EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000005642 (Gene tree)
Gene ID: 103242860
Gene Symbol: -
Alias: ASF|MGC5228|SF2|SF2p33|SFRS1|SRp30a
Full Name: -
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 2110 bases
Position: chr16:35392873-35394982
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000001953	RRM_1	PF00076.22	2.2e-33	1	2
ENSCSAP00000001953	RRM_1	PF00076.22	2.2e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000003679	-	762	-	ENSCSAP00000001953	253 (aa)	-	A0A0D9R014

Gene Model

Click here to download ENSCSAG00000005642's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03040	Spliceosome	KEGG
csab04657	IL-17 signaling pathway	KEGG
csab05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000005642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000005642	-	63	45.783	ENSCSAG00000013041	SRSF5	59	44.311
ENSCSAG00000005642	-	76	40.670	ENSCSAG00000014022	SRSF6	58	39.713
ENSCSAG00000005642	-	76	69.271	ENSCSAG00000002257	SRSF9	82	69.271

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000005642	-	100	99.209	ENSG00000136450	SRSF1	100	99.209	Homo_sapiens
ENSCSAG00000005642	-	78	90.148	ENSAPOG00000008542	-	100	85.433	Acanthochromis_polyacanthus
ENSCSAG00000005642	-	76	90.674	ENSAPOG00000002748	-	98	83.539	Acanthochromis_polyacanthus
ENSCSAG00000005642	-	97	96.341	ENSAMEG00000002635	SRSF1	99	96.341	Ailuropoda_melanoleuca
ENSCSAG00000005642	-	88	85.202	ENSACIG00000008091	srsf1a	98	78.099	Amphilophus_citrinellus
ENSCSAG00000005642	-	88	85.650	ENSAOCG00000010671	-	98	84.362	Amphiprion_ocellaris
ENSCSAG00000005642	-	78	90.148	ENSAOCG00000000337	-	100	85.714	Amphiprion_ocellaris
ENSCSAG00000005642	-	88	85.650	ENSAPEG00000009915	-	98	84.362	Amphiprion_percula
ENSCSAG00000005642	-	78	90.148	ENSAPEG00000023352	-	99	85.771	Amphiprion_percula
ENSCSAG00000005642	-	76	91.192	ENSATEG00000022403	-	99	83.740	Anabas_testudineus
ENSCSAG00000005642	-	80	86.207	ENSATEG00000021567	-	100	84.146	Anabas_testudineus
ENSCSAG00000005642	-	97	97.561	ENSACAG00000005542	-	99	97.561	Anolis_carolinensis
ENSCSAG00000005642	-	79	73.000	ENSANAG00000025417	-	99	75.610	Aotus_nancymaae
ENSCSAG00000005642	-	100	99.209	ENSANAG00000020583	-	100	99.209	Aotus_nancymaae
ENSCSAG00000005642	-	53	77.419	ENSAMXG00000024373	-	94	77.295	Astyanax_mexicanus
ENSCSAG00000005642	-	92	90.795	ENSAMXG00000035996	srsf1a	98	92.339	Astyanax_mexicanus
ENSCSAG00000005642	-	100	99.209	ENSBTAG00000014766	SRSF1	100	99.209	Bos_taurus
ENSCSAG00000005642	-	100	99.209	ENSCJAG00000041713	-	100	99.209	Callithrix_jacchus
ENSCSAG00000005642	-	77	90.816	ENSCJAG00000008111	-	88	90.355	Callithrix_jacchus
ENSCSAG00000005642	-	100	99.209	ENSCAFG00000017430	SRSF1	100	99.209	Canis_familiaris
ENSCSAG00000005642	-	100	99.209	ENSCAFG00020025632	-	100	99.209	Canis_lupus_dingo
ENSCSAG00000005642	-	97	99.187	ENSCHIG00000010787	SRSF1	99	99.187	Capra_hircus
ENSCSAG00000005642	-	100	99.209	ENSTSYG00000013899	-	100	99.209	Carlito_syrichta
