EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000005784 (Gene tree)
Gene ID: 103223389
Gene Symbol: XRCC6
Alias: D22S671|D22S731|G22P1|KU70|ML8
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 45838 bases
Position: chr19:24160483-24206320
Accession: 103223389
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000002092	SAP	PF02037.27	2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000003815	XRCC6-201	4296	-	ENSCSAP00000002092	609 (aa)	XP_007974110	A0A0D9R0F3

Gene Model

Click here to download ENSCSAG00000005784's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000005784's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000005784	XRCC6	100	99.179	ENSG00000196419	XRCC6	100	99.179	Homo_sapiens
ENSCSAG00000005784	XRCC6	99	56.414	ENSAPOG00000012704	xrcc6	99	56.414	Acanthochromis_polyacanthus
ENSCSAG00000005784	XRCC6	99	56.250	ENSACIG00000021277	xrcc6	99	56.250	Amphilophus_citrinellus
ENSCSAG00000005784	XRCC6	99	55.337	ENSAOCG00000021344	xrcc6	99	55.410	Amphiprion_ocellaris
ENSCSAG00000005784	XRCC6	99	55.665	ENSAPEG00000020712	xrcc6	99	55.738	Amphiprion_percula
ENSCSAG00000005784	XRCC6	99	56.250	ENSATEG00000007119	xrcc6	99	56.086	Anabas_testudineus
ENSCSAG00000005784	XRCC6	90	71.143	ENSAPLG00000004469	XRCC6	99	71.143	Anas_platyrhynchos
ENSCSAG00000005784	XRCC6	100	87.356	ENSANAG00000020017	-	91	97.030	Aotus_nancymaae
ENSCSAG00000005784	XRCC6	100	98.851	ENSANAG00000018684	XRCC6	100	98.851	Aotus_nancymaae
ENSCSAG00000005784	XRCC6	100	84.039	ENSANAG00000023445	-	100	84.039	Aotus_nancymaae
ENSCSAG00000005784	XRCC6	100	86.043	ENSANAG00000035230	-	100	86.043	Aotus_nancymaae
ENSCSAG00000005784	XRCC6	99	56.414	ENSACLG00000018608	xrcc6	99	56.250	Astatotilapia_calliptera
ENSCSAG00000005784	XRCC6	99	57.843	ENSAMXG00000007545	xrcc6	99	57.680	Astyanax_mexicanus
ENSCSAG00000005784	XRCC6	100	98.686	ENSCJAG00000045512	XRCC6	100	98.686	Callithrix_jacchus
ENSCSAG00000005784	XRCC6	99	86.842	ENSTSYG00000011348	XRCC6	99	86.842	Carlito_syrichta
ENSCSAG00000005784	XRCC6	90	98.438	ENSCCAG00000030468	-	100	98.438	Cebus_capucinus
ENSCSAG00000005784	XRCC6	100	79.475	ENSCCAG00000037663	-	97	78.818	Cebus_capucinus
ENSCSAG00000005784	XRCC6	100	79.475	ENSCCAG00000035711	-	100	79.475	Cebus_capucinus
ENSCSAG00000005784	XRCC6	100	92.939	ENSCCAG00000030041	-	95	92.939	Cebus_capucinus
ENSCSAG00000005784	XRCC6	100	100.000	ENSCATG00000042366	XRCC6	100	100.000	Cercocebus_atys
ENSCSAG00000005784	XRCC6	99	85.502	ENSCLAG00000016669	XRCC6	99	85.502	Chinchilla_lanigera
ENSCSAG00000005784	XRCC6	99	74.056	ENSCPBG00000020535	XRCC6	99	74.220	Chrysemys_picta_bellii
ENSCSAG00000005784	XRCC6	95	35.849	ENSCING00000000633	-	95	35.849	Ciona_intestinalis
