EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000005167 (Gene tree)
Gene ID: 103242964
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 104630 bases
Position: chr16:43613223-43717852
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000001487	Ago_hook	PF10427.9	9.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000003197	TNRC6C-201	5845	-	ENSCSAP00000001487	1935 (aa)	-	A0A0D9QYP8

Gene Model

Click here to download ENSCSAG00000005167's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000005167's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000005167	TNRC6C	98	34.709	ENSCSAG00000006021	TNRC6B	99	35.265
ENSCSAG00000005167	TNRC6C	99	43.137	ENSCSAG00000006561	TNRC6A	97	43.060

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000005167	TNRC6C	100	98.405	ENSG00000078687	TNRC6C	100	98.899	Homo_sapiens
ENSCSAG00000005167	TNRC6C	72	53.110	ENSAPOG00000019749	tnrc6c1	98	49.259	Acanthochromis_polyacanthus
ENSCSAG00000005167	TNRC6C	93	89.697	ENSAMEG00000013756	TNRC6C	99	89.456	Ailuropoda_melanoleuca
ENSCSAG00000005167	TNRC6C	93	48.441	ENSACIG00000008075	tnrc6c1	98	54.714	Amphilophus_citrinellus
ENSCSAG00000005167	TNRC6C	69	64.653	ENSAOCG00000023968	tnrc6c1	99	49.280	Amphiprion_ocellaris
ENSCSAG00000005167	TNRC6C	72	53.961	ENSAPEG00000009020	tnrc6c1	99	49.177	Amphiprion_percula
ENSCSAG00000005167	TNRC6C	99	86.819	ENSAPLG00000005456	TNRC6C	100	86.729	Anas_platyrhynchos
ENSCSAG00000005167	TNRC6C	99	86.542	ENSACAG00000016198	TNRC6C	98	86.977	Anolis_carolinensis
ENSCSAG00000005167	TNRC6C	100	97.684	ENSANAG00000021554	TNRC6C	100	97.684	Aotus_nancymaae
ENSCSAG00000005167	TNRC6C	93	48.466	ENSACLG00000000424	tnrc6c1	99	48.707	Astatotilapia_calliptera
ENSCSAG00000005167	TNRC6C	96	90.847	ENSBTAG00000018658	TNRC6C	100	87.970	Bos_taurus
ENSCSAG00000005167	TNRC6C	100	97.581	ENSCJAG00000019431	TNRC6C	100	97.581	Callithrix_jacchus
ENSCSAG00000005167	TNRC6C	99	91.327	ENSCAFG00000005224	TNRC6C	99	91.327	Canis_familiaris
ENSCSAG00000005167	TNRC6C	99	90.923	ENSCAFG00020006661	TNRC6C	99	90.923	Canis_lupus_dingo
ENSCSAG00000005167	TNRC6C	99	87.264	ENSCHIG00000026004	TNRC6C	98	87.317	Capra_hircus
ENSCSAG00000005167	TNRC6C	89	96.000	ENSTSYG00000005403	TNRC6C	100	96.000	Carlito_syrichta
ENSCSAG00000005167	TNRC6C	98	83.211	ENSCAPG00000007307	TNRC6C	99	83.342	Cavia_aperea
ENSCSAG00000005167	TNRC6C	99	88.337	ENSCPOG00000000467	TNRC6C	99	88.598	Cavia_porcellus
