EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000004868 (Gene tree)
Gene ID: 103234420
Gene Symbol: POP4
Alias: RPP29
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 6816 bases
Position: chr6:24675868-24682683
Accession: 30081
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000001188	UPF0086	PF01868.16	4.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000002893	POP4-201	721	-	ENSCSAP00000001188	218 (aa)	-	A0A0D9QXU9

Gene Model

Click here to download ENSCSAG00000004868's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03008	Ribosome biogenesis in eukaryotes	KEGG
csab03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000004868's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000004868	POP4	100	96.789	ENSG00000105171	POP4	100	98.958	Homo_sapiens
ENSCSAG00000004868	POP4	98	77.209	ENSAMEG00000003172	-	97	77.209	Ailuropoda_melanoleuca
ENSCSAG00000004868	POP4	100	88.532	ENSAMEG00000018329	-	99	88.532	Ailuropoda_melanoleuca
ENSCSAG00000004868	POP4	99	59.259	ENSACIG00000008358	pop4	98	59.259	Amphilophus_citrinellus
ENSCSAG00000004868	POP4	92	63.725	ENSAOCG00000010116	pop4	99	63.235	Amphiprion_ocellaris
ENSCSAG00000004868	POP4	93	62.255	ENSAPEG00000002829	pop4	86	61.765	Amphiprion_percula
ENSCSAG00000004868	POP4	93	62.802	ENSATEG00000013028	pop4	92	62.319	Anabas_testudineus
ENSCSAG00000004868	POP4	93	74.257	ENSAPLG00000014051	POP4	98	74.257	Anas_platyrhynchos
ENSCSAG00000004868	POP4	99	96.296	ENSANAG00000020295	POP4	98	96.296	Aotus_nancymaae
ENSCSAG00000004868	POP4	93	61.881	ENSACLG00000000526	pop4	91	61.881	Astatotilapia_calliptera
ENSCSAG00000004868	POP4	99	60.930	ENSAMXG00000002899	pop4	98	60.930	Astyanax_mexicanus
ENSCSAG00000004868	POP4	100	89.908	ENSBTAG00000002223	POP4	99	89.908	Bos_taurus
ENSCSAG00000004868	POP4	53	30.172	WBGene00007603	C15C6.4	57	30.172	Caenorhabditis_elegans
ENSCSAG00000004868	POP4	99	94.009	ENSCJAG00000046750	POP4	100	93.889	Callithrix_jacchus
ENSCSAG00000004868	POP4	83	90.608	ENSCAFG00000007630	POP4	99	90.608	Canis_familiaris
ENSCSAG00000004868	POP4	100	89.908	ENSCHIG00000016743	POP4	99	89.908	Capra_hircus
ENSCSAG00000004868	POP4	100	89.450	ENSTSYG00000003488	POP4	99	89.450	Carlito_syrichta
ENSCSAG00000004868	POP4	99	65.899	ENSCAPG00000011105	POP4	100	65.899	Cavia_aperea
ENSCSAG00000004868	POP4	100	87.156	ENSCPOG00000002992	POP4	99	87.156	Cavia_porcellus
ENSCSAG00000004868	POP4	99	95.833	ENSCCAG00000020285	-	98	95.833	Cebus_capucinus
ENSCSAG00000004868	POP4	99	80.556	ENSCCAG00000034244	-	98	80.556	Cebus_capucinus
