EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000005633 (Gene tree)
Gene ID: 103242871
Gene Symbol: MSI2
Alias: -
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 422851 bases
Position: chr16:35719075-36141925
Accession: 103242871
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000001941	RRM_1	PF00076.22	2.3e-34	1	2
ENSCSAP00000001941	RRM_1	PF00076.22	2.3e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000003667	MSI2-201	1162	-	ENSCSAP00000001941	328 (aa)	XP_008009546	A0A0D9R002

Gene Model

Click here to download ENSCSAG00000005633's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000005633's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000005633	MSI2	52	42.690	ENSCSAG00000018616	-	54	42.690
ENSCSAG00000005633	MSI2	54	48.023	ENSCSAG00000004463	HNRNPD	66	40.741
ENSCSAG00000005633	MSI2	56	49.189	ENSCSAG00000004461	HNRNPDL	60	42.023
ENSCSAG00000005633	MSI2	53	40.698	ENSCSAG00000018870	-	59	39.560
ENSCSAG00000005633	MSI2	55	33.520	ENSCSAG00000011517	-	50	33.503
ENSCSAG00000005633	MSI2	53	40.698	ENSCSAG00000005140	-	58	40.698
ENSCSAG00000005633	MSI2	74	77.733	ENSCSAG00000002265	MSI1	85	77.733
ENSCSAG00000005633	MSI2	52	31.868	ENSCSAG00000019136	-	53	30.723
ENSCSAG00000005633	MSI2	52	42.775	ENSCSAG00000000499	HNRNPA0	60	42.308
ENSCSAG00000005633	MSI2	52	38.953	ENSCSAG00000000627	-	57	37.912
ENSCSAG00000005633	MSI2	54	37.222	ENSCSAG00000004770	-	67	37.222
ENSCSAG00000005633	MSI2	52	40.351	ENSCSAG00000010220	-	59	39.227
ENSCSAG00000005633	MSI2	57	49.198	ENSCSAG00000002626	-	68	49.198
ENSCSAG00000005633	MSI2	53	43.407	ENSCSAG00000014797	-	63	43.299
ENSCSAG00000005633	MSI2	53	39.535	ENSCSAG00000019724	-	54	39.535
ENSCSAG00000005633	MSI2	52	31.868	ENSCSAG00000000785	-	53	30.723
ENSCSAG00000005633	MSI2	51	44.595	ENSCSAG00000012245	CIRBP	55	44.595
ENSCSAG00000005633	MSI2	53	41.279	ENSCSAG00000014175	HNRNPA2B1	54	41.279

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000005633	MSI2	100	100.000	ENSG00000153944	MSI2	100	100.000	Homo_sapiens
ENSCSAG00000005633	MSI2	97	93.227	ENSAPOG00000001658	msi2a	100	88.110	Acanthochromis_polyacanthus
ENSCSAG00000005633	MSI2	94	94.462	ENSAMEG00000002697	MSI2	99	94.462	Ailuropoda_melanoleuca
ENSCSAG00000005633	MSI2	100	67.602	ENSACIG00000009475	msi2a	100	67.857	Amphilophus_citrinellus
ENSCSAG00000005633	MSI2	58	76.667	ENSAOCG00000014822	msi2a	69	76.667	Amphiprion_ocellaris
ENSCSAG00000005633	MSI2	100	88.110	ENSAPEG00000007706	msi2a	100	88.110	Amphiprion_percula
ENSCSAG00000005633	MSI2	97	93.227	ENSATEG00000010498	msi2a	100	88.110	Anabas_testudineus
