EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000004891 (Gene tree)
Gene ID: 103216556
Gene Symbol: TRUB1
Alias: PUS4
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 39185 bases
Position: chr9:107809073-107848257
Accession: 103216556
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000001213	TruB_N	PF01509.18	2.6e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000002921	TRUB1-201	3393	-	ENSCSAP00000001213	350 (aa)	XP_007962361	A0A0D9QXX4

Gene Model

Click here to download ENSCSAG00000004891's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000004891's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000004891	TRUB1	64	31.140	ENSCSAG00000014117	TRUB2	68	31.140

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000004891	TRUB1	100	97.714	ENSG00000165832	TRUB1	100	97.714	Homo_sapiens
ENSCSAG00000004891	TRUB1	70	68.571	ENSAPOG00000020565	trub1	89	68.293	Acanthochromis_polyacanthus
ENSCSAG00000004891	TRUB1	96	93.491	ENSAMEG00000014931	TRUB1	99	93.162	Ailuropoda_melanoleuca
ENSCSAG00000004891	TRUB1	81	57.746	ENSACIG00000003060	trub1	94	57.746	Amphilophus_citrinellus
ENSCSAG00000004891	TRUB1	70	68.571	ENSAOCG00000017188	trub1	89	68.293	Amphiprion_ocellaris
ENSCSAG00000004891	TRUB1	70	67.886	ENSAPEG00000015209	trub1	89	67.886	Amphiprion_percula
ENSCSAG00000004891	TRUB1	69	68.880	ENSATEG00000023291	trub1	86	68.880	Anabas_testudineus
ENSCSAG00000004891	TRUB1	79	75.636	ENSAPLG00000006808	TRUB1	99	75.636	Anas_platyrhynchos
ENSCSAG00000004891	TRUB1	77	71.004	ENSACAG00000009282	TRUB1	97	71.004	Anolis_carolinensis
ENSCSAG00000004891	TRUB1	100	97.436	ENSANAG00000022870	TRUB1	100	97.436	Aotus_nancymaae
ENSCSAG00000004891	TRUB1	72	67.063	ENSACLG00000000823	trub1	91	67.063	Astatotilapia_calliptera
ENSCSAG00000004891	TRUB1	77	65.314	ENSAMXG00000015845	trub1	90	65.314	Astyanax_mexicanus
ENSCSAG00000004891	TRUB1	98	92.398	ENSBTAG00000012955	TRUB1	99	91.738	Bos_taurus
ENSCSAG00000004891	TRUB1	100	97.436	ENSCJAG00000047815	TRUB1	100	97.436	Callithrix_jacchus
ENSCSAG00000004891	TRUB1	99	93.696	ENSCAFG00000011688	TRUB1	99	93.696	Canis_familiaris
ENSCSAG00000004891	TRUB1	99	93.983	ENSCAFG00020013237	TRUB1	99	93.983	Canis_lupus_dingo
ENSCSAG00000004891	TRUB1	98	92.982	ENSCHIG00000020884	TRUB1	99	92.571	Capra_hircus
ENSCSAG00000004891	TRUB1	100	91.168	ENSTSYG00000000446	TRUB1	100	92.308	Carlito_syrichta
ENSCSAG00000004891	TRUB1	73	85.039	ENSCAPG00000017088	TRUB1	100	85.039	Cavia_aperea
ENSCSAG00000004891	TRUB1	71	79.435	ENSCPOG00000030129	-	86	79.032	Cavia_porcellus
