097	Astatotilapia_calliptera
ENSCSAG00000004783	USB1	84	51.570	ENSAMXG00000040146	usb1	74	51.570	Astyanax_mexicanus
ENSCSAG00000004783	USB1	100	84.528	ENSBTAG00000015758	USB1	100	84.528	Bos_taurus
ENSCSAG00000004783	USB1	100	96.226	ENSCJAG00000011733	USB1	100	96.226	Callithrix_jacchus
ENSCSAG00000004783	USB1	99	82.721	ENSCAFG00000008556	USB1	73	81.618	Canis_familiaris
ENSCSAG00000004783	USB1	99	83.774	ENSCAFG00020009263	USB1	99	80.586	Canis_lupus_dingo
ENSCSAG00000004783	USB1	100	84.151	ENSCHIG00000024290	USB1	100	84.151	Capra_hircus
ENSCSAG00000004783	USB1	100	90.943	ENSTSYG00000006997	USB1	100	90.943	Carlito_syrichta
ENSCSAG00000004783	USB1	88	71.983	ENSCAPG00000009057	USB1	100	71.983	Cavia_aperea
ENSCSAG00000004783	USB1	100	83.209	ENSCPOG00000014325	USB1	100	82.090	Cavia_porcellus
ENSCSAG00000004783	USB1	100	95.849	ENSCCAG00000022132	USB1	100	95.849	Cebus_capucinus
ENSCSAG00000004783	USB1	100	98.113	ENSCATG00000032174	USB1	100	98.113	Cercocebus_atys
ENSCSAG00000004783	USB1	66	88.068	ENSCLAG00000007363	USB1	100	88.068	Chinchilla_lanigera
ENSCSAG00000004783	USB1	92	66.531	ENSCPBG00000026943	USB1	100	62.230	Chrysemys_picta_bellii
ENSCSAG00000004783	USB1	83	30.263	ENSCSAVG00000000894	-	82	30.131	Ciona_savignyi
ENSCSAG00000004783	USB1	100	97.736	ENSCANG00000037135	USB1	100	97.736	Colobus_angolensis_palliatus
ENSCSAG00000004783	USB1	100	85.075	ENSCGRG00001011243	USB1	100	84.701	Cricetulus_griseus_chok1gshd
ENSCSAG00000004783	USB1	100	85.075	ENSCGRG00000013252	USB1	100	84.701	Cricetulus_griseus_crigri
ENSCSAG00000004783	USB1	98	47.810	ENSCSEG00000013881	usb1	84	50.215	Cynoglossus_semilaevis
ENSCSAG00000004783	USB1	85	49.561	ENSCVAG00000009252	usb1	97	50.000	Cyprinodon_variegatus
ENSCSAG00000004783	USB1	90	48.117	ENSDARG00000003841	usb1	81	50.446	Danio_rerio
ENSCSAG00000004783	USB1	100	83.396	ENSDORG00000001888	Usb1	100	83.396	Dipodomys_ordii
ENSCSAG00000004783	USB1	77	40.476	FBgn0037713	CG16790	78	40.476	Drosophila_melanogaster
ENSCSAG00000004783	USB1	100	70.787	ENSETEG00000019682	USB1	100	70.412	Echinops_telfairi
ENSCSAG00000004783	USB1	84	51.351	ENSEBUG00000005889	usb1	78	51.351	Eptatretus_burgeri
ENSCSAG00000004783	USB1	100	87.170	ENSEASG00005005484	USB1	100	87.170	Equus_asinus_asinus
ENSCSAG00000004783	USB1	100	87.925	ENSECAG00000019493	USB1	91	87.925	Equus_caballus
ENSCSAG00000004783	USB1	66	79.545	ENSEEUG00000000154	USB1	66	79.545	Erinaceus_europaeus
ENSCSAG00000004783	USB1	86	50.000	ENSELUG00000010974	usb1	84	50.000	Esox_lucius
ENSCSAG00000004783	USB1	100	86.891	ENSFCAG00000002693	USB1	100	86.891	Felis_catus
ENSCSAG00000004783	USB1	85	67.257	ENSFALG00000006876	USB1	99	62.731	Ficedula_albicollis
ENSCSAG00000004783	USB1	100	86.142	ENSFDAG00000010052	USB1	100	85.393	Fukomys_damarensis
