EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000005252 (Gene tree)
Gene ID: 103235594
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 37859 bases
Position: chr7:633172-671030
Accession: 103235594
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000001564	YTH	PF04146.15	7e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000003284	YTHDC1-201	4337	-	ENSCSAP00000001564	728 (aa)	XP_007996757	A0A0D9QYX5

Gene Model

Click here to download ENSCSAG00000005252's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000005252's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000005252	YTHDC1	100	99.588	ENSG00000083896	YTHDC1	100	100.000	Homo_sapiens
ENSCSAG00000005252	YTHDC1	57	59.759	ENSAPOG00000013997	ythdc1	57	62.768	Acanthochromis_polyacanthus
ENSCSAG00000005252	YTHDC1	100	97.538	ENSAMEG00000005688	YTHDC1	100	97.538	Ailuropoda_melanoleuca
ENSCSAG00000005252	YTHDC1	71	58.513	ENSACIG00000019728	ythdc1	80	60.048	Amphilophus_citrinellus
ENSCSAG00000005252	YTHDC1	57	61.468	ENSAOCG00000000239	ythdc1	59	67.198	Amphiprion_ocellaris
ENSCSAG00000005252	YTHDC1	91	84.962	ENSAPLG00000009921	YTHDC1	60	96.659	Anas_platyrhynchos
ENSCSAG00000005252	YTHDC1	93	83.704	ENSACAG00000009697	YTHDC1	93	83.556	Anolis_carolinensis
ENSCSAG00000005252	YTHDC1	100	99.176	ENSANAG00000001522	YTHDC1	100	99.176	Aotus_nancymaae
ENSCSAG00000005252	YTHDC1	57	59.633	ENSACLG00000019371	ythdc1	59	66.362	Astatotilapia_calliptera
ENSCSAG00000005252	YTHDC1	93	64.553	ENSAMXG00000006978	ythdc1	92	66.040	Astyanax_mexicanus
ENSCSAG00000005252	YTHDC1	100	97.394	ENSBTAG00000015572	YTHDC1	100	97.394	Bos_taurus
ENSCSAG00000005252	YTHDC1	100	99.588	ENSCJAG00000009934	YTHDC1	100	99.588	Callithrix_jacchus
ENSCSAG00000005252	YTHDC1	100	97.538	ENSCAFG00000002821	YTHDC1	100	97.538	Canis_familiaris
ENSCSAG00000005252	YTHDC1	100	97.538	ENSCAFG00020027112	YTHDC1	100	97.538	Canis_lupus_dingo
ENSCSAG00000005252	YTHDC1	91	86.627	ENSCHIG00000004810	YTHDC1	95	93.346	Capra_hircus
ENSCSAG00000005252	YTHDC1	100	98.901	ENSTSYG00000011668	YTHDC1	100	98.901	Carlito_syrichta
ENSCSAG00000005252	YTHDC1	90	69.453	ENSCAPG00000008722	YTHDC1	90	68.872	Cavia_aperea
ENSCSAG00000005252	YTHDC1	100	91.071	ENSCPOG00000010929	YTHDC1	100	91.071	Cavia_porcellus
ENSCSAG00000005252	YTHDC1	100	99.313	ENSCCAG00000035754	YTHDC1	100	99.313	Cebus_capucinus
ENSCSAG00000005252	YTHDC1	100	98.641	ENSCATG00000036320	YTHDC1	100	98.641	Cercocebus_atys
ENSCSAG00000005252	YTHDC1	99	96.556	ENSCLAG00000005482	YTHDC1	99	96.556	Chinchilla_lanigera