ENSCSAG00000005633	MSI2	94	93.165	ENSATEG00000003301	-	100	93.165	Anabas_testudineus
ENSCSAG00000005633	MSI2	90	97.826	ENSACAG00000005452	MSI2	74	95.455	Anolis_carolinensis
ENSCSAG00000005633	MSI2	100	100.000	ENSANAG00000037827	MSI2	100	100.000	Aotus_nancymaae
ENSCSAG00000005633	MSI2	97	92.829	ENSACLG00000007752	msi2a	100	87.805	Astatotilapia_calliptera
ENSCSAG00000005633	MSI2	100	90.854	ENSAMXG00000010474	msi2b	95	96.091	Astyanax_mexicanus
ENSCSAG00000005633	MSI2	100	93.617	ENSAMXG00000032796	msi2a	100	91.793	Astyanax_mexicanus
ENSCSAG00000005633	MSI2	94	99.674	ENSBTAG00000004406	MSI2	97	99.674	Bos_taurus
ENSCSAG00000005633	MSI2	71	60.643	WBGene00003423	msi-1	76	60.643	Caenorhabditis_elegans
ENSCSAG00000005633	MSI2	100	100.000	ENSCJAG00000013998	MSI2	100	100.000	Callithrix_jacchus
ENSCSAG00000005633	MSI2	94	93.103	ENSCAFG00020025620	MSI2	81	93.103	Canis_lupus_dingo
ENSCSAG00000005633	MSI2	100	98.476	ENSCHIG00000016580	MSI2	100	98.476	Capra_hircus
ENSCSAG00000005633	MSI2	94	95.390	ENSCPOG00000034042	MSI2	99	95.390	Cavia_porcellus
ENSCSAG00000005633	MSI2	100	100.000	ENSCCAG00000033927	MSI2	100	100.000	Cebus_capucinus
ENSCSAG00000005633	MSI2	100	98.780	ENSCATG00000040879	MSI2	100	98.780	Cercocebus_atys
ENSCSAG00000005633	MSI2	100	94.798	ENSCLAG00000014325	MSI2	100	94.798	Chinchilla_lanigera
ENSCSAG00000005633	MSI2	90	70.000	ENSCHOG00000008660	MSI2	100	70.000	Choloepus_hoffmanni
ENSCSAG00000005633	MSI2	94	99.015	ENSCPBG00000009942	MSI2	95	91.760	Chrysemys_picta_bellii
ENSCSAG00000005633	MSI2	87	54.634	ENSCING00000018579	-	97	53.125	Ciona_intestinalis
ENSCSAG00000005633	MSI2	65	66.667	ENSCSAVG00000010397	-	72	65.517	Ciona_savignyi
ENSCSAG00000005633	MSI2	94	99.556	ENSCANG00000036414	MSI2	100	94.444	Colobus_angolensis_palliatus
ENSCSAG00000005633	MSI2	100	99.392	ENSCGRG00001013330	Msi2	100	99.392	Cricetulus_griseus_chok1gshd
ENSCSAG00000005633	MSI2	94	94.172	ENSCGRG00000003141	Msi2	100	94.172	Cricetulus_griseus_crigri
ENSCSAG00000005633	MSI2	78	75.258	ENSCSEG00000013557	msi2a	83	73.711	Cynoglossus_semilaevis
ENSCSAG00000005633	MSI2	100	79.878	ENSCSEG00000003266	-	100	79.878	Cynoglossus_semilaevis
ENSCSAG00000005633	MSI2	61	73.913	ENSCSEG00000013549	msi2a	100	73.913	Cynoglossus_semilaevis
ENSCSAG00000005633	MSI2	100	86.280	ENSCVAG00000017075	msi2a	100	87.320	Cyprinodon_variegatus
ENSCSAG00000005633	MSI2	100	77.062	ENSDARG00000033901	msi2a	100	77.320	Danio_rerio
ENSCSAG00000005633	MSI2	92	94.079	ENSDARG00000032614	msi2b	100	98.020	Danio_rerio