ENSCSAG00000005167	TNRC6C	100	97.735	ENSCCAG00000030524	TNRC6C	100	98.319	Cebus_capucinus
ENSCSAG00000005167	TNRC6C	100	99.228	ENSCATG00000033135	TNRC6C	100	99.710	Cercocebus_atys
ENSCSAG00000005167	TNRC6C	99	90.857	ENSCLAG00000011139	TNRC6C	99	90.795	Chinchilla_lanigera
ENSCSAG00000005167	TNRC6C	70	86.527	ENSCHOG00000000088	TNRC6C	75	85.498	Choloepus_hoffmanni
ENSCSAG00000005167	TNRC6C	93	86.399	ENSCPBG00000027960	TNRC6C	100	86.003	Chrysemys_picta_bellii
ENSCSAG00000005167	TNRC6C	100	98.610	ENSCANG00000041771	TNRC6C	100	98.957	Colobus_angolensis_palliatus
ENSCSAG00000005167	TNRC6C	99	87.240	ENSCGRG00001022686	Tnrc6c	100	86.728	Cricetulus_griseus_chok1gshd
ENSCSAG00000005167	TNRC6C	99	87.572	ENSCGRG00000018041	Tnrc6c	100	86.728	Cricetulus_griseus_crigri
ENSCSAG00000005167	TNRC6C	72	52.071	ENSCSEG00000012744	tnrc6c1	98	47.290	Cynoglossus_semilaevis
ENSCSAG00000005167	TNRC6C	99	50.616	ENSDARG00000076847	tnrc6c1	99	54.226	Danio_rerio
ENSCSAG00000005167	TNRC6C	99	89.405	ENSDNOG00000003247	TNRC6C	99	89.405	Dasypus_novemcinctus
ENSCSAG00000005167	TNRC6C	99	83.664	ENSDORG00000004558	Tnrc6c	100	84.035	Dipodomys_ordii
ENSCSAG00000005167	TNRC6C	83	80.235	ENSETEG00000005527	TNRC6C	89	80.681	Echinops_telfairi
ENSCSAG00000005167	TNRC6C	89	89.108	ENSEASG00005004799	TNRC6C	100	89.108	Equus_asinus_asinus
ENSCSAG00000005167	TNRC6C	99	90.985	ENSECAG00000012486	TNRC6C	99	90.723	Equus_caballus
ENSCSAG00000005167	TNRC6C	88	92.203	ENSEEUG00000010008	TNRC6C	96	92.203	Erinaceus_europaeus
ENSCSAG00000005167	TNRC6C	99	88.150	ENSFCAG00000028358	TNRC6C	99	88.098	Felis_catus
ENSCSAG00000005167	TNRC6C	89	87.011	ENSFALG00000000848	TNRC6C	100	86.330	Ficedula_albicollis
ENSCSAG00000005167	TNRC6C	92	89.628	ENSFDAG00000010368	TNRC6C	99	90.023	Fukomys_damarensis
ENSCSAG00000005167	TNRC6C	67	69.505	ENSFHEG00000002936	tnrc6c1	99	48.287	Fundulus_heteroclitus
ENSCSAG00000005167	TNRC6C	93	89.068	ENSGALG00000001725	TNRC6C	99	88.901	Gallus_gallus
ENSCSAG00000005167	TNRC6C	99	47.419	ENSGAFG00000019019	tnrc6c1	100	48.212	Gambusia_affinis
ENSCSAG00000005167	TNRC6C	95	52.391	ENSGACG00000012320	tnrc6c1	97	47.739	Gasterosteus_aculeatus
ENSCSAG00000005167	TNRC6C	93	87.799	ENSGAGG00000022043	TNRC6C	99	87.652	Gopherus_agassizii
ENSCSAG00000005167	TNRC6C	100	97.840	ENSGGOG00000011304	TNRC6C	100	98.262	Gorilla_gorilla
ENSCSAG00000005167	TNRC6C	97	45.941	ENSHBUG00000010846	tnrc6c1	99	48.832	Haplochromis_burtoni
ENSCSAG00000005167	TNRC6C	99	90.225	ENSHGLG00000004809	TNRC6C	99	90.173	Heterocephalus_glaber_female