ENSCSAG00000004783	USB1	86	47.967	ENSFHEG00000012334	usb1	78	52.551	Fundulus_heteroclitus
ENSCSAG00000004783	USB1	84	51.121	ENSGMOG00000004228	usb1	99	51.121	Gadus_morhua
ENSCSAG00000004783	USB1	84	67.857	ENSGALG00000035604	USB1	100	63.534	Gallus_gallus
ENSCSAG00000004783	USB1	98	48.364	ENSGAFG00000021890	usb1	87	50.617	Gambusia_affinis
ENSCSAG00000004783	USB1	85	51.770	ENSGACG00000003257	usb1	81	51.770	Gasterosteus_aculeatus
ENSCSAG00000004783	USB1	100	63.869	ENSGAGG00000022572	USB1	100	62.637	Gopherus_agassizii
ENSCSAG00000004783	USB1	100	97.358	ENSGGOG00000017147	USB1	100	97.358	Gorilla_gorilla
ENSCSAG00000004783	USB1	94	51.004	ENSHBUG00000009823	usb1	81	53.744	Haplochromis_burtoni
ENSCSAG00000004783	USB1	100	86.891	ENSHGLG00000016078	USB1	98	86.142	Heterocephalus_glaber_female
ENSCSAG00000004783	USB1	100	86.891	ENSHGLG00100005562	USB1	98	86.142	Heterocephalus_glaber_male
ENSCSAG00000004783	USB1	82	54.378	ENSHCOG00000015633	usb1	86	54.260	Hippocampus_comes
ENSCSAG00000004783	USB1	85	54.018	ENSIPUG00000008601	usb1	78	54.018	Ictalurus_punctatus
ENSCSAG00000004783	USB1	100	85.036	ENSSTOG00000007548	USB1	100	84.615	Ictidomys_tridecemlineatus
ENSCSAG00000004783	USB1	100	86.567	ENSJJAG00000021859	Usb1	100	85.768	Jaculus_jaculus
ENSCSAG00000004783	USB1	96	49.027	ENSKMAG00000007200	usb1	80	52.863	Kryptolebias_marmoratus
ENSCSAG00000004783	USB1	75	51.759	ENSLBEG00000008452	usb1	64	52.632	Labrus_bergylta
ENSCSAG00000004783	USB1	91	54.286	ENSLACG00000000105	USB1	76	57.205	Latimeria_chalumnae
ENSCSAG00000004783	USB1	95	53.725	ENSLOCG00000000465	usb1	85	55.187	Lepisosteus_oculatus
ENSCSAG00000004783	USB1	100	65.314	ENSLAFG00000002267	USB1	100	65.185	Loxodonta_africana
ENSCSAG00000004783	USB1	100	98.491	ENSMFAG00000003926	USB1	100	98.491	Macaca_fascicularis
ENSCSAG00000004783	USB1	100	98.491	ENSMMUG00000022669	USB1	100	98.491	Macaca_mulatta
ENSCSAG00000004783	USB1	100	98.113	ENSMNEG00000042487	USB1	100	98.113	Macaca_nemestrina
ENSCSAG00000004783	USB1	100	98.491	ENSMLEG00000028756	USB1	100	98.491	Mandrillus_leucophaeus
ENSCSAG00000004783	USB1	98	48.014	ENSMAMG00000015092	usb1	83	51.931	Mastacembelus_armatus
ENSCSAG00000004783	USB1	94	50.201	ENSMZEG00005010008	usb1	80	53.097	Maylandia_zebra
ENSCSAG00000004783	USB1	100	85.019	ENSMAUG00000007832	Usb1	100	84.270	Mesocricetus_auratus
ENSCSAG00000004783	USB1	100	90.566	ENSMICG00000004900	USB1	100	90.566	Microcebus_murinus
ENSCSAG00000004783	USB1	100	84.701	ENSMOCG00000022647	Usb1	100	84.270	Microtus_ochrogaster
ENSCSAG00000004783	USB1	86	52.632	ENSMMOG00000000490	usb1	88	52.632	Mola_mola
ENSCSAG00000004783	USB1	100	69.030	ENSMODG00000014067	USB1	100	67.537	Monodelphis_domestica