ENSCSAG00000004891	TRUB1	70	85.714	ENSCPOG00000040236	-	100	85.714	Cavia_porcellus
ENSCSAG00000004891	TRUB1	100	96.581	ENSCCAG00000028842	TRUB1	100	96.581	Cebus_capucinus
ENSCSAG00000004891	TRUB1	100	99.429	ENSCATG00000033431	TRUB1	100	99.429	Cercocebus_atys
ENSCSAG00000004891	TRUB1	70	89.388	ENSCLAG00000008664	TRUB1	100	89.388	Chinchilla_lanigera
ENSCSAG00000004891	TRUB1	99	78.613	ENSCHOG00000011931	TRUB1	99	78.613	Choloepus_hoffmanni
ENSCSAG00000004891	TRUB1	78	79.412	ENSCPBG00000003051	TRUB1	94	79.412	Chrysemys_picta_bellii
ENSCSAG00000004891	TRUB1	100	99.714	ENSCANG00000029445	TRUB1	100	99.714	Colobus_angolensis_palliatus
ENSCSAG00000004891	TRUB1	73	87.795	ENSCGRG00001016772	-	90	79.461	Cricetulus_griseus_chok1gshd
ENSCSAG00000004891	TRUB1	80	80.000	ENSCGRG00001010322	-	79	79.932	Cricetulus_griseus_chok1gshd
ENSCSAG00000004891	TRUB1	80	88.929	ENSCGRG00000010806	Trub1	91	88.215	Cricetulus_griseus_crigri
ENSCSAG00000004891	TRUB1	73	62.500	ENSCSEG00000011261	trub1	97	56.811	Cynoglossus_semilaevis
ENSCSAG00000004891	TRUB1	74	65.891	ENSCVAG00000008791	trub1	79	65.891	Cyprinodon_variegatus
ENSCSAG00000004891	TRUB1	74	67.181	ENSDARG00000053805	trub1	89	67.181	Danio_rerio
ENSCSAG00000004891	TRUB1	97	87.353	ENSDNOG00000001069	TRUB1	99	86.571	Dasypus_novemcinctus
ENSCSAG00000004891	TRUB1	99	89.685	ENSDORG00000010431	Trub1	99	88.539	Dipodomys_ordii
ENSCSAG00000004891	TRUB1	81	77.941	ENSETEG00000009183	TRUB1	81	76.961	Echinops_telfairi
ENSCSAG00000004891	TRUB1	96	93.750	ENSEASG00005014739	TRUB1	99	93.410	Equus_asinus_asinus
ENSCSAG00000004891	TRUB1	96	93.750	ENSECAG00000007177	TRUB1	99	93.410	Equus_caballus
ENSCSAG00000004891	TRUB1	99	76.257	ENSEEUG00000013993	TRUB1	99	77.654	Erinaceus_europaeus
ENSCSAG00000004891	TRUB1	70	69.796	ENSELUG00000000502	trub1	86	69.796	Esox_lucius
ENSCSAG00000004891	TRUB1	86	96.000	ENSFCAG00000031927	TRUB1	99	92.529	Felis_catus
ENSCSAG00000004891	TRUB1	69	76.250	ENSFALG00000002232	TRUB1	92	76.250	Ficedula_albicollis
ENSCSAG00000004891	TRUB1	69	87.654	ENSFDAG00000008140	TRUB1	99	87.654	Fukomys_damarensis
ENSCSAG00000004891	TRUB1	70	66.531	ENSFHEG00000004016	trub1	84	66.531	Fundulus_heteroclitus
ENSCSAG00000004891	TRUB1	78	75.000	ENSGALG00000009091	TRUB1	97	74.057	Gallus_gallus
ENSCSAG00000004891	TRUB1	69	64.344	ENSGAFG00000009193	trub1	86	64.344	Gambusia_affinis
ENSCSAG00000004891	TRUB1	56	68.205	ENSGACG00000015387	trub1	96	68.205	Gasterosteus_aculeatus
ENSCSAG00000004891	TRUB1	92	72.274	ENSGAGG00000009758	TRUB1	81	78.092	Gopherus_agassizii
ENSCSAG00000004891	TRUB1	100	98.286	ENSGGOG00000004583	TRUB1	100	98.286	Gorilla_gorilla