ENSCSAG00000005784	XRCC6	100	100.000	ENSCANG00000031032	XRCC6	100	100.000	Colobus_angolensis_palliatus
ENSCSAG00000005784	XRCC6	99	76.809	ENSCGRG00001019029	Xrcc6	99	76.809	Cricetulus_griseus_chok1gshd
ENSCSAG00000005784	XRCC6	99	84.539	ENSCGRG00000001528	Xrcc6	99	84.539	Cricetulus_griseus_crigri
ENSCSAG00000005784	XRCC6	99	56.536	ENSCSEG00000020434	xrcc6	99	56.373	Cynoglossus_semilaevis
ENSCSAG00000005784	XRCC6	99	56.486	ENSCVAG00000002189	xrcc6	99	56.486	Cyprinodon_variegatus
ENSCSAG00000005784	XRCC6	99	58.361	ENSDARG00000071551	xrcc6	99	58.689	Danio_rerio
ENSCSAG00000005784	XRCC6	78	76.923	ENSETEG00000015333	-	78	76.923	Echinops_telfairi
ENSCSAG00000005784	XRCC6	99	85.691	ENSEASG00005001514	XRCC6	99	86.020	Equus_asinus_asinus
ENSCSAG00000005784	XRCC6	99	85.197	ENSECAG00000017563	XRCC6	99	86.275	Equus_caballus
ENSCSAG00000005784	XRCC6	100	54.723	ENSELUG00000020301	xrcc6	100	54.723	Esox_lucius
ENSCSAG00000005784	XRCC6	100	70.425	ENSFALG00000011908	XRCC6	97	70.098	Ficedula_albicollis
ENSCSAG00000005784	XRCC6	99	57.353	ENSFHEG00000016833	xrcc6	99	57.190	Fundulus_heteroclitus
ENSCSAG00000005784	XRCC6	99	48.768	ENSGMOG00000013524	xrcc6	99	48.768	Gadus_morhua
ENSCSAG00000005784	XRCC6	99	70.049	ENSGALG00000011932	XRCC6	99	69.885	Gallus_gallus
ENSCSAG00000005784	XRCC6	99	55.229	ENSGAFG00000008130	xrcc6	99	55.229	Gambusia_affinis
ENSCSAG00000005784	XRCC6	99	54.098	ENSGACG00000004868	xrcc6	99	54.098	Gasterosteus_aculeatus
ENSCSAG00000005784	XRCC6	99	73.849	ENSGAGG00000017518	XRCC6	99	74.013	Gopherus_agassizii
ENSCSAG00000005784	XRCC6	100	99.179	ENSGGOG00000015885	XRCC6	100	99.179	Gorilla_gorilla
ENSCSAG00000005784	XRCC6	91	56.506	ENSHBUG00000023281	xrcc6	99	56.506	Haplochromis_burtoni
ENSCSAG00000005784	XRCC6	99	83.855	ENSHGLG00000018078	XRCC6	99	83.855	Heterocephalus_glaber_female
ENSCSAG00000005784	XRCC6	99	83.855	ENSHGLG00100011264	XRCC6	99	83.855	Heterocephalus_glaber_male
ENSCSAG00000005784	XRCC6	99	53.618	ENSHCOG00000009821	xrcc6	99	53.947	Hippocampus_comes
ENSCSAG00000005784	XRCC6	95	57.509	ENSIPUG00000000767	xrcc6	96	57.509	Ictalurus_punctatus
ENSCSAG00000005784	XRCC6	99	88.158	ENSSTOG00000009490	XRCC6	99	87.993	Ictidomys_tridecemlineatus
ENSCSAG00000005784	XRCC6	99	78.618	ENSJJAG00000017136	Xrcc6	99	79.605	Jaculus_jaculus
ENSCSAG00000005784	XRCC6	99	56.322	ENSKMAG00000002141	xrcc6	99	56.158	Kryptolebias_marmoratus
ENSCSAG00000005784	XRCC6	99	55.556	ENSLBEG00000002691	xrcc6	99	55.556	Labrus_bergylta
ENSCSAG00000005784	XRCC6	90	58.824	ENSLOCG00000011533	xrcc6	99	58.824	Lepisosteus_oculatus
ENSCSAG00000005784	XRCC6	100	100.000	ENSMFAG00000003352	XRCC6	100	100.000	Macaca_fascicularis