ENSCSAG00000005633	MSI2	94	100.000	ENSDNOG00000014501	MSI2	100	100.000	Dasypus_novemcinctus
ENSCSAG00000005633	MSI2	51	100.000	ENSDORG00000028440	-	100	100.000	Dipodomys_ordii
ENSCSAG00000005633	MSI2	78	88.832	ENSDORG00000005394	Msi2	84	87.817	Dipodomys_ordii
ENSCSAG00000005633	MSI2	97	57.143	FBgn0260943	Rbp6	88	68.750	Drosophila_melanogaster
ENSCSAG00000005633	MSI2	67	76.316	ENSETEG00000012450	-	64	76.316	Echinops_telfairi
ENSCSAG00000005633	MSI2	88	66.238	ENSEBUG00000006732	msi2a	87	64.630	Eptatretus_burgeri
ENSCSAG00000005633	MSI2	94	95.793	ENSEASG00005002965	MSI2	97	87.429	Equus_asinus_asinus
ENSCSAG00000005633	MSI2	94	98.696	ENSECAG00000011435	MSI2	100	92.373	Equus_caballus
ENSCSAG00000005633	MSI2	82	85.375	ENSEEUG00000007810	MSI2	100	85.375	Erinaceus_europaeus
ENSCSAG00000005633	MSI2	100	83.714	ENSELUG00000001361	msi2b	100	83.714	Esox_lucius
ENSCSAG00000005633	MSI2	100	89.329	ENSELUG00000011747	msi2a	100	89.329	Esox_lucius
ENSCSAG00000005633	MSI2	57	80.128	ENSFCAG00000033787	-	82	80.128	Felis_catus
ENSCSAG00000005633	MSI2	100	100.000	ENSFCAG00000041686	MSI2	100	100.000	Felis_catus
ENSCSAG00000005633	MSI2	94	94.462	ENSFDAG00000016118	MSI2	100	94.462	Fukomys_damarensis
ENSCSAG00000005633	MSI2	97	93.227	ENSFHEG00000000084	msi2a	96	93.421	Fundulus_heteroclitus
ENSCSAG00000005633	MSI2	55	93.269	ENSGMOG00000007596	-	100	93.269	Gadus_morhua
ENSCSAG00000005633	MSI2	100	91.329	ENSGALG00000005567	MSI2	100	91.329	Gallus_gallus
ENSCSAG00000005633	MSI2	96	80.251	ENSGAFG00000006974	msi2a	90	94.040	Gambusia_affinis
ENSCSAG00000005633	MSI2	100	92.958	ENSGAGG00000016542	MSI2	100	90.132	Gopherus_agassizii
ENSCSAG00000005633	MSI2	94	99.556	ENSGGOG00000013182	MSI2	100	94.444	Gorilla_gorilla
ENSCSAG00000005633	MSI2	97	92.829	ENSHBUG00000020800	msi2a	100	87.805	Haplochromis_burtoni
ENSCSAG00000005633	MSI2	100	85.838	ENSHGLG00000012444	MSI2	100	85.838	Heterocephalus_glaber_female
ENSCSAG00000005633	MSI2	75	91.304	ENSHGLG00100003744	MSI2	100	91.304	Heterocephalus_glaber_male
ENSCSAG00000005633	MSI2	51	100.000	ENSHGLG00100004028	-	87	100.000	Heterocephalus_glaber_male
ENSCSAG00000005633	MSI2	97	92.829	ENSHCOG00000000266	msi2a	97	84.911	Hippocampus_comes
ENSCSAG00000005633	MSI2	95	81.439	ENSHCOG00000017241	-	71	81.967	Hippocampus_comes
ENSCSAG00000005633	MSI2	95	93.852	ENSIPUG00000021097	msi2a	100	87.195	Ictalurus_punctatus
ENSCSAG00000005633	MSI2	96	94.603	ENSIPUG00000003732	msi2b	92	94.603	Ictalurus_punctatus
ENSCSAG00000005633	MSI2	94	95.390	ENSSTOG00000007884	MSI2	99	95.390	Ictidomys_tridecemlineatus