ENSCSAG00000005642	-	100	99.209	ENSCPOG00000032681	-	100	99.209	Cavia_porcellus
ENSCSAG00000005642	-	100	99.209	ENSCCAG00000029484	-	100	99.209	Cebus_capucinus
ENSCSAG00000005642	-	100	99.209	ENSCATG00000042294	-	100	99.209	Cercocebus_atys
ENSCSAG00000005642	-	100	99.209	ENSCLAG00000014707	-	100	99.209	Chinchilla_lanigera
ENSCSAG00000005642	-	97	99.187	ENSCHOG00000001899	SRSF1	99	99.187	Choloepus_hoffmanni
ENSCSAG00000005642	-	100	98.024	ENSCPBG00000009851	-	100	98.024	Chrysemys_picta_bellii
ENSCSAG00000005642	-	100	99.209	ENSCANG00000029726	-	100	99.209	Colobus_angolensis_palliatus
ENSCSAG00000005642	-	100	99.209	ENSCGRG00001000670	Srsf1	100	99.209	Cricetulus_griseus_chok1gshd
ENSCSAG00000005642	-	100	99.209	ENSCGRG00000005590	Srsf1	100	99.209	Cricetulus_griseus_crigri
ENSCSAG00000005642	-	76	90.306	ENSCSEG00000014272	-	98	83.740	Cynoglossus_semilaevis
ENSCSAG00000005642	-	77	83.019	ENSCSEG00000009973	-	100	79.545	Cynoglossus_semilaevis
ENSCSAG00000005642	-	76	88.718	ENSCVAG00000005458	-	98	85.366	Cyprinodon_variegatus
ENSCSAG00000005642	-	76	91.192	ENSCVAG00000018617	-	98	84.362	Cyprinodon_variegatus
ENSCSAG00000005642	-	77	88.725	ENSDARG00000057691	srsf1a	98	90.909	Danio_rerio
ENSCSAG00000005642	-	96	95.885	ENSDARG00000017843	srsf1b	99	93.061	Danio_rerio
ENSCSAG00000005642	-	100	99.209	ENSDNOG00000011737	-	100	99.209	Dasypus_novemcinctus
ENSCSAG00000005642	-	100	99.209	ENSDORG00000015082	Srsf1	100	99.209	Dipodomys_ordii
ENSCSAG00000005642	-	73	97.826	ENSETEG00000005349	-	63	97.826	Echinops_telfairi
ENSCSAG00000005642	-	100	99.209	ENSEASG00005002922	-	100	99.209	Equus_asinus_asinus
ENSCSAG00000005642	-	97	99.187	ENSECAG00000016654	SRSF1	99	99.187	Equus_caballus
ENSCSAG00000005642	-	73	98.913	ENSEEUG00000009255	-	63	98.913	Erinaceus_europaeus
ENSCSAG00000005642	-	77	92.268	ENSELUG00000021646	srsf1a	99	78.715	Esox_lucius
ENSCSAG00000005642	-	100	99.209	ENSFCAG00000002250	-	100	99.209	Felis_catus
ENSCSAG00000005642	-	100	81.818	ENSFALG00000005062	-	100	81.818	Ficedula_albicollis
ENSCSAG00000005642	-	100	99.209	ENSFDAG00000010646	-	100	99.209	Fukomys_damarensis
ENSCSAG00000005642	-	88	85.650	ENSFHEG00000003174	srsf1a	98	84.362	Fundulus_heteroclitus
ENSCSAG00000005642	-	90	85.526	ENSGMOG00000014787	-	99	81.818	Gadus_morhua
ENSCSAG00000005642	-	97	97.967	ENSGALG00000005525	SRSF1	99	97.967	Gallus_gallus
ENSCSAG00000005642	-	78	85.787	ENSGACG00000020621	srsf1b	100	73.577	Gasterosteus_aculeatus
ENSCSAG00000005642	-	100	98.024	ENSGAGG00000022965	-	100	98.024	Gopherus_agassizii
ENSCSAG00000005642	-	100	99.209	ENSGGOG00000004386	SRSF1	100	99.209	Gorilla_gorilla
ENSCSAG00000005642	-	88	85.202	ENSHBUG00000016788	srsf1a	98	83.951	Haplochromis_burtoni
ENSCSAG00000005642	-	85	98.140	ENSHGLG00000000669	-	100	98.140	Heterocephalus_glaber_female
ENSCSAG00000005642	-	85	98.140	ENSHGLG00000000600	-	100	98.140	Heterocephalus_glaber_female