ENSCSAG00000005784	XRCC6	100	100.000	ENSMMUG00000001856	XRCC6	100	100.000	Macaca_mulatta
ENSCSAG00000005784	XRCC6	100	100.000	ENSMNEG00000035076	XRCC6	100	100.000	Macaca_nemestrina
ENSCSAG00000005784	XRCC6	100	100.000	ENSMLEG00000019869	XRCC6	100	100.000	Mandrillus_leucophaeus
ENSCSAG00000005784	XRCC6	95	55.403	ENSMAMG00000003405	xrcc6	96	55.403	Mastacembelus_armatus
ENSCSAG00000005784	XRCC6	99	54.918	ENSMAMG00000003368	xrcc6	99	55.082	Mastacembelus_armatus
ENSCSAG00000005784	XRCC6	99	56.414	ENSMZEG00005028080	xrcc6	99	55.757	Maylandia_zebra
ENSCSAG00000005784	XRCC6	99	69.722	ENSMGAG00000012146	XRCC6	99	69.494	Meleagris_gallopavo
ENSCSAG00000005784	XRCC6	99	84.211	ENSMAUG00000017340	Xrcc6	99	84.211	Mesocricetus_auratus
ENSCSAG00000005784	XRCC6	99	84.375	ENSMOCG00000015717	Xrcc6	99	84.539	Microtus_ochrogaster
ENSCSAG00000005784	XRCC6	99	55.008	ENSMMOG00000003536	xrcc6	99	55.008	Mola_mola
ENSCSAG00000005784	XRCC6	99	57.401	ENSMALG00000013912	xrcc6	94	57.237	Monopterus_albus
ENSCSAG00000005784	XRCC6	99	77.138	MGP_CAROLIEiJ_G0020067	Xrcc6	99	77.138	Mus_caroli
ENSCSAG00000005784	XRCC6	99	82.895	ENSMUSG00000022471	Xrcc6	99	82.895	Mus_musculus
ENSCSAG00000005784	XRCC6	99	82.072	MGP_PahariEiJ_G0020069	Xrcc6	99	82.072	Mus_pahari
ENSCSAG00000005784	XRCC6	96	83.219	MGP_SPRETEiJ_G0020967	Xrcc6	99	83.477	Mus_spretus
ENSCSAG00000005784	XRCC6	99	83.224	ENSNGAG00000013750	Xrcc6	99	83.224	Nannospalax_galili
ENSCSAG00000005784	XRCC6	99	56.908	ENSNBRG00000004125	xrcc6	99	56.743	Neolamprologus_brichardi
ENSCSAG00000005784	XRCC6	95	83.103	ENSOPRG00000002386	XRCC6	99	83.103	Ochotona_princeps
ENSCSAG00000005784	XRCC6	99	82.208	ENSODEG00000015847	XRCC6	99	82.372	Octodon_degus
ENSCSAG00000005784	XRCC6	99	56.743	ENSONIG00000019715	xrcc6	99	56.908	Oreochromis_niloticus
ENSCSAG00000005784	XRCC6	68	80.097	ENSOANG00000011328	XRCC6	99	80.097	Ornithorhynchus_anatinus
ENSCSAG00000005784	XRCC6	100	86.043	ENSOCUG00000006948	XRCC6	100	86.371	Oryctolagus_cuniculus
ENSCSAG00000005784	XRCC6	99	55.302	ENSORLG00020007820	xrcc6	99	55.574	Oryzias_latipes_hni
ENSCSAG00000005784	XRCC6	99	54.976	ENSORLG00015006406	xrcc6	99	55.246	Oryzias_latipes_hsok
ENSCSAG00000005784	XRCC6	99	54.976	ENSOMEG00000008998	xrcc6	99	54.976	Oryzias_melastigma
ENSCSAG00000005784	XRCC6	99	87.336	ENSOGAG00000008821	XRCC6	99	87.171	Otolemur_garnettii
ENSCSAG00000005784	XRCC6	92	99.490	ENSPPAG00000037167	XRCC6	100	99.490	Pan_paniscus
ENSCSAG00000005784	XRCC6	100	99.179	ENSPTRG00000022548	XRCC6	100	99.179	Pan_troglodytes
ENSCSAG00000005784	XRCC6	100	99.179	ENSPTRG00000045824	XRCC6	100	99.179	Pan_troglodytes