ENSCSAG00000005633	MSI2	75	85.930	ENSJJAG00000006292	-	100	85.427	Jaculus_jaculus
ENSCSAG00000005633	MSI2	51	100.000	ENSJJAG00000009467	-	100	100.000	Jaculus_jaculus
ENSCSAG00000005633	MSI2	96	91.429	ENSKMAG00000009494	msi2a	96	91.720	Kryptolebias_marmoratus
ENSCSAG00000005633	MSI2	94	64.516	ENSLBEG00000026223	-	100	64.516	Labrus_bergylta
ENSCSAG00000005633	MSI2	97	93.227	ENSLBEG00000007061	msi2a	100	88.110	Labrus_bergylta
ENSCSAG00000005633	MSI2	51	95.294	ENSLACG00000016798	MSI2	98	93.407	Latimeria_chalumnae
ENSCSAG00000005633	MSI2	100	79.587	ENSLOCG00000004675	msi2b	100	84.553	Lepisosteus_oculatus
ENSCSAG00000005633	MSI2	94	99.556	ENSMFAG00000003775	MSI2	100	94.444	Macaca_fascicularis
ENSCSAG00000005633	MSI2	94	99.556	ENSMMUG00000002069	MSI2	100	94.444	Macaca_mulatta
ENSCSAG00000005633	MSI2	100	100.000	ENSMNEG00000045275	MSI2	100	100.000	Macaca_nemestrina
ENSCSAG00000005633	MSI2	94	99.556	ENSMLEG00000033888	MSI2	100	94.444	Mandrillus_leucophaeus
ENSCSAG00000005633	MSI2	97	92.829	ENSMAMG00000002488	-	99	92.715	Mastacembelus_armatus
ENSCSAG00000005633	MSI2	97	93.227	ENSMAMG00000010503	msi2a	100	86.585	Mastacembelus_armatus
ENSCSAG00000005633	MSI2	100	92.378	ENSMZEG00005007676	msi2a	100	92.378	Maylandia_zebra
ENSCSAG00000005633	MSI2	100	94.236	ENSMAUG00000003862	Msi2	100	94.236	Mesocricetus_auratus
ENSCSAG00000005633	MSI2	100	78.679	ENSMICG00000032913	-	100	79.580	Microcebus_murinus
ENSCSAG00000005633	MSI2	100	100.000	ENSMICG00000013598	-	100	100.000	Microcebus_murinus
ENSCSAG00000005633	MSI2	100	94.509	ENSMOCG00000005820	Msi2	100	94.509	Microtus_ochrogaster
ENSCSAG00000005633	MSI2	90	84.694	ENSMMOG00000008348	msi2a	91	84.858	Mola_mola
ENSCSAG00000005633	MSI2	75	89.855	ENSMODG00000014790	MSI2	100	89.855	Monodelphis_domestica
ENSCSAG00000005633	MSI2	100	86.585	ENSMALG00000000071	msi2a	100	93.464	Monopterus_albus
ENSCSAG00000005633	MSI2	100	99.695	MGP_CAROLIEiJ_G0016948	Msi2	100	100.000	Mus_caroli
ENSCSAG00000005633	MSI2	100	99.695	ENSMUSG00000069769	Msi2	100	100.000	Mus_musculus
ENSCSAG00000005633	MSI2	100	99.695	MGP_PahariEiJ_G0018079	Msi2	100	100.000	Mus_pahari
ENSCSAG00000005633	MSI2	100	99.695	MGP_SPRETEiJ_G0017795	Msi2	100	100.000	Mus_spretus
ENSCSAG00000005633	MSI2	94	100.000	ENSMPUG00000015377	MSI2	97	100.000	Mustela_putorius_furo
ENSCSAG00000005633	MSI2	94	99.674	ENSMLUG00000007865	MSI2	97	99.674	Myotis_lucifugus
ENSCSAG00000005633	MSI2	100	94.509	ENSNGAG00000017807	Msi2	100	94.509	Nannospalax_galili