ENSCSAG00000004891	TRUB1	72	67.063	ENSHBUG00000016787	trub1	91	67.063	Haplochromis_burtoni
ENSCSAG00000004891	TRUB1	99	87.106	ENSHGLG00000015314	TRUB1	99	87.106	Heterocephalus_glaber_female
ENSCSAG00000004891	TRUB1	70	86.122	ENSHGLG00100009183	TRUB1	100	86.122	Heterocephalus_glaber_male
ENSCSAG00000004891	TRUB1	70	68.163	ENSHCOG00000017877	trub1	89	68.163	Hippocampus_comes
ENSCSAG00000004891	TRUB1	79	65.580	ENSIPUG00000017559	trub1	97	65.580	Ictalurus_punctatus
ENSCSAG00000004891	TRUB1	90	93.312	ENSSTOG00000003641	TRUB1	99	87.966	Ictidomys_tridecemlineatus
ENSCSAG00000004891	TRUB1	99	84.814	ENSJJAG00000011800	Trub1	99	84.527	Jaculus_jaculus
ENSCSAG00000004891	TRUB1	72	65.759	ENSKMAG00000006232	trub1	92	65.759	Kryptolebias_marmoratus
ENSCSAG00000004891	TRUB1	70	68.293	ENSLBEG00000026722	trub1	92	64.286	Labrus_bergylta
ENSCSAG00000004891	TRUB1	79	72.826	ENSLACG00000014885	TRUB1	92	72.826	Latimeria_chalumnae
ENSCSAG00000004891	TRUB1	78	70.330	ENSLOCG00000012979	trub1	93	70.330	Lepisosteus_oculatus
ENSCSAG00000004891	TRUB1	100	79.888	ENSLAFG00000015452	TRUB1	100	80.726	Loxodonta_africana
ENSCSAG00000004891	TRUB1	100	99.143	ENSMFAG00000031767	TRUB1	100	99.143	Macaca_fascicularis
ENSCSAG00000004891	TRUB1	100	99.429	ENSMMUG00000001902	TRUB1	100	99.429	Macaca_mulatta
ENSCSAG00000004891	TRUB1	100	94.857	ENSMNEG00000044646	TRUB1	100	94.857	Macaca_nemestrina
ENSCSAG00000004891	TRUB1	100	99.429	ENSMLEG00000042655	TRUB1	100	99.429	Mandrillus_leucophaeus
ENSCSAG00000004891	TRUB1	72	67.063	ENSMZEG00005024095	trub1	91	67.063	Maylandia_zebra
ENSCSAG00000004891	TRUB1	78	74.265	ENSMGAG00000011135	TRUB1	93	74.265	Meleagris_gallopavo
ENSCSAG00000004891	TRUB1	85	85.570	ENSMAUG00000011101	Trub1	88	85.619	Mesocricetus_auratus
ENSCSAG00000004891	TRUB1	99	94.842	ENSMICG00000016324	TRUB1	99	94.842	Microcebus_murinus
ENSCSAG00000004891	TRUB1	91	83.077	ENSMOCG00000017759	Trub1	90	87.584	Microtus_ochrogaster
ENSCSAG00000004891	TRUB1	82	83.217	ENSMODG00000009676	TRUB1	81	81.419	Monodelphis_domestica
ENSCSAG00000004891	TRUB1	99	81.089	MGP_CAROLIEiJ_G0023100	Trub1	99	79.943	Mus_caroli
ENSCSAG00000004891	TRUB1	99	79.943	ENSMUSG00000025086	Trub1	99	78.797	Mus_musculus
ENSCSAG00000004891	TRUB1	99	81.375	MGP_PahariEiJ_G0014588	Trub1	99	80.229	Mus_pahari
ENSCSAG00000004891	TRUB1	99	80.229	MGP_SPRETEiJ_G0024021	Trub1	99	79.083	Mus_spretus
ENSCSAG00000004891	TRUB1	86	98.007	ENSMPUG00000003556	TRUB1	99	95.129	Mustela_putorius_furo
ENSCSAG00000004891	TRUB1	96	88.657	ENSMLUG00000017686	TRUB1	100	86.610	Myotis_lucifugus