ENSCSAG00000004783	USB1	94	50.201	ENSMALG00000005930	usb1	80	53.304	Monopterus_albus
ENSCSAG00000004783	USB1	100	81.273	MGP_CAROLIEiJ_G0031421	Usb1	100	84.071	Mus_caroli
ENSCSAG00000004783	USB1	100	81.648	ENSMUSG00000031792	Usb1	100	84.956	Mus_musculus
ENSCSAG00000004783	USB1	100	82.022	MGP_PahariEiJ_G0023019	Usb1	100	85.470	Mus_pahari
ENSCSAG00000004783	USB1	100	80.899	MGP_SPRETEiJ_G0032540	Usb1	100	80.150	Mus_spretus
ENSCSAG00000004783	USB1	100	82.900	ENSMPUG00000004684	USB1	96	82.528	Mustela_putorius_furo
ENSCSAG00000004783	USB1	87	89.177	ENSMLUG00000007400	USB1	100	89.177	Myotis_lucifugus
ENSCSAG00000004783	USB1	100	84.074	ENSNGAG00000009703	Usb1	100	83.643	Nannospalax_galili
ENSCSAG00000004783	USB1	88	48.069	ENSNBRG00000008747	usb1	99	52.804	Neolamprologus_brichardi
ENSCSAG00000004783	USB1	94	97.600	ENSNLEG00000003340	USB1	100	97.600	Nomascus_leucogenys
ENSCSAG00000004783	USB1	56	59.615	ENSMEUG00000003328	-	100	60.526	Notamacropus_eugenii
ENSCSAG00000004783	USB1	63	87.879	ENSOPRG00000011803	USB1	72	87.879	Ochotona_princeps
ENSCSAG00000004783	USB1	100	82.397	ENSODEG00000016214	USB1	100	82.397	Octodon_degus
ENSCSAG00000004783	USB1	98	47.872	ENSONIG00000011063	usb1	81	53.304	Oreochromis_niloticus
ENSCSAG00000004783	USB1	85	74.667	ENSOANG00000012118	USB1	94	74.667	Ornithorhynchus_anatinus
ENSCSAG00000004783	USB1	94	47.791	ENSORLG00000012479	usb1	83	50.439	Oryzias_latipes
ENSCSAG00000004783	USB1	94	47.791	ENSORLG00020018671	usb1	99	47.407	Oryzias_latipes_hni
ENSCSAG00000004783	USB1	86	50.439	ENSORLG00015009679	usb1	84	50.439	Oryzias_latipes_hsok
ENSCSAG00000004783	USB1	85	50.000	ENSOMEG00000012930	usb1	82	49.561	Oryzias_melastigma
ENSCSAG00000004783	USB1	100	82.264	ENSOGAG00000003273	USB1	100	82.264	Otolemur_garnettii
ENSCSAG00000004783	USB1	95	82.609	ENSOARG00000001107	USB1	93	84.774	Ovis_aries
ENSCSAG00000004783	USB1	100	96.981	ENSPPAG00000042137	USB1	100	96.981	Pan_paniscus
ENSCSAG00000004783	USB1	100	86.891	ENSPPRG00000024797	USB1	100	86.891	Panthera_pardus
ENSCSAG00000004783	USB1	100	86.891	ENSPTIG00000007506	USB1	100	86.891	Panthera_tigris_altaica
ENSCSAG00000004783	USB1	100	89.811	ENSPTRG00000008172	USB1	100	97.664	Pan_troglodytes
ENSCSAG00000004783	USB1	100	98.491	ENSPANG00000025138	USB1	100	98.491	Papio_anubis
ENSCSAG00000004783	USB1	93	53.226	ENSPKIG00000015109	usb1	76	55.111	Paramormyrops_kingsleyae
ENSCSAG00000004783	USB1	85	54.425	ENSPSIG00000004305	USB1	100	54.425	Pelodiscus_sinensis
ENSCSAG00000004783	USB1	84	52.018	ENSPMGG00000017725	usb1	85	52.018	Periophthalmus_magnuspinnatus
ENSCSAG00000004783	USB1	100	83.150	ENSPEMG00000016183	Usb1	100	80.515	Peromyscus_maniculatus_bairdii
ENSCSAG00000004783	USB1	89	49.367	ENSPMAG00000000462	usb1	100	49.367	Petromyzon_marinus