ENSCSAG00000005633	MSI2	100	87.805	ENSNBRG00000014596	msi2a	100	87.805	Neolamprologus_brichardi
ENSCSAG00000005633	MSI2	94	99.556	ENSNLEG00000008059	MSI2	100	94.212	Nomascus_leucogenys
ENSCSAG00000005633	MSI2	67	88.816	ENSOPRG00000000872	-	64	88.816	Ochotona_princeps
ENSCSAG00000005633	MSI2	100	94.798	ENSODEG00000011974	MSI2	100	94.798	Octodon_degus
ENSCSAG00000005633	MSI2	58	94.040	ENSONIG00000001972	msi2a	84	94.040	Oreochromis_niloticus
ENSCSAG00000005633	MSI2	92	95.745	ENSOANG00000005667	MSI2	72	95.745	Ornithorhynchus_anatinus
ENSCSAG00000005633	MSI2	94	100.000	ENSOCUG00000010440	MSI2	97	100.000	Oryctolagus_cuniculus
ENSCSAG00000005633	MSI2	96	92.381	ENSORLG00000009671	msi2a	95	92.675	Oryzias_latipes
ENSCSAG00000005633	MSI2	97	93.227	ENSORLG00020021556	msi2a	100	86.585	Oryzias_latipes_hni
ENSCSAG00000005633	MSI2	96	92.381	ENSORLG00015004592	msi2a	95	92.675	Oryzias_latipes_hsok
ENSCSAG00000005633	MSI2	100	86.585	ENSOMEG00000000146	msi2a	98	91.694	Oryzias_melastigma
ENSCSAG00000005633	MSI2	94	95.440	ENSOGAG00000005621	MSI2	99	95.440	Otolemur_garnettii
ENSCSAG00000005633	MSI2	94	94.444	ENSPPAG00000037697	MSI2	100	94.444	Pan_paniscus
ENSCSAG00000005633	MSI2	94	100.000	ENSPPRG00000001848	MSI2	94	100.000	Panthera_pardus
ENSCSAG00000005633	MSI2	74	78.512	ENSPTIG00000021873	-	92	78.512	Panthera_tigris_altaica
ENSCSAG00000005633	MSI2	94	94.212	ENSPTIG00000021678	MSI2	96	94.212	Panthera_tigris_altaica
ENSCSAG00000005633	MSI2	94	99.556	ENSPTRG00000009437	MSI2	100	94.444	Pan_troglodytes
ENSCSAG00000005633	MSI2	100	100.000	ENSPANG00000022319	MSI2	100	100.000	Papio_anubis
ENSCSAG00000005633	MSI2	96	90.159	ENSPKIG00000007038	-	96	86.061	Paramormyrops_kingsleyae
ENSCSAG00000005633	MSI2	100	98.106	ENSPSIG00000008618	MSI2	83	98.106	Pelodiscus_sinensis
ENSCSAG00000005633	MSI2	100	87.500	ENSPMGG00000005888	msi2a	100	87.500	Periophthalmus_magnuspinnatus
ENSCSAG00000005633	MSI2	51	100.000	ENSPEMG00000021793	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSCSAG00000005633	MSI2	100	90.395	ENSPCIG00000006063	MSI2	100	90.395	Phascolarctos_cinereus
ENSCSAG00000005633	MSI2	57	91.429	ENSPFOG00000019337	MSI2	92	91.429	Poecilia_formosa
ENSCSAG00000005633	MSI2	58	90.210	ENSPLAG00000000436	msi2a	76	90.845	Poecilia_latipinna
ENSCSAG00000005633	MSI2	58	79.720	ENSPMEG00000013247	msi2a	80	79.720	Poecilia_mexicana
ENSCSAG00000005633	MSI2	97	93.227	ENSPREG00000000881	msi2a	99	85.671	Poecilia_reticulata
ENSCSAG00000005633	MSI2	94	96.639	ENSPPYG00000008244	-	100	96.639	Pongo_abelii
ENSCSAG00000005633	MSI2	73	70.588	ENSPCAG00000010552	MSI2	100	70.588	Procavia_capensis