ENSCSAG00000004891	TRUB1	99	85.673	ENSNGAG00000018682	Trub1	99	85.673	Nannospalax_galili
ENSCSAG00000004891	TRUB1	70	68.293	ENSNBRG00000023393	trub1	88	68.293	Neolamprologus_brichardi
ENSCSAG00000004891	TRUB1	100	98.286	ENSNLEG00000016345	TRUB1	100	98.286	Nomascus_leucogenys
ENSCSAG00000004891	TRUB1	57	91.045	ENSMEUG00000006603	TRUB1	78	88.152	Notamacropus_eugenii
ENSCSAG00000004891	TRUB1	86	86.047	ENSOPRG00000009371	TRUB1	87	85.953	Ochotona_princeps
ENSCSAG00000004891	TRUB1	99	85.100	ENSODEG00000010854	TRUB1	99	85.100	Octodon_degus
ENSCSAG00000004891	TRUB1	70	67.886	ENSONIG00000007249	trub1	89	67.886	Oreochromis_niloticus
ENSCSAG00000004891	TRUB1	78	80.292	ENSOANG00000001556	TRUB1	93	78.092	Ornithorhynchus_anatinus
ENSCSAG00000004891	TRUB1	86	89.037	ENSOCUG00000009456	TRUB1	99	83.668	Oryctolagus_cuniculus
ENSCSAG00000004891	TRUB1	69	69.295	ENSORLG00000029719	trub1	86	69.295	Oryzias_latipes
ENSCSAG00000004891	TRUB1	69	68.880	ENSORLG00020016767	trub1	85	68.880	Oryzias_latipes_hni
ENSCSAG00000004891	TRUB1	69	68.880	ENSORLG00015014728	trub1	86	68.880	Oryzias_latipes_hsok
ENSCSAG00000004891	TRUB1	74	66.409	ENSOMEG00000014556	trub1	85	68.595	Oryzias_melastigma
ENSCSAG00000004891	TRUB1	99	93.983	ENSOGAG00000015895	TRUB1	99	93.983	Otolemur_garnettii
ENSCSAG00000004891	TRUB1	84	94.371	ENSOARG00000015591	TRUB1	99	88.483	Ovis_aries
ENSCSAG00000004891	TRUB1	100	98.286	ENSPPAG00000043645	TRUB1	100	98.286	Pan_paniscus
ENSCSAG00000004891	TRUB1	96	92.537	ENSPPRG00000007096	TRUB1	99	91.954	Panthera_pardus
ENSCSAG00000004891	TRUB1	96	92.836	ENSPTIG00000006378	TRUB1	99	92.241	Panthera_tigris_altaica
ENSCSAG00000004891	TRUB1	100	98.286	ENSPTRG00000002964	TRUB1	100	98.286	Pan_troglodytes
ENSCSAG00000004891	TRUB1	100	99.429	ENSPANG00000020712	TRUB1	100	99.429	Papio_anubis
ENSCSAG00000004891	TRUB1	78	77.206	ENSPSIG00000012877	TRUB1	93	77.206	Pelodiscus_sinensis
ENSCSAG00000004891	TRUB1	70	66.122	ENSPMGG00000000075	trub1	88	66.122	Periophthalmus_magnuspinnatus
ENSCSAG00000004891	TRUB1	86	85.667	ENSPEMG00000011156	Trub1	88	85.906	Peromyscus_maniculatus_bairdii
ENSCSAG00000004891	TRUB1	82	82.517	ENSPCIG00000009729	TRUB1	79	81.507	Phascolarctos_cinereus
ENSCSAG00000004891	TRUB1	70	66.122	ENSPFOG00000009950	trub1	90	66.122	Poecilia_formosa
ENSCSAG00000004891	TRUB1	70	66.122	ENSPLAG00000013855	trub1	86	66.122	Poecilia_latipinna
ENSCSAG00000004891	TRUB1	70	66.122	ENSPMEG00000009064	trub1	88	66.122	Poecilia_mexicana
ENSCSAG00000004891	TRUB1	70	66.939	ENSPREG00000003343	trub1	88	66.939	Poecilia_reticulata