ENSCSAG00000005167	TNRC6C	99	89.328	ENSHGLG00100012597	TNRC6C	99	89.537	Heterocephalus_glaber_male
ENSCSAG00000005167	TNRC6C	99	51.111	ENSIPUG00000000818	tnrc6c1	98	51.813	Ictalurus_punctatus
ENSCSAG00000005167	TNRC6C	99	88.970	ENSSTOG00000009101	TNRC6C	99	89.189	Ictidomys_tridecemlineatus
ENSCSAG00000005167	TNRC6C	99	86.576	ENSJJAG00000017055	Tnrc6c	99	86.524	Jaculus_jaculus
ENSCSAG00000005167	TNRC6C	99	48.181	ENSKMAG00000021023	tnrc6c1	100	49.549	Kryptolebias_marmoratus
ENSCSAG00000005167	TNRC6C	92	74.484	ENSLACG00000015283	TNRC6C	99	74.511	Latimeria_chalumnae
ENSCSAG00000005167	TNRC6C	99	55.147	ENSLOCG00000013377	tnrc6c1	99	55.773	Lepisosteus_oculatus
ENSCSAG00000005167	TNRC6C	99	88.976	ENSLAFG00000011122	TNRC6C	99	88.646	Loxodonta_africana
ENSCSAG00000005167	TNRC6C	99	99.322	ENSMFAG00000043943	TNRC6C	100	99.826	Macaca_fascicularis
ENSCSAG00000005167	TNRC6C	100	99.793	ENSMMUG00000011924	TNRC6C	98	99.793	Macaca_mulatta
ENSCSAG00000005167	TNRC6C	100	99.331	ENSMNEG00000030405	TNRC6C	100	99.331	Macaca_nemestrina
ENSCSAG00000005167	TNRC6C	100	99.331	ENSMLEG00000033436	TNRC6C	100	99.768	Mandrillus_leucophaeus
ENSCSAG00000005167	TNRC6C	95	53.909	ENSMAMG00000023613	tnrc6c1	100	51.258	Mastacembelus_armatus
ENSCSAG00000005167	TNRC6C	97	46.957	ENSMZEG00005010920	tnrc6c1	99	48.707	Maylandia_zebra
ENSCSAG00000005167	TNRC6C	99	80.757	ENSMGAG00000003906	TNRC6C	100	80.893	Meleagris_gallopavo
ENSCSAG00000005167	TNRC6C	89	87.651	ENSMAUG00000021618	Tnrc6c	100	87.536	Mesocricetus_auratus
ENSCSAG00000005167	TNRC6C	99	93.958	ENSMICG00000003952	TNRC6C	100	94.261	Microcebus_murinus
ENSCSAG00000005167	TNRC6C	99	89.375	ENSMOCG00000015879	Tnrc6c	99	89.628	Microtus_ochrogaster
ENSCSAG00000005167	TNRC6C	70	54.565	ENSMMOG00000005203	tnrc6c1	100	49.418	Mola_mola
ENSCSAG00000005167	TNRC6C	99	85.127	ENSMODG00000001785	TNRC6C	99	84.815	Monodelphis_domestica
ENSCSAG00000005167	TNRC6C	99	88.542	MGP_CAROLIEiJ_G0017465	Tnrc6c	99	89.121	Mus_caroli
ENSCSAG00000005167	TNRC6C	99	88.281	ENSMUSG00000025571	Tnrc6c	99	88.895	Mus_musculus
ENSCSAG00000005167	TNRC6C	99	88.281	MGP_PahariEiJ_G0018593	Tnrc6c	99	88.839	Mus_pahari
ENSCSAG00000005167	TNRC6C	99	88.373	MGP_SPRETEiJ_G0018309	Tnrc6c	99	88.952	Mus_spretus
ENSCSAG00000005167	TNRC6C	99	88.831	ENSMPUG00000013348	TNRC6C	98	88.871	Mustela_putorius_furo
ENSCSAG00000005167	TNRC6C	99	81.884	ENSMLUG00000014431	TNRC6C	98	82.283	Myotis_lucifugus