ENSCSAG00000004868	POP4	100	98.624	ENSCATG00000036022	POP4	100	98.958	Cercocebus_atys
ENSCSAG00000004868	POP4	100	88.073	ENSCLAG00000013162	POP4	99	88.073	Chinchilla_lanigera
ENSCSAG00000004868	POP4	99	66.204	ENSCHOG00000002071	POP4	100	65.899	Choloepus_hoffmanni
ENSCSAG00000004868	POP4	100	74.312	ENSCPBG00000016132	POP4	99	74.312	Chrysemys_picta_bellii
ENSCSAG00000004868	POP4	85	34.031	ENSCING00000023871	-	94	31.937	Ciona_intestinalis
ENSCSAG00000004868	POP4	93	99.010	ENSCANG00000005924	POP4	100	99.010	Colobus_angolensis_palliatus
ENSCSAG00000004868	POP4	100	83.028	ENSCGRG00001017185	Pop4	99	83.486	Cricetulus_griseus_chok1gshd
ENSCSAG00000004868	POP4	100	83.028	ENSCGRG00000008155	Pop4	99	83.486	Cricetulus_griseus_crigri
ENSCSAG00000004868	POP4	93	54.634	ENSCSEG00000002946	pop4	92	53.922	Cynoglossus_semilaevis
ENSCSAG00000004868	POP4	93	45.588	ENSCVAG00000018602	POP4	87	45.098	Cyprinodon_variegatus
ENSCSAG00000004868	POP4	89	70.619	ENSDARG00000101472	pop4	88	70.619	Danio_rerio
ENSCSAG00000004868	POP4	99	88.479	ENSDNOG00000047663	POP4	87	88.479	Dasypus_novemcinctus
ENSCSAG00000004868	POP4	79	83.721	ENSDORG00000008577	Pop4	100	83.721	Dipodomys_ordii
ENSCSAG00000004868	POP4	69	37.342	FBgn0035831	CG8038	70	37.931	Drosophila_melanogaster
ENSCSAG00000004868	POP4	99	74.654	ENSETEG00000003607	POP4	100	74.654	Echinops_telfairi
ENSCSAG00000004868	POP4	100	42.857	ENSEBUG00000004305	pop4	99	42.609	Eptatretus_burgeri
ENSCSAG00000004868	POP4	92	48.598	ENSEBUG00000010447	pop4	82	48.571	Eptatretus_burgeri
ENSCSAG00000004868	POP4	99	46.083	ENSEBUG00000008575	pop4	98	45.622	Eptatretus_burgeri
ENSCSAG00000004868	POP4	99	90.385	ENSECAG00000020206	POP4	81	90.385	Equus_caballus
ENSCSAG00000004868	POP4	90	69.036	ENSEEUG00000013109	POP4	99	69.036	Erinaceus_europaeus
ENSCSAG00000004868	POP4	90	65.816	ENSELUG00000019812	pop4	89	65.816	Esox_lucius
ENSCSAG00000004868	POP4	100	89.450	ENSFCAG00000001619	POP4	99	89.450	Felis_catus
ENSCSAG00000004868	POP4	99	69.907	ENSFALG00000000206	POP4	96	69.907	Ficedula_albicollis
ENSCSAG00000004868	POP4	100	88.073	ENSFDAG00000017859	POP4	99	88.073	Fukomys_damarensis
ENSCSAG00000004868	POP4	90	58.000	ENSFHEG00000012745	pop4	94	56.039	Fundulus_heteroclitus
ENSCSAG00000004868	POP4	88	64.948	ENSGMOG00000000335	pop4	96	64.948	Gadus_morhua
ENSCSAG00000004868	POP4	100	69.725	ENSGALG00000041972	POP4	92	69.725	Gallus_gallus
ENSCSAG00000004868	POP4	78	52.571	ENSGAFG00000003571	pop4	96	51.724	Gambusia_affinis
ENSCSAG00000004868	POP4	93	62.802	ENSGACG00000014510	pop4	93	68.605	Gasterosteus_aculeatus
ENSCSAG00000004868	POP4	99	76.037	ENSGAGG00000024544	POP4	78	76.037	Gopherus_agassizii