ENSCSAG00000004891	TRUB1	100	98.000	ENSPPYG00000002676	TRUB1	100	98.000	Pongo_abelii
ENSCSAG00000004891	TRUB1	100	76.204	ENSPCAG00000008427	TRUB1	100	76.487	Procavia_capensis
ENSCSAG00000004891	TRUB1	99	90.544	ENSPCOG00000024360	TRUB1	99	90.544	Propithecus_coquereli
ENSCSAG00000004891	TRUB1	75	93.182	ENSPVAG00000007575	TRUB1	100	93.182	Pteropus_vampyrus
ENSCSAG00000004891	TRUB1	72	67.063	ENSPNYG00000018614	trub1	91	67.063	Pundamilia_nyererei
ENSCSAG00000004891	TRUB1	74	59.231	ENSPNAG00000006881	trub1	88	58.088	Pygocentrus_nattereri
ENSCSAG00000004891	TRUB1	99	81.662	ENSRNOG00000017321	Trub1	99	80.516	Rattus_norvegicus
ENSCSAG00000004891	TRUB1	100	89.429	ENSRBIG00000033423	TRUB1	100	89.429	Rhinopithecus_bieti
ENSCSAG00000004891	TRUB1	100	99.143	ENSRROG00000033902	TRUB1	100	99.143	Rhinopithecus_roxellana
ENSCSAG00000004891	TRUB1	100	96.866	ENSSBOG00000024237	TRUB1	100	96.866	Saimiri_boliviensis_boliviensis
ENSCSAG00000004891	TRUB1	73	81.250	ENSSHAG00000009346	TRUB1	86	81.250	Sarcophilus_harrisii
ENSCSAG00000004891	TRUB1	69	69.959	ENSSFOG00015022124	trub1	83	69.959	Scleropages_formosus
ENSCSAG00000004891	TRUB1	70	68.699	ENSSMAG00000001020	trub1	88	68.699	Scophthalmus_maximus
ENSCSAG00000004891	TRUB1	69	69.167	ENSSDUG00000016414	trub1	88	69.106	Seriola_dumerili
ENSCSAG00000004891	TRUB1	69	69.583	ENSSLDG00000015486	trub1	88	69.512	Seriola_lalandi_dorsalis
ENSCSAG00000004891	TRUB1	85	74.747	ENSSPUG00000001642	TRUB1	96	77.143	Sphenodon_punctatus
ENSCSAG00000004891	TRUB1	74	66.923	ENSSPAG00000001217	trub1	92	66.923	Stegastes_partitus
ENSCSAG00000004891	TRUB1	99	87.966	ENSSSCG00000010653	TRUB1	99	87.966	Sus_scrofa
ENSCSAG00000004891	TRUB1	77	75.926	ENSTGUG00000010971	TRUB1	97	75.735	Taeniopygia_guttata
ENSCSAG00000004891	TRUB1	72	77.470	ENSTBEG00000002880	TRUB1	99	77.470	Tupaia_belangeri
ENSCSAG00000004891	TRUB1	72	91.633	ENSTTRG00000005767	TRUB1	100	91.288	Tursiops_truncatus
ENSCSAG00000004891	TRUB1	96	94.940	ENSUAMG00000024876	TRUB1	99	94.269	Ursus_americanus
ENSCSAG00000004891	TRUB1	84	97.627	ENSUMAG00000002411	TRUB1	99	90.258	Ursus_maritimus
ENSCSAG00000004891	TRUB1	99	93.123	ENSVPAG00000005507	TRUB1	99	93.123	Vicugna_pacos
ENSCSAG00000004891	TRUB1	99	92.550	ENSVVUG00000010085	TRUB1	83	92.264	Vulpes_vulpes
ENSCSAG00000004891	TRUB1	78	66.176	ENSXETG00000023828	trub1	98	66.176	Xenopus_tropicalis
ENSCSAG00000004891	TRUB1	69	65.021	ENSXCOG00000017847	trub1	86	65.021	Xiphophorus_couchianus
ENSCSAG00000004891	TRUB1	70	65.306	ENSXMAG00000014701	trub1	88	65.306	Xiphophorus_maculatus