ENSCSAG00000005167	TNRC6C	99	88.802	ENSNGAG00000012203	Tnrc6c	99	88.698	Nannospalax_galili
ENSCSAG00000005167	TNRC6C	93	49.067	ENSNBRG00000005344	tnrc6c1	99	49.282	Neolamprologus_brichardi
ENSCSAG00000005167	TNRC6C	99	94.995	ENSNLEG00000000047	TNRC6C	99	94.995	Nomascus_leucogenys
ENSCSAG00000005167	TNRC6C	89	80.035	ENSMEUG00000005104	TNRC6C	99	90.104	Notamacropus_eugenii
ENSCSAG00000005167	TNRC6C	89	90.377	ENSODEG00000012499	TNRC6C	100	90.551	Octodon_degus
ENSCSAG00000005167	TNRC6C	84	50.178	ENSONIG00000002210	tnrc6c1	96	52.413	Oreochromis_niloticus
ENSCSAG00000005167	TNRC6C	99	60.679	ENSOANG00000009758	-	100	60.587	Ornithorhynchus_anatinus
ENSCSAG00000005167	TNRC6C	80	88.596	ENSOCUG00000006122	TNRC6C	95	81.202	Oryctolagus_cuniculus
ENSCSAG00000005167	TNRC6C	93	46.795	ENSORLG00000009837	tnrc6c1	100	67.286	Oryzias_latipes
ENSCSAG00000005167	TNRC6C	93	47.567	ENSORLG00020016510	tnrc6c1	100	49.130	Oryzias_latipes_hni
ENSCSAG00000005167	TNRC6C	74	43.063	ENSORLG00015000171	tnrc6c1	98	44.921	Oryzias_latipes_hsok
ENSCSAG00000005167	TNRC6C	93	48.369	ENSOMEG00000000357	tnrc6c1	99	48.477	Oryzias_melastigma
ENSCSAG00000005167	TNRC6C	89	93.217	ENSOGAG00000007197	TNRC6C	100	93.217	Otolemur_garnettii
ENSCSAG00000005167	TNRC6C	95	84.883	ENSOARG00000006041	TNRC6C	97	85.205	Ovis_aries
ENSCSAG00000005167	TNRC6C	99	97.922	ENSPPAG00000027160	TNRC6C	100	98.841	Pan_paniscus
ENSCSAG00000005167	TNRC6C	99	88.150	ENSPPRG00000018881	TNRC6C	99	88.098	Panthera_pardus
ENSCSAG00000005167	TNRC6C	88	85.676	ENSPTIG00000008791	TNRC6C	89	86.133	Panthera_tigris_altaica
ENSCSAG00000005167	TNRC6C	100	98.353	ENSPTRG00000009699	TNRC6C	100	98.841	Pan_troglodytes
ENSCSAG00000005167	TNRC6C	100	99.331	ENSPANG00000019994	TNRC6C	100	99.331	Papio_anubis
ENSCSAG00000005167	TNRC6C	86	52.722	ENSPKIG00000005428	tnrc6c1	100	51.410	Paramormyrops_kingsleyae
ENSCSAG00000005167	TNRC6C	92	84.317	ENSPSIG00000018069	TNRC6C	99	84.261	Pelodiscus_sinensis
ENSCSAG00000005167	TNRC6C	66	57.505	ENSPMGG00000022911	tnrc6c1	97	62.857	Periophthalmus_magnuspinnatus
ENSCSAG00000005167	TNRC6C	99	88.802	ENSPEMG00000009785	Tnrc6c	99	88.802	Peromyscus_maniculatus_bairdii
ENSCSAG00000005167	TNRC6C	50	86.420	ENSPCIG00000017421	-	99	86.008	Phascolarctos_cinereus
ENSCSAG00000005167	TNRC6C	96	47.897	ENSPFOG00000012560	tnrc6c1	97	57.322	Poecilia_formosa
ENSCSAG00000005167	TNRC6C	89	50.000	ENSPLAG00000021055	tnrc6c1	100	49.916	Poecilia_latipinna
ENSCSAG00000005167	TNRC6C	100	99.018	ENSPPYG00000008679	TNRC6C	99	99.018	Pongo_abelii