ENSCSAG00000005633	MSI2	52	99.237	ENSPCOG00000019195	-	93	99.237	Propithecus_coquereli
ENSCSAG00000005633	MSI2	94	90.785	ENSPVAG00000017053	MSI2	100	90.785	Pteropus_vampyrus
ENSCSAG00000005633	MSI2	100	92.378	ENSPNYG00000018393	msi2a	100	92.378	Pundamilia_nyererei
ENSCSAG00000005633	MSI2	100	93.617	ENSPNAG00000014957	msi2a	100	92.097	Pygocentrus_nattereri
ENSCSAG00000005633	MSI2	100	90.274	ENSPNAG00000000844	msi2b	100	88.754	Pygocentrus_nattereri
ENSCSAG00000005633	MSI2	94	100.000	ENSRNOG00000025338	Msi2	100	100.000	Rattus_norvegicus
ENSCSAG00000005633	MSI2	52	99.130	ENSRROG00000034421	-	92	99.130	Rhinopithecus_roxellana
ENSCSAG00000005633	MSI2	94	100.000	ENSSBOG00000026425	MSI2	100	94.444	Saimiri_boliviensis_boliviensis
ENSCSAG00000005633	MSI2	94	93.210	ENSSHAG00000008672	MSI2	100	93.210	Sarcophilus_harrisii
ENSCSAG00000005633	MSI2	96	82.449	ENSSFOG00015012168	msi2b	76	82.449	Scleropages_formosus
ENSCSAG00000005633	MSI2	94	89.577	ENSSFOG00015021687	-	97	87.948	Scleropages_formosus
ENSCSAG00000005633	MSI2	97	93.227	ENSSMAG00000018484	msi2a	100	88.110	Scophthalmus_maximus
ENSCSAG00000005633	MSI2	97	93.227	ENSSDUG00000014507	msi2a	100	88.110	Seriola_dumerili
ENSCSAG00000005633	MSI2	100	83.728	ENSSDUG00000021968	-	99	92.053	Seriola_dumerili
ENSCSAG00000005633	MSI2	97	93.227	ENSSLDG00000017172	msi2a	100	88.110	Seriola_lalandi_dorsalis
ENSCSAG00000005633	MSI2	58	94.304	ENSSPUG00000000913	-	94	94.304	Sphenodon_punctatus
ENSCSAG00000005633	MSI2	97	93.227	ENSSPAG00000017793	msi2a	96	86.032	Stegastes_partitus
ENSCSAG00000005633	MSI2	100	100.000	ENSSSCG00000038505	MSI2	100	100.000	Sus_scrofa
ENSCSAG00000005633	MSI2	75	90.338	ENSTGUG00000008452	MSI2	100	90.338	Taeniopygia_guttata
ENSCSAG00000005633	MSI2	100	86.866	ENSTRUG00000021248	msi2a	100	86.866	Takifugu_rubripes
ENSCSAG00000005633	MSI2	74	82.645	ENSTBEG00000001241	MSI2	73	82.645	Tupaia_belangeri
ENSCSAG00000005633	MSI2	94	90.756	ENSTTRG00000002189	MSI2	100	90.756	Tursiops_truncatus
ENSCSAG00000005633	MSI2	94	100.000	ENSUAMG00000000700	MSI2	97	100.000	Ursus_americanus
ENSCSAG00000005633	MSI2	90	92.075	ENSUMAG00000000505	MSI2	95	92.075	Ursus_maritimus
ENSCSAG00000005633	MSI2	55	84.615	ENSVPAG00000006837	-	62	84.615	Vicugna_pacos
ENSCSAG00000005633	MSI2	100	98.671	ENSVVUG00000011783	MSI2	100	98.671	Vulpes_vulpes
ENSCSAG00000005633	MSI2	96	87.500	ENSXCOG00000006113	msi2a	89	87.500	Xiphophorus_couchianus
ENSCSAG00000005633	MSI2	97	93.227	ENSXMAG00000000608	msi2a	100	87.320	Xiphophorus_maculatus