ENSCSAG00000005642	-	100	99.209	ENSHGLG00100016906	-	100	99.209	Heterocephalus_glaber_male
ENSCSAG00000005642	-	76	86.294	ENSHCOG00000018918	srsf1a	98	80.800	Hippocampus_comes
ENSCSAG00000005642	-	97	95.122	ENSIPUG00000008750	srsf1b	99	95.122	Ictalurus_punctatus
ENSCSAG00000005642	-	92	90.377	ENSIPUG00000017039	srsf1a	98	92.339	Ictalurus_punctatus
ENSCSAG00000005642	-	100	99.209	ENSSTOG00000000243	-	100	99.209	Ictidomys_tridecemlineatus
ENSCSAG00000005642	-	100	99.209	ENSJJAG00000000102	-	100	99.209	Jaculus_jaculus
ENSCSAG00000005642	-	50	90.551	ENSJJAG00000014464	-	95	86.614	Jaculus_jaculus
ENSCSAG00000005642	-	76	91.192	ENSKMAG00000019232	srsf1a	98	83.128	Kryptolebias_marmoratus
ENSCSAG00000005642	-	78	83.500	ENSLBEG00000015294	-	98	82.329	Labrus_bergylta
ENSCSAG00000005642	-	88	84.753	ENSLBEG00000020864	-	99	83.197	Labrus_bergylta
ENSCSAG00000005642	-	77	93.814	ENSLACG00000014160	srsf1a	92	93.061	Latimeria_chalumnae
ENSCSAG00000005642	-	97	96.341	ENSLOCG00000005994	srsf1a	99	96.341	Lepisosteus_oculatus
ENSCSAG00000005642	-	97	99.187	ENSLAFG00000025743	SRSF1	99	99.187	Loxodonta_africana
ENSCSAG00000005642	-	100	99.209	ENSMFAG00000040003	-	100	99.209	Macaca_fascicularis
ENSCSAG00000005642	-	100	99.209	ENSMMUG00000004725	SRSF1	100	99.209	Macaca_mulatta
ENSCSAG00000005642	-	100	96.443	ENSMMUG00000003260	-	100	96.443	Macaca_mulatta
ENSCSAG00000005642	-	100	99.209	ENSMNEG00000027680	-	100	99.209	Macaca_nemestrina
ENSCSAG00000005642	-	100	96.047	ENSMNEG00000015983	-	100	96.047	Macaca_nemestrina
ENSCSAG00000005642	-	100	92.885	ENSMLEG00000015243	-	100	92.490	Mandrillus_leucophaeus
ENSCSAG00000005642	-	97	99.187	ENSMLEG00000040509	SRSF1	99	99.187	Mandrillus_leucophaeus
ENSCSAG00000005642	-	76	91.192	ENSMAMG00000018454	-	98	84.362	Mastacembelus_armatus
ENSCSAG00000005642	-	78	93.909	ENSMAMG00000019691	-	100	87.398	Mastacembelus_armatus
ENSCSAG00000005642	-	78	89.340	ENSMAMG00000019687	-	100	84.274	Mastacembelus_armatus
ENSCSAG00000005642	-	100	99.209	ENSMAUG00000021845	Srsf1	100	99.209	Mesocricetus_auratus
ENSCSAG00000005642	-	100	99.209	ENSMICG00000013639	-	100	99.209	Microcebus_murinus
ENSCSAG00000005642	-	100	99.209	ENSMOCG00000001996	Srsf1	100	99.209	Microtus_ochrogaster
ENSCSAG00000005642	-	88	84.305	ENSMMOG00000014354	srsf1a	98	77.273	Mola_mola
ENSCSAG00000005642	-	73	97.838	ENSMODG00000014781	-	63	97.838	Monodelphis_domestica
ENSCSAG00000005642	-	80	77.340	ENSMALG00000007763	-	79	78.680	Monopterus_albus
ENSCSAG00000005642	-	76	90.674	ENSMALG00000017129	-	75	87.565	Monopterus_albus
ENSCSAG00000005642	-	100	99.209	MGP_CAROLIEiJ_G0016943	Srsf1	100	99.209	Mus_caroli
ENSCSAG00000005642	-	100	99.209	ENSMUSG00000018379	Srsf1	100	99.209	Mus_musculus
ENSCSAG00000005642	-	100	99.209	MGP_PahariEiJ_G0018074	Srsf1	100	99.209	Mus_pahari
ENSCSAG00000005642	-	100	99.209	MGP_SPRETEiJ_G0017790	Srsf1	100	99.209	Mus_spretus
ENSCSAG00000005642	-	97	99.187	ENSMPUG00000015369	SRSF1	99	99.187	Mustela_putorius_furo