ENSCSAG00000004868	POP4	100	97.706	ENSGGOG00000038346	POP4	99	97.706	Gorilla_gorilla
ENSCSAG00000004868	POP4	93	61.881	ENSHBUG00000021821	pop4	91	61.881	Haplochromis_burtoni
ENSCSAG00000004868	POP4	100	88.073	ENSHGLG00000015798	POP4	99	88.073	Heterocephalus_glaber_female
ENSCSAG00000004868	POP4	99	88.018	ENSHGLG00100009737	POP4	99	88.018	Heterocephalus_glaber_male
ENSCSAG00000004868	POP4	93	63.861	ENSHCOG00000020937	pop4	91	63.861	Hippocampus_comes
ENSCSAG00000004868	POP4	100	60.550	ENSIPUG00000013652	pop4	99	60.550	Ictalurus_punctatus
ENSCSAG00000004868	POP4	100	88.991	ENSSTOG00000011016	POP4	99	88.991	Ictidomys_tridecemlineatus
ENSCSAG00000004868	POP4	100	88.991	ENSJJAG00000013376	Pop4	99	88.991	Jaculus_jaculus
ENSCSAG00000004868	POP4	99	61.009	ENSKMAG00000012250	pop4	98	60.550	Kryptolebias_marmoratus
ENSCSAG00000004868	POP4	93	59.804	ENSLBEG00000018846	-	91	59.804	Labrus_bergylta
ENSCSAG00000004868	POP4	93	59.804	ENSLBEG00000014139	pop4	91	59.804	Labrus_bergylta
ENSCSAG00000004868	POP4	99	64.977	ENSLACG00000008581	POP4	98	64.977	Latimeria_chalumnae
ENSCSAG00000004868	POP4	99	70.046	ENSLOCG00000005597	pop4	99	70.046	Lepisosteus_oculatus
ENSCSAG00000004868	POP4	99	90.783	ENSLAFG00000000084	POP4	99	90.783	Loxodonta_africana
ENSCSAG00000004868	POP4	100	99.541	ENSMFAG00000029606	POP4	99	99.541	Macaca_fascicularis
ENSCSAG00000004868	POP4	100	98.630	ENSMMUG00000017424	POP4	99	98.630	Macaca_mulatta
ENSCSAG00000004868	POP4	100	98.630	ENSMNEG00000031374	POP4	99	98.630	Macaca_nemestrina
ENSCSAG00000004868	POP4	100	97.706	ENSMLEG00000043454	POP4	99	97.706	Mandrillus_leucophaeus
ENSCSAG00000004868	POP4	85	65.957	ENSMAMG00000011716	pop4	91	63.235	Mastacembelus_armatus
ENSCSAG00000004868	POP4	93	61.881	ENSMZEG00005002360	pop4	91	61.881	Maylandia_zebra
ENSCSAG00000004868	POP4	100	70.183	ENSMGAG00000005337	POP4	97	70.183	Meleagris_gallopavo
ENSCSAG00000004868	POP4	100	84.862	ENSMAUG00000020110	Pop4	99	84.862	Mesocricetus_auratus
ENSCSAG00000004868	POP4	100	87.156	ENSMICG00000035730	POP4	98	87.156	Microcebus_murinus
ENSCSAG00000004868	POP4	93	62.376	ENSMMOG00000015321	pop4	91	62.376	Mola_mola
ENSCSAG00000004868	POP4	99	79.630	ENSMODG00000029406	POP4	94	79.630	Monodelphis_domestica
ENSCSAG00000004868	POP4	97	62.736	ENSMALG00000012571	pop4	96	62.736	Monopterus_albus
ENSCSAG00000004868	POP4	100	83.105	MGP_CAROLIEiJ_G0029600	Pop4	99	83.105	Mus_caroli
ENSCSAG00000004868	POP4	100	83.562	ENSMUSG00000030423	Pop4	99	83.105	Mus_musculus
ENSCSAG00000004868	POP4	100	83.028	MGP_SPRETEiJ_G0030699	Pop4	99	83.028	Mus_spretus