ENSCSAG00000005252	YTHDC1	92	86.458	ENSCPBG00000021965	YTHDC1	94	87.057	Chrysemys_picta_bellii
ENSCSAG00000005252	YTHDC1	100	99.863	ENSCANG00000004769	YTHDC1	100	99.863	Colobus_angolensis_palliatus
ENSCSAG00000005252	YTHDC1	100	96.332	ENSCGRG00001000816	Ythdc1	100	96.332	Cricetulus_griseus_chok1gshd
ENSCSAG00000005252	YTHDC1	99	97.357	ENSCGRG00000009807	Ythdc1	99	97.357	Cricetulus_griseus_crigri
ENSCSAG00000005252	YTHDC1	57	60.352	ENSCSEG00000020404	ythdc1	59	66.210	Cynoglossus_semilaevis
ENSCSAG00000005252	YTHDC1	57	59.424	ENSCVAG00000022349	ythdc1	59	65.367	Cyprinodon_variegatus
ENSCSAG00000005252	YTHDC1	93	63.557	ENSDARG00000051953	ythdc1	58	77.882	Danio_rerio
ENSCSAG00000005252	YTHDC1	100	96.708	ENSDNOG00000004949	YTHDC1	100	96.708	Dasypus_novemcinctus
ENSCSAG00000005252	YTHDC1	99	98.609	ENSDORG00000013045	Ythdc1	100	98.609	Dipodomys_ordii
ENSCSAG00000005252	YTHDC1	78	100.000	ENSETEG00000001878	YTHDC1	70	100.000	Echinops_telfairi
ENSCSAG00000005252	YTHDC1	100	98.085	ENSEASG00005018383	YTHDC1	100	98.085	Equus_asinus_asinus
ENSCSAG00000005252	YTHDC1	100	97.674	ENSECAG00000018303	YTHDC1	100	97.674	Equus_caballus
ENSCSAG00000005252	YTHDC1	100	96.708	ENSEEUG00000015466	YTHDC1	100	96.708	Erinaceus_europaeus
ENSCSAG00000005252	YTHDC1	93	61.756	ENSELUG00000014029	ythdc1	57	76.225	Esox_lucius
ENSCSAG00000005252	YTHDC1	100	97.397	ENSFCAG00000026791	YTHDC1	100	97.397	Felis_catus
ENSCSAG00000005252	YTHDC1	68	89.679	ENSFALG00000006581	YTHDC1	87	93.917	Ficedula_albicollis
ENSCSAG00000005252	YTHDC1	99	97.632	ENSFDAG00000018560	YTHDC1	100	97.632	Fukomys_damarensis
ENSCSAG00000005252	YTHDC1	65	58.730	ENSFHEG00000001286	ythdc1	60	56.325	Fundulus_heteroclitus
ENSCSAG00000005252	YTHDC1	63	64.184	ENSGMOG00000018815	ythdc1	78	64.184	Gadus_morhua
ENSCSAG00000005252	YTHDC1	92	85.693	ENSGALG00000035906	YTHDC1	85	83.158	Gallus_gallus
ENSCSAG00000005252	YTHDC1	51	65.233	ENSGAFG00000001759	ythdc1	54	67.391	Gambusia_affinis
ENSCSAG00000005252	YTHDC1	57	62.383	ENSGACG00000015486	ythdc1	57	62.731	Gasterosteus_aculeatus
ENSCSAG00000005252	YTHDC1	93	85.359	ENSGAGG00000007108	YTHDC1	93	85.359	Gopherus_agassizii
ENSCSAG00000005252	YTHDC1	100	98.641	ENSGGOG00000021958	YTHDC1	100	98.641	Gorilla_gorilla
ENSCSAG00000005252	YTHDC1	57	59.633	ENSHBUG00000019288	ythdc1	59	66.362	Haplochromis_burtoni
ENSCSAG00000005252	YTHDC1	94	71.283	ENSHGLG00000003239	-	57	78.947	Heterocephalus_glaber_female
ENSCSAG00000005252	YTHDC1	100	96.467	ENSHGLG00000006319	-	100	96.467	Heterocephalus_glaber_female