ENSCSAG00000005784	XRCC6	100	99.836	ENSPANG00000001252	XRCC6	100	99.836	Papio_anubis
ENSCSAG00000005784	XRCC6	99	60.526	ENSPKIG00000003974	xrcc6	99	60.526	Paramormyrops_kingsleyae
ENSCSAG00000005784	XRCC6	99	55.372	ENSPMGG00000014220	xrcc6	100	55.537	Periophthalmus_magnuspinnatus
ENSCSAG00000005784	XRCC6	99	83.224	ENSPEMG00000023446	Xrcc6	99	83.224	Peromyscus_maniculatus_bairdii
ENSCSAG00000005784	XRCC6	100	79.016	ENSPCIG00000026409	XRCC6	99	78.852	Phascolarctos_cinereus
ENSCSAG00000005784	XRCC6	99	55.719	ENSPFOG00000017173	xrcc6	99	55.556	Poecilia_formosa
ENSCSAG00000005784	XRCC6	99	55.392	ENSPLAG00000000562	xrcc6	99	55.229	Poecilia_latipinna
ENSCSAG00000005784	XRCC6	99	55.882	ENSPMEG00000018478	xrcc6	99	55.719	Poecilia_mexicana
ENSCSAG00000005784	XRCC6	99	55.700	ENSPREG00000020957	xrcc6	93	55.537	Poecilia_reticulata
ENSCSAG00000005784	XRCC6	100	88.670	ENSPPYG00000011876	XRCC6	100	88.670	Pongo_abelii
ENSCSAG00000005784	XRCC6	99	84.539	ENSPVAG00000001168	XRCC6	99	84.211	Pteropus_vampyrus
ENSCSAG00000005784	XRCC6	99	56.414	ENSPNYG00000003815	xrcc6	99	53.521	Pundamilia_nyererei
ENSCSAG00000005784	XRCC6	99	83.388	ENSRNOG00000006392	Xrcc6	99	83.388	Rattus_norvegicus
ENSCSAG00000005784	XRCC6	100	93.268	ENSRBIG00000039794	XRCC6	100	93.268	Rhinopithecus_bieti
ENSCSAG00000005784	XRCC6	100	100.000	ENSRROG00000030297	XRCC6	100	100.000	Rhinopithecus_roxellana
ENSCSAG00000005784	XRCC6	67	85.504	ENSSBOG00000024724	-	100	85.504	Saimiri_boliviensis_boliviensis
ENSCSAG00000005784	XRCC6	99	78.161	ENSSHAG00000010790	XRCC6	99	77.833	Sarcophilus_harrisii
ENSCSAG00000005784	XRCC6	99	60.820	ENSSFOG00015014409	xrcc6	99	60.656	Scleropages_formosus
ENSCSAG00000005784	XRCC6	99	56.908	ENSSMAG00000006496	xrcc6	99	56.908	Scophthalmus_maximus
ENSCSAG00000005784	XRCC6	99	56.536	ENSSDUG00000007542	xrcc6	99	56.373	Seriola_dumerili
ENSCSAG00000005784	XRCC6	99	55.719	ENSSLDG00000009974	xrcc6	99	55.556	Seriola_lalandi_dorsalis
ENSCSAG00000005784	XRCC6	99	73.892	ENSSPUG00000012086	XRCC6	99	73.563	Sphenodon_punctatus
ENSCSAG00000005784	XRCC6	99	56.373	ENSSPAG00000015199	xrcc6	99	56.209	Stegastes_partitus
ENSCSAG00000005784	XRCC6	96	72.509	ENSTGUG00000009852	-	95	72.509	Taeniopygia_guttata
ENSCSAG00000005784	XRCC6	99	55.263	ENSTRUG00000017070	xrcc6	99	55.099	Takifugu_rubripes
ENSCSAG00000005784	XRCC6	95	56.780	ENSTNIG00000012947	xrcc6	99	56.780	Tetraodon_nigroviridis
ENSCSAG00000005784	XRCC6	95	78.141	ENSTBEG00000011736	XRCC6	99	78.141	Tupaia_belangeri
ENSCSAG00000005784	XRCC6	99	70.888	ENSTTRG00000006749	XRCC6	99	71.217	Tursiops_truncatus
ENSCSAG00000005784	XRCC6	99	55.719	ENSXMAG00000009691	xrcc6	99	55.556	Xiphophorus_maculatus