ENSCSAG00000004868	POP4	99	76.147	ENSMPUG00000008063	-	99	76.147	Mustela_putorius_furo
ENSCSAG00000004868	POP4	100	88.532	ENSMPUG00000008041	-	99	88.532	Mustela_putorius_furo
ENSCSAG00000004868	POP4	100	71.689	ENSMLUG00000010774	POP4	99	71.689	Myotis_lucifugus
ENSCSAG00000004868	POP4	57	84.800	ENSMEUG00000003636	-	100	84.800	Notamacropus_eugenii
ENSCSAG00000004868	POP4	91	93.434	ENSOPRG00000004736	POP4	99	93.434	Ochotona_princeps
ENSCSAG00000004868	POP4	99	87.558	ENSODEG00000013025	POP4	100	87.736	Octodon_degus
ENSCSAG00000004868	POP4	100	57.798	ENSONIG00000003458	pop4	97	57.798	Oreochromis_niloticus
ENSCSAG00000004868	POP4	100	90.826	ENSOCUG00000015974	POP4	99	90.826	Oryctolagus_cuniculus
ENSCSAG00000004868	POP4	92	59.901	ENSORLG00000020317	pop4	91	59.406	Oryzias_latipes
ENSCSAG00000004868	POP4	93	59.804	ENSORLG00015011624	pop4	91	59.314	Oryzias_latipes_hsok
ENSCSAG00000004868	POP4	93	62.439	ENSOMEG00000002538	pop4	91	61.275	Oryzias_melastigma
ENSCSAG00000004868	POP4	100	88.991	ENSOGAG00000011168	POP4	99	88.991	Otolemur_garnettii
ENSCSAG00000004868	POP4	100	89.498	ENSOARG00000004041	POP4	99	89.498	Ovis_aries
ENSCSAG00000004868	POP4	100	97.248	ENSPPAG00000040372	POP4	99	97.248	Pan_paniscus
ENSCSAG00000004868	POP4	100	89.450	ENSPPRG00000010502	POP4	99	89.450	Panthera_pardus
ENSCSAG00000004868	POP4	100	88.991	ENSPTIG00000016598	POP4	99	88.991	Panthera_tigris_altaica
ENSCSAG00000004868	POP4	100	97.248	ENSPTRG00000010779	POP4	99	97.248	Pan_troglodytes
ENSCSAG00000004868	POP4	100	99.541	ENSPANG00000008546	POP4	99	99.541	Papio_anubis
ENSCSAG00000004868	POP4	90	72.000	ENSPKIG00000004468	pop4	87	70.707	Paramormyrops_kingsleyae
ENSCSAG00000004868	POP4	100	77.064	ENSPSIG00000015690	POP4	100	78.713	Pelodiscus_sinensis
ENSCSAG00000004868	POP4	92	57.561	ENSPMGG00000008608	pop4	98	58.049	Periophthalmus_magnuspinnatus
ENSCSAG00000004868	POP4	100	83.945	ENSPEMG00000014034	-	95	83.945	Peromyscus_maniculatus_bairdii
ENSCSAG00000004868	POP4	100	69.266	ENSPEMG00000019982	-	100	69.266	Peromyscus_maniculatus_bairdii
ENSCSAG00000004868	POP4	67	67.586	ENSPMAG00000006265	pop4	99	57.360	Petromyzon_marinus
ENSCSAG00000004868	POP4	99	79.724	ENSPCIG00000024738	POP4	94	79.724	Phascolarctos_cinereus
ENSCSAG00000004868	POP4	99	57.339	ENSPFOG00000000925	pop4	98	56.682	Poecilia_formosa
ENSCSAG00000004868	POP4	93	60.784	ENSPLAG00000003161	pop4	91	60.099	Poecilia_latipinna
ENSCSAG00000004868	POP4	99	57.339	ENSPMEG00000002475	pop4	98	56.682	Poecilia_mexicana
ENSCSAG00000004868	POP4	91	60.500	ENSPREG00000022403	pop4	86	59.296	Poecilia_reticulata