ENSCSAG00000005252	YTHDC1	100	96.585	ENSHGLG00100001556	-	100	96.585	Heterocephalus_glaber_male
ENSCSAG00000005252	YTHDC1	94	69.811	ENSHGLG00100008060	-	57	76.485	Heterocephalus_glaber_male
ENSCSAG00000005252	YTHDC1	53	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSCSAG00000005252	YTHDC1	93	67.442	ENSIPUG00000018136	ythdc1	61	83.759	Ictalurus_punctatus
ENSCSAG00000005252	YTHDC1	100	97.962	ENSSTOG00000013652	YTHDC1	100	97.962	Ictidomys_tridecemlineatus
ENSCSAG00000005252	YTHDC1	91	91.382	ENSJJAG00000010268	Ythdc1	93	92.125	Jaculus_jaculus
ENSCSAG00000005252	YTHDC1	57	60.502	ENSKMAG00000006483	ythdc1	85	65.533	Kryptolebias_marmoratus
ENSCSAG00000005252	YTHDC1	64	63.462	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSCSAG00000005252	YTHDC1	87	73.981	ENSLACG00000004893	YTHDC1	92	73.906	Latimeria_chalumnae
ENSCSAG00000005252	YTHDC1	93	73.560	ENSLOCG00000003045	ythdc1	92	88.702	Lepisosteus_oculatus
ENSCSAG00000005252	YTHDC1	100	95.788	ENSLAFG00000021592	YTHDC1	100	95.788	Loxodonta_africana
ENSCSAG00000005252	YTHDC1	100	98.777	ENSMFAG00000031927	YTHDC1	100	98.777	Macaca_fascicularis
ENSCSAG00000005252	YTHDC1	100	99.863	ENSMMUG00000002265	YTHDC1	100	99.863	Macaca_mulatta
ENSCSAG00000005252	YTHDC1	100	99.863	ENSMNEG00000033751	YTHDC1	100	99.863	Macaca_nemestrina
ENSCSAG00000005252	YTHDC1	100	99.725	ENSMLEG00000042147	YTHDC1	100	99.725	Mandrillus_leucophaeus
ENSCSAG00000005252	YTHDC1	57	59.633	ENSMZEG00005023173	ythdc1	59	66.362	Maylandia_zebra
ENSCSAG00000005252	YTHDC1	93	84.296	ENSMGAG00000010391	YTHDC1	59	96.420	Meleagris_gallopavo
ENSCSAG00000005252	YTHDC1	100	96.196	ENSMAUG00000001286	Ythdc1	100	96.196	Mesocricetus_auratus
ENSCSAG00000005252	YTHDC1	100	97.151	ENSMICG00000034640	YTHDC1	100	97.151	Microcebus_murinus
ENSCSAG00000005252	YTHDC1	100	96.196	ENSMOCG00000020201	Ythdc1	100	96.196	Microtus_ochrogaster
ENSCSAG00000005252	YTHDC1	93	89.614	ENSMODG00000020754	-	92	88.576	Monodelphis_domestica
ENSCSAG00000005252	YTHDC1	87	69.476	ENSMODG00000014337	-	95	69.830	Monodelphis_domestica
ENSCSAG00000005252	YTHDC1	64	57.872	ENSMODG00000009173	-	88	61.594	Monodelphis_domestica
ENSCSAG00000005252	YTHDC1	96	51.641	ENSMODG00000010076	-	60	61.538	Monodelphis_domestica
ENSCSAG00000005252	YTHDC1	58	67.797	ENSMALG00000013412	ythdc1	56	68.378	Monopterus_albus
ENSCSAG00000005252	YTHDC1	93	95.697	MGP_CAROLIEiJ_G0027347	Ythdc1	97	92.687	Mus_caroli
ENSCSAG00000005252	YTHDC1	100	96.982	ENSMUSG00000035851	Ythdc1	100	96.982	Mus_musculus
ENSCSAG00000005252	YTHDC1	100	97.257	MGP_PahariEiJ_G0017126	Ythdc1	100	97.257	Mus_pahari