ENSCSAG00000005642	-	80	89.655	ENSMLUG00000023995	-	100	89.516	Myotis_lucifugus
ENSCSAG00000005642	-	97	99.187	ENSMLUG00000011040	SRSF1	99	99.187	Myotis_lucifugus
ENSCSAG00000005642	-	97	99.187	ENSNGAG00000011395	Srsf1	99	99.187	Nannospalax_galili
ENSCSAG00000005642	-	97	78.862	ENSNBRG00000008041	srsf1b	80	81.726	Neolamprologus_brichardi
ENSCSAG00000005642	-	100	99.209	ENSNLEG00000008088	-	100	99.209	Nomascus_leucogenys
ENSCSAG00000005642	-	50	96.850	ENSMEUG00000002783	-	100	96.850	Notamacropus_eugenii
ENSCSAG00000005642	-	72	98.361	ENSOPRG00000001234	-	100	98.361	Ochotona_princeps
ENSCSAG00000005642	-	100	98.419	ENSODEG00000011481	-	100	98.419	Octodon_degus
ENSCSAG00000005642	-	94	89.873	ENSONIG00000004860	-	81	89.848	Oreochromis_niloticus
ENSCSAG00000005642	-	76	90.674	ENSONIG00000013160	-	98	83.951	Oreochromis_niloticus
ENSCSAG00000005642	-	96	70.161	ENSOCUG00000010894	-	77	71.282	Oryctolagus_cuniculus
ENSCSAG00000005642	-	76	91.192	ENSORLG00000004580	srsf1a	98	84.362	Oryzias_latipes
ENSCSAG00000005642	-	88	85.650	ENSORLG00020009456	srsf1a	98	84.362	Oryzias_latipes_hni
ENSCSAG00000005642	-	88	85.650	ENSORLG00015014384	srsf1a	98	83.951	Oryzias_latipes_hsok
ENSCSAG00000005642	-	70	89.205	ENSOMEG00000004106	srsf1a	92	81.858	Oryzias_melastigma
ENSCSAG00000005642	-	97	99.187	ENSOGAG00000025950	-	99	99.187	Otolemur_garnettii
ENSCSAG00000005642	-	97	94.309	ENSOARG00000008323	SRSF1	99	94.309	Ovis_aries
ENSCSAG00000005642	-	100	99.209	ENSPPAG00000043403	-	100	99.209	Pan_paniscus
ENSCSAG00000005642	-	100	99.209	ENSPPRG00000004238	-	100	99.209	Panthera_pardus
ENSCSAG00000005642	-	100	99.209	ENSPTRG00000049077	SRSF1	100	99.209	Pan_troglodytes
ENSCSAG00000005642	-	100	76.680	ENSPANG00000030275	-	100	76.285	Papio_anubis
ENSCSAG00000005642	-	100	99.209	ENSPANG00000022305	-	100	99.209	Papio_anubis
ENSCSAG00000005642	-	94	85.232	ENSPKIG00000007204	srsf1a	99	91.393	Paramormyrops_kingsleyae
ENSCSAG00000005642	-	97	95.122	ENSPKIG00000012857	srsf1b	99	95.122	Paramormyrops_kingsleyae
ENSCSAG00000005642	-	78	89.950	ENSPSIG00000009000	-	100	91.200	Pelodiscus_sinensis
ENSCSAG00000005642	-	88	82.960	ENSPMGG00000013112	-	99	84.810	Periophthalmus_magnuspinnatus
ENSCSAG00000005642	-	94	84.100	ENSPMGG00000005467	-	99	84.615	Periophthalmus_magnuspinnatus
ENSCSAG00000005642	-	100	99.209	ENSPEMG00000021416	Srsf1	100	99.209	Peromyscus_maniculatus_bairdii
ENSCSAG00000005642	-	97	98.381	ENSPCIG00000006076	-	99	98.381	Phascolarctos_cinereus
ENSCSAG00000005642	-	78	88.889	ENSPFOG00000018325	-	86	84.898	Poecilia_formosa
ENSCSAG00000005642	-	78	88.889	ENSPLAG00000008416	srsf1b	98	84.898	Poecilia_latipinna
ENSCSAG00000005642	-	78	88.889	ENSPMEG00000002388	-	98	84.898	Poecilia_mexicana
ENSCSAG00000005642	-	76	91.192	ENSPREG00000009667	srsf1a	98	84.362	Poecilia_reticulata
ENSCSAG00000005642	-	100	99.209	ENSPPYG00000008240	SRSF1	100	99.209	Pongo_abelii