ENSCSAG00000004868	POP4	100	97.706	ENSPPYG00000009805	POP4	99	97.706	Pongo_abelii
ENSCSAG00000004868	POP4	99	83.333	ENSPCAG00000007737	POP4	99	82.949	Procavia_capensis
ENSCSAG00000004868	POP4	100	88.991	ENSPCOG00000018055	POP4	99	88.991	Propithecus_coquereli
ENSCSAG00000004868	POP4	100	86.697	ENSPVAG00000006069	POP4	99	86.697	Pteropus_vampyrus
ENSCSAG00000004868	POP4	93	62.376	ENSPNYG00000020038	pop4	91	62.376	Pundamilia_nyererei
ENSCSAG00000004868	POP4	99	62.673	ENSPNAG00000005591	pop4	99	62.673	Pygocentrus_nattereri
ENSCSAG00000004868	POP4	100	84.475	ENSRNOG00000027646	Pop4	99	84.475	Rattus_norvegicus
ENSCSAG00000004868	POP4	80	97.714	ENSRBIG00000044769	POP4	91	97.714	Rhinopithecus_bieti
ENSCSAG00000004868	POP4	100	99.083	ENSRROG00000028903	POP4	99	99.083	Rhinopithecus_roxellana
ENSCSAG00000004868	POP4	58	35.252	YBR257W	-	50	35.252	Saccharomyces_cerevisiae
ENSCSAG00000004868	POP4	100	96.330	ENSSBOG00000032445	POP4	99	96.330	Saimiri_boliviensis_boliviensis
ENSCSAG00000004868	POP4	100	80.275	ENSSHAG00000016888	POP4	99	80.275	Sarcophilus_harrisii
ENSCSAG00000004868	POP4	93	68.137	ENSSFOG00015014556	pop4	90	67.822	Scleropages_formosus
ENSCSAG00000004868	POP4	90	65.327	ENSSMAG00000016611	pop4	93	64.824	Scophthalmus_maximus
ENSCSAG00000004868	POP4	93	62.745	ENSSDUG00000019865	pop4	82	62.255	Seriola_dumerili
ENSCSAG00000004868	POP4	93	62.745	ENSSLDG00000001763	pop4	91	62.255	Seriola_lalandi_dorsalis
ENSCSAG00000004868	POP4	99	86.636	ENSSARG00000004748	POP4	100	86.636	Sorex_araneus
ENSCSAG00000004868	POP4	93	64.216	ENSSPAG00000014364	pop4	91	63.725	Stegastes_partitus
ENSCSAG00000004868	POP4	100	89.908	ENSSSCG00000002854	POP4	99	89.908	Sus_scrofa
ENSCSAG00000004868	POP4	92	75.000	ENSTGUG00000008953	POP4	100	75.000	Taeniopygia_guttata
ENSCSAG00000004868	POP4	93	61.084	ENSTNIG00000006401	pop4	100	59.606	Tetraodon_nigroviridis
ENSCSAG00000004868	POP4	100	86.301	ENSTBEG00000002194	POP4	99	88.128	Tupaia_belangeri
ENSCSAG00000004868	POP4	100	90.367	ENSTTRG00000005882	POP4	99	90.367	Tursiops_truncatus
ENSCSAG00000004868	POP4	100	88.532	ENSUAMG00000003049	-	99	88.532	Ursus_americanus
ENSCSAG00000004868	POP4	100	88.532	ENSUMAG00000007522	-	99	88.532	Ursus_maritimus
ENSCSAG00000004868	POP4	93	89.604	ENSVVUG00000016876	-	71	89.604	Vulpes_vulpes
ENSCSAG00000004868	POP4	99	66.204	ENSXETG00000017598	pop4	98	65.278	Xenopus_tropicalis
ENSCSAG00000004868	POP4	91	61.386	ENSXCOG00000017695	pop4	86	59.701	Xiphophorus_couchianus
ENSCSAG00000004868	POP4	91	61.386	ENSXMAG00000013862	pop4	86	59.701	Xiphophorus_maculatus