ENSCSAG00000005252	YTHDC1	100	97.257	MGP_SPRETEiJ_G0028339	Ythdc1	100	97.257	Mus_spretus
ENSCSAG00000005252	YTHDC1	93	73.167	ENSMPUG00000001743	YTHDC1	53	98.695	Mustela_putorius_furo
ENSCSAG00000005252	YTHDC1	99	97.493	ENSMLUG00000016300	YTHDC1	100	97.493	Myotis_lucifugus
ENSCSAG00000005252	YTHDC1	60	92.500	ENSNGAG00000024000	Ythdc1	93	92.500	Nannospalax_galili
ENSCSAG00000005252	YTHDC1	57	60.422	ENSNBRG00000007663	ythdc1	70	66.589	Neolamprologus_brichardi
ENSCSAG00000005252	YTHDC1	99	97.799	ENSNLEG00000009202	YTHDC1	99	97.799	Nomascus_leucogenys
ENSCSAG00000005252	YTHDC1	80	81.940	ENSMEUG00000007128	YTHDC1	81	81.940	Notamacropus_eugenii
ENSCSAG00000005252	YTHDC1	73	98.867	ENSOPRG00000008986	YTHDC1	74	98.867	Ochotona_princeps
ENSCSAG00000005252	YTHDC1	100	97.115	ENSODEG00000001715	YTHDC1	100	97.115	Octodon_degus
ENSCSAG00000005252	YTHDC1	57	60.092	ENSONIG00000012651	ythdc1	59	66.819	Oreochromis_niloticus
ENSCSAG00000005252	YTHDC1	88	75.841	ENSOANG00000014398	YTHDC1	55	95.443	Ornithorhynchus_anatinus
ENSCSAG00000005252	YTHDC1	93	81.832	ENSOCUG00000015886	YTHDC1	57	95.729	Oryctolagus_cuniculus
ENSCSAG00000005252	YTHDC1	57	60.230	ENSOMEG00000000551	ythdc1	60	64.516	Oryzias_melastigma
ENSCSAG00000005252	YTHDC1	100	97.802	ENSOGAG00000003362	YTHDC1	100	97.802	Otolemur_garnettii
ENSCSAG00000005252	YTHDC1	100	97.394	ENSOARG00000008633	YTHDC1	100	97.394	Ovis_aries
ENSCSAG00000005252	YTHDC1	100	98.505	ENSPPAG00000041315	YTHDC1	100	98.505	Pan_paniscus
ENSCSAG00000005252	YTHDC1	100	96.477	ENSPPRG00000011979	YTHDC1	100	96.477	Panthera_pardus
ENSCSAG00000005252	YTHDC1	99	96.154	ENSPTIG00000015527	YTHDC1	100	96.154	Panthera_tigris_altaica
ENSCSAG00000005252	YTHDC1	100	98.505	ENSPTRG00000016105	YTHDC1	100	98.505	Pan_troglodytes
ENSCSAG00000005252	YTHDC1	100	98.641	ENSPANG00000021590	YTHDC1	100	98.641	Papio_anubis
ENSCSAG00000005252	YTHDC1	93	69.287	ENSPKIG00000018497	ythdc1	93	68.795	Paramormyrops_kingsleyae
ENSCSAG00000005252	YTHDC1	91	86.787	ENSPSIG00000002782	YTHDC1	92	86.787	Pelodiscus_sinensis
ENSCSAG00000005252	YTHDC1	99	97.632	ENSPEMG00000013850	Ythdc1	100	97.632	Peromyscus_maniculatus_bairdii
ENSCSAG00000005252	YTHDC1	93	89.466	ENSPCIG00000006870	YTHDC1	92	88.427	Phascolarctos_cinereus
ENSCSAG00000005252	YTHDC1	57	59.545	ENSPLAG00000011079	ythdc1	85	65.217	Poecilia_latipinna
ENSCSAG00000005252	YTHDC1	57	59.712	ENSPREG00000016973	ythdc1	59	58.413	Poecilia_reticulata
ENSCSAG00000005252	YTHDC1	87	99.525	ENSPPYG00000014726	YTHDC1	100	99.525	Pongo_abelii
ENSCSAG00000005252	YTHDC1	77	89.545	ENSPCAG00000009607	YTHDC1	77	89.091	Procavia_capensis