ENSCSAG00000005167	TNRC6C	86	84.816	ENSPCAG00000012510	TNRC6C	94	84.599	Procavia_capensis
ENSCSAG00000005167	TNRC6C	89	94.841	ENSPCOG00000021451	TNRC6C	100	94.841	Propithecus_coquereli
ENSCSAG00000005167	TNRC6C	88	88.983	ENSPVAG00000002008	TNRC6C	95	88.983	Pteropus_vampyrus
ENSCSAG00000005167	TNRC6C	93	48.278	ENSPNYG00000014477	tnrc6c1	99	48.520	Pundamilia_nyererei
ENSCSAG00000005167	TNRC6C	89	88.419	ENSRNOG00000022395	Tnrc6c	100	88.419	Rattus_norvegicus
ENSCSAG00000005167	TNRC6C	99	98.903	ENSRBIG00000027777	TNRC6C	100	99.304	Rhinopithecus_bieti
ENSCSAG00000005167	TNRC6C	100	98.971	ENSRROG00000042912	TNRC6C	100	99.362	Rhinopithecus_roxellana
ENSCSAG00000005167	TNRC6C	100	97.324	ENSSBOG00000023981	TNRC6C	100	97.913	Saimiri_boliviensis_boliviensis
ENSCSAG00000005167	TNRC6C	75	56.554	ENSSFOG00015004735	-	99	59.398	Scleropages_formosus
ENSCSAG00000005167	TNRC6C	91	57.572	ENSSFOG00015006475	tnrc6c1	99	51.859	Scleropages_formosus
ENSCSAG00000005167	TNRC6C	92	47.007	ENSSMAG00000012761	tnrc6c1	99	49.465	Scophthalmus_maximus
ENSCSAG00000005167	TNRC6C	93	48.726	ENSSDUG00000002366	tnrc6c1	99	49.735	Seriola_dumerili
ENSCSAG00000005167	TNRC6C	89	47.930	ENSSLDG00000025613	tnrc6c1	100	48.859	Seriola_lalandi_dorsalis
ENSCSAG00000005167	TNRC6C	84	88.235	ENSSARG00000006816	TNRC6C	91	88.235	Sorex_araneus
ENSCSAG00000005167	TNRC6C	80	86.875	ENSSPUG00000007341	TNRC6C	98	86.389	Sphenodon_punctatus
ENSCSAG00000005167	TNRC6C	70	54.021	ENSSPAG00000014977	tnrc6c1	97	49.374	Stegastes_partitus
ENSCSAG00000005167	TNRC6C	86	90.722	ENSSSCG00000034373	TNRC6C	100	85.516	Sus_scrofa
ENSCSAG00000005167	TNRC6C	92	86.622	ENSTGUG00000007733	TNRC6C	99	86.453	Taeniopygia_guttata
ENSCSAG00000005167	TNRC6C	70	54.916	ENSTRUG00000011685	tnrc6c1	100	49.779	Takifugu_rubripes
ENSCSAG00000005167	TNRC6C	88	52.912	ENSTNIG00000005273	tnrc6c1	100	60.882	Tetraodon_nigroviridis
ENSCSAG00000005167	TNRC6C	61	79.422	ENSTBEG00000005046	TNRC6C	100	79.677	Tupaia_belangeri
ENSCSAG00000005167	TNRC6C	92	88.758	ENSTTRG00000010828	TNRC6C	99	88.758	Tursiops_truncatus
ENSCSAG00000005167	TNRC6C	99	88.958	ENSUMAG00000013614	TNRC6C	99	89.184	Ursus_maritimus
ENSCSAG00000005167	TNRC6C	89	89.809	ENSVVUG00000015268	TNRC6C	100	89.751	Vulpes_vulpes
ENSCSAG00000005167	TNRC6C	89	73.464	ENSXETG00000019470	tnrc6c	100	73.119	Xenopus_tropicalis
ENSCSAG00000005167	TNRC6C	96	48.118	ENSXMAG00000025971	tnrc6c1	100	48.022	Xiphophorus_maculatus