ENSCSAG00000005642	-	97	99.187	ENSPCAG00000005199	SRSF1	99	99.187	Procavia_capensis
ENSCSAG00000005642	-	100	99.209	ENSPCOG00000023654	-	100	99.209	Propithecus_coquereli
ENSCSAG00000005642	-	79	75.743	ENSPCOG00000025736	-	95	75.510	Propithecus_coquereli
ENSCSAG00000005642	-	73	100.000	ENSPVAG00000000519	-	74	100.000	Pteropus_vampyrus
ENSCSAG00000005642	-	78	91.878	ENSPNAG00000014601	srsf1b	100	87.500	Pygocentrus_nattereri
ENSCSAG00000005642	-	92	92.308	ENSPNAG00000022241	srsf1a	98	90.123	Pygocentrus_nattereri
ENSCSAG00000005642	-	97	99.187	ENSRNOG00000050323	Srsf1	99	99.187	Rattus_norvegicus
ENSCSAG00000005642	-	100	99.209	ENSRBIG00000034445	-	100	99.209	Rhinopithecus_bieti
ENSCSAG00000005642	-	100	99.209	ENSRROG00000041506	-	100	99.209	Rhinopithecus_roxellana
ENSCSAG00000005642	-	100	99.209	ENSSBOG00000025377	-	100	99.209	Saimiri_boliviensis_boliviensis
ENSCSAG00000005642	-	97	98.381	ENSSHAG00000002552	-	99	98.381	Sarcophilus_harrisii
ENSCSAG00000005642	-	97	95.510	ENSSFOG00015004800	srsf1a	98	95.510	Scleropages_formosus
ENSCSAG00000005642	-	76	89.637	ENSSMAG00000007018	-	98	82.305	Scophthalmus_maximus
ENSCSAG00000005642	-	92	86.250	ENSSMAG00000009719	-	100	85.490	Scophthalmus_maximus
ENSCSAG00000005642	-	88	84.753	ENSSDUG00000011303	-	99	83.197	Seriola_dumerili
ENSCSAG00000005642	-	97	75.904	ENSSDUG00000003929	-	99	76.707	Seriola_dumerili
ENSCSAG00000005642	-	76	90.155	ENSSLDG00000010543	-	99	83.197	Seriola_lalandi_dorsalis
ENSCSAG00000005642	-	78	82.828	ENSSLDG00000016868	-	99	81.855	Seriola_lalandi_dorsalis
ENSCSAG00000005642	-	93	75.847	ENSSLDG00000016895	-	99	75.304	Seriola_lalandi_dorsalis
ENSCSAG00000005642	-	73	98.913	ENSSARG00000010949	-	63	98.913	Sorex_araneus
ENSCSAG00000005642	-	100	98.024	ENSSPUG00000000804	-	100	98.024	Sphenodon_punctatus
ENSCSAG00000005642	-	76	91.710	ENSSPAG00000022562	-	98	84.774	Stegastes_partitus
ENSCSAG00000005642	-	78	87.081	ENSSPAG00000014152	-	99	83.784	Stegastes_partitus
ENSCSAG00000005642	-	100	99.209	ENSSSCG00000017626	-	100	99.209	Sus_scrofa
ENSCSAG00000005642	-	73	96.739	ENSTGUG00000008416	-	100	96.739	Taeniopygia_guttata
ENSCSAG00000005642	-	76	90.155	ENSTRUG00000003691	srsf1a	98	83.539	Takifugu_rubripes
ENSCSAG00000005642	-	76	90.155	ENSTNIG00000016223	srsf1a	98	83.539	Tetraodon_nigroviridis
ENSCSAG00000005642	-	73	97.283	ENSTBEG00000015378	-	63	97.283	Tupaia_belangeri
ENSCSAG00000005642	-	72	98.361	ENSTTRG00000007310	SRSF1	100	98.361	Tursiops_truncatus
ENSCSAG00000005642	-	97	99.187	ENSUAMG00000009858	SRSF1	99	99.187	Ursus_americanus
ENSCSAG00000005642	-	100	99.209	ENSUMAG00000000455	-	100	99.209	Ursus_maritimus
ENSCSAG00000005642	-	97	98.780	ENSVPAG00000010094	SRSF1	99	98.780	Vicugna_pacos
ENSCSAG00000005642	-	100	99.209	ENSVVUG00000011882	-	100	99.209	Vulpes_vulpes
ENSCSAG00000005642	-	97	95.122	ENSXETG00000008954	srsf1	99	90.566	Xenopus_tropicalis
ENSCSAG00000005642	-	76	91.192	ENSXMAG00000011766	srsf1a	98	84.362	Xiphophorus_maculatus