ENSCSAG00000005252	YTHDC1	100	92.673	ENSPCOG00000019105	YTHDC1	100	92.673	Propithecus_coquereli
ENSCSAG00000005252	YTHDC1	93	92.171	ENSPVAG00000015551	YTHDC1	93	92.762	Pteropus_vampyrus
ENSCSAG00000005252	YTHDC1	57	59.633	ENSPNYG00000011687	ythdc1	59	66.362	Pundamilia_nyererei
ENSCSAG00000005252	YTHDC1	93	69.565	ENSPNAG00000028365	ythdc1	93	69.653	Pygocentrus_nattereri
ENSCSAG00000005252	YTHDC1	100	95.535	ENSRNOG00000001996	Ythdc1	100	95.535	Rattus_norvegicus
ENSCSAG00000005252	YTHDC1	99	97.524	ENSRBIG00000028279	YTHDC1	99	97.524	Rhinopithecus_bieti
ENSCSAG00000005252	YTHDC1	100	99.863	ENSRROG00000035028	YTHDC1	100	99.863	Rhinopithecus_roxellana
ENSCSAG00000005252	YTHDC1	100	98.505	ENSSBOG00000022353	YTHDC1	100	98.505	Saimiri_boliviensis_boliviensis
ENSCSAG00000005252	YTHDC1	93	88.427	ENSSHAG00000002538	YTHDC1	91	88.421	Sarcophilus_harrisii
ENSCSAG00000005252	YTHDC1	93	68.551	ENSSFOG00015003298	ythdc1	60	86.019	Scleropages_formosus
ENSCSAG00000005252	YTHDC1	56	60.314	ENSSMAG00000009086	ythdc1	60	65.525	Scophthalmus_maximus
ENSCSAG00000005252	YTHDC1	79	98.616	ENSSARG00000010960	YTHDC1	100	98.616	Sorex_araneus
ENSCSAG00000005252	YTHDC1	93	82.743	ENSSPUG00000009357	YTHDC1	62	95.962	Sphenodon_punctatus
ENSCSAG00000005252	YTHDC1	57	62.156	ENSSPAG00000011449	ythdc1	59	67.198	Stegastes_partitus
ENSCSAG00000005252	YTHDC1	99	96.819	ENSSSCG00000035505	YTHDC1	100	95.816	Sus_scrofa
ENSCSAG00000005252	YTHDC1	93	86.370	ENSTGUG00000004452	-	92	85.926	Taeniopygia_guttata
ENSCSAG00000005252	YTHDC1	63	61.224	ENSTRUG00000010142	ythdc1	69	70.000	Takifugu_rubripes
ENSCSAG00000005252	YTHDC1	86	60.304	ENSTNIG00000013243	ythdc1	89	65.581	Tetraodon_nigroviridis
ENSCSAG00000005252	YTHDC1	93	87.092	ENSTBEG00000011546	YTHDC1	92	87.685	Tupaia_belangeri
ENSCSAG00000005252	YTHDC1	100	96.580	ENSTTRG00000005083	YTHDC1	100	96.580	Tursiops_truncatus
ENSCSAG00000005252	YTHDC1	93	97.496	ENSUAMG00000010388	YTHDC1	100	97.496	Ursus_americanus
ENSCSAG00000005252	YTHDC1	99	84.006	ENSUMAG00000013668	YTHDC1	98	84.006	Ursus_maritimus
ENSCSAG00000005252	YTHDC1	100	95.330	ENSVPAG00000009040	YTHDC1	100	95.330	Vicugna_pacos
ENSCSAG00000005252	YTHDC1	99	96.438	ENSVVUG00000005387	YTHDC1	100	97.353	Vulpes_vulpes
ENSCSAG00000005252	YTHDC1	92	74.184	ENSXETG00000017960	ythdc1	91	72.090	Xenopus_tropicalis
ENSCSAG00000005252	YTHDC1	50	52.574	ENSXCOG00000000530	ythdc1	79	52.692	Xiphophorus_couchianus
ENSCSAG00000005252	YTHDC1	57	58.758	ENSXMAG00000005196	ythdc1	61	65.138	Xiphophorus_maculatus