ENSCSAG00000004783	USB1	98	48.551	ENSPFOG00000011130	usb1	82	52.193	Poecilia_formosa
ENSCSAG00000004783	USB1	98	48.551	ENSPLAG00000009820	usb1	82	52.193	Poecilia_latipinna
ENSCSAG00000004783	USB1	98	48.551	ENSPMEG00000006402	usb1	82	52.193	Poecilia_mexicana
ENSCSAG00000004783	USB1	86	48.361	ENSPREG00000001047	usb1	79	53.571	Poecilia_reticulata
ENSCSAG00000004783	USB1	95	93.651	ENSPPYG00000007401	USB1	100	93.651	Pongo_abelii
ENSCSAG00000004783	USB1	100	92.075	ENSPCOG00000022612	USB1	100	92.075	Propithecus_coquereli
ENSCSAG00000004783	USB1	100	81.887	ENSPVAG00000004613	USB1	100	81.887	Pteropus_vampyrus
ENSCSAG00000004783	USB1	94	51.004	ENSPNYG00000022262	usb1	81	53.744	Pundamilia_nyererei
ENSCSAG00000004783	USB1	98	47.510	ENSPNAG00000011736	usb1	76	52.232	Pygocentrus_nattereri
ENSCSAG00000004783	USB1	100	83.895	ENSRNOG00000013216	Usb1	100	83.146	Rattus_norvegicus
ENSCSAG00000004783	USB1	100	92.075	ENSRBIG00000044466	USB1	100	99.065	Rhinopithecus_bieti
ENSCSAG00000004783	USB1	100	98.868	ENSRROG00000029211	USB1	100	98.868	Rhinopithecus_roxellana
ENSCSAG00000004783	USB1	100	95.094	ENSSBOG00000029362	USB1	100	95.094	Saimiri_boliviensis_boliviensis
ENSCSAG00000004783	USB1	83	73.973	ENSSHAG00000006993	USB1	96	70.492	Sarcophilus_harrisii
ENSCSAG00000004783	USB1	89	55.882	ENSSFOG00015023663	usb1	75	55.882	Scleropages_formosus
ENSCSAG00000004783	USB1	98	48.913	ENSSMAG00000015834	usb1	99	47.619	Scophthalmus_maximus
ENSCSAG00000004783	USB1	85	54.911	ENSSDUG00000002949	usb1	83	54.911	Seriola_dumerili
ENSCSAG00000004783	USB1	85	54.425	ENSSLDG00000014174	usb1	80	54.425	Seriola_lalandi_dorsalis
ENSCSAG00000004783	USB1	81	69.626	ENSSPUG00000006741	USB1	100	69.626	Sphenodon_punctatus
ENSCSAG00000004783	USB1	98	46.181	ENSSPAG00000007484	usb1	80	51.982	Stegastes_partitus
ENSCSAG00000004783	USB1	100	84.387	ENSSSCG00000002807	USB1	100	82.900	Sus_scrofa
ENSCSAG00000004783	USB1	80	70.283	ENSTGUG00000004792	USB1	87	68.919	Taeniopygia_guttata
ENSCSAG00000004783	USB1	98	48.507	ENSTRUG00000021069	usb1	86	49.785	Takifugu_rubripes
ENSCSAG00000004783	USB1	98	46.038	ENSTNIG00000000626	usb1	83	48.661	Tetraodon_nigroviridis
ENSCSAG00000004783	USB1	88	62.069	ENSTBEG00000001507	USB1	100	62.069	Tupaia_belangeri
ENSCSAG00000004783	USB1	100	84.758	ENSUAMG00000016823	USB1	100	85.130	Ursus_americanus
ENSCSAG00000004783	USB1	81	88.785	ENSUMAG00000021369	USB1	100	88.785	Ursus_maritimus
ENSCSAG00000004783	USB1	77	61.576	ENSVPAG00000009834	-	59	88.333	Vicugna_pacos
ENSCSAG00000004783	USB1	99	83.582	ENSVVUG00000023700	USB1	93	86.307	Vulpes_vulpes
ENSCSAG00000004783	USB1	82	55.505	ENSXETG00000013795	usb1	94	53.814	Xenopus_tropicalis
ENSCSAG00000004783	USB1	86	52.632	ENSXMAG00000024687	usb1	67	52.632	Xiphophorus_maculatus