EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000005870 (Gene tree)
Gene ID: 103216340
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 13174 bases
Position: chr9:90602667-90615840
Accession: 17286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000002175	EXOSC1	PF10447.9	4.2e-15	1	1
ENSCSAP00000002175	ECR1_N	PF14382.6	4.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000003904	EXOSC1-201	1534	-	ENSCSAP00000002175	195 (aa)	-	A0A0D9R0N6

Gene Model

Click here to download ENSCSAG00000005870's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000005870's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000005870	EXOSC1	100	99.487	ENSG00000171311	EXOSC1	100	99.487	Homo_sapiens
ENSCSAG00000005870	EXOSC1	98	79.581	ENSAPOG00000007822	exosc1	98	79.581	Acanthochromis_polyacanthus
ENSCSAG00000005870	EXOSC1	100	96.923	ENSAMEG00000000129	EXOSC1	100	96.923	Ailuropoda_melanoleuca
ENSCSAG00000005870	EXOSC1	96	79.255	ENSACIG00000018956	exosc1	92	79.255	Amphilophus_citrinellus
ENSCSAG00000005870	EXOSC1	98	79.581	ENSAOCG00000010699	exosc1	98	79.581	Amphiprion_ocellaris
ENSCSAG00000005870	EXOSC1	92	70.391	ENSAPEG00000012690	exosc1	96	70.391	Amphiprion_percula
ENSCSAG00000005870	EXOSC1	98	79.058	ENSATEG00000018683	exosc1	98	79.058	Anabas_testudineus
ENSCSAG00000005870	EXOSC1	99	83.938	ENSACAG00000002101	EXOSC1	99	83.938	Anolis_carolinensis
ENSCSAG00000005870	EXOSC1	100	97.949	ENSANAG00000034669	EXOSC1	100	97.949	Aotus_nancymaae
ENSCSAG00000005870	EXOSC1	98	79.581	ENSACLG00000021243	exosc1	98	79.581	Astatotilapia_calliptera
ENSCSAG00000005870	EXOSC1	98	81.152	ENSAMXG00000011116	exosc1	98	81.152	Astyanax_mexicanus
ENSCSAG00000005870	EXOSC1	100	96.410	ENSBTAG00000012699	EXOSC1	100	96.410	Bos_taurus
ENSCSAG00000005870	EXOSC1	92	33.511	WBGene00012966	exos-1	90	33.511	Caenorhabditis_elegans
ENSCSAG00000005870	EXOSC1	100	97.436	ENSCJAG00000016586	EXOSC1	100	97.436	Callithrix_jacchus
ENSCSAG00000005870	EXOSC1	100	96.410	ENSCAFG00000009068	EXOSC1	94	96.410	Canis_familiaris
ENSCSAG00000005870	EXOSC1	100	96.410	ENSCAFG00020006002	EXOSC1	94	96.410	Canis_lupus_dingo
ENSCSAG00000005870	EXOSC1	100	96.410	ENSCHIG00000015253	EXOSC1	100	96.410	Capra_hircus
ENSCSAG00000005870	EXOSC1	100	95.897	ENSTSYG00000000760	EXOSC1	100	95.897	Carlito_syrichta
ENSCSAG00000005870	EXOSC1	100	96.410	ENSCPOG00000001173	EXOSC1	100	96.410	Cavia_porcellus
ENSCSAG00000005870	EXOSC1	100	57.360	ENSCCAG00000023986	EXOSC1	100	57.360	Cebus_capucinus
ENSCSAG00000005870	EXOSC1	100	99.487	ENSCATG00000034114	EXOSC1	100	99.487	Cercocebus_atys
ENSCSAG00000005870	EXOSC1	100	96.923	ENSCLAG00000002463	EXOSC1	100	96.923	Chinchilla_lanigera
ENSCSAG00000005870	EXOSC1	96	82.353	ENSCHOG00000006477	EXOSC1	100	82.353	Choloepus_hoffmanni
ENSCSAG00000005870	EXOSC1	54	82.075	ENSCPBG00000011949	EXOSC1	88	82.075	Chrysemys_picta_bellii
ENSCSAG00000005870	EXOSC1	95	55.615	ENSCING00000022734	-	89	55.615	Ciona_intestinalis
ENSCSAG00000005870	EXOSC1	95	57.219	ENSCSAVG00000010865	-	95	57.219	Ciona_savignyi
ENSCSAG00000005870	EXOSC1	100	99.487	ENSCANG00000034159	EXOSC1	100	99.487	Colobus_angolensis_palliatus
ENSCSAG00000005870	EXOSC1	100	95.385	ENSCGRG00001000335	Exosc1	100	95.385	Cricetulus_griseus_chok1gshd
ENSCSAG00000005870	EXOSC1	100	95.385	ENSCGRG00000011602	Exosc1	100	95.385	Cricetulus_griseus_crigri
ENSCSAG00000005870	EXOSC1	98	66.492	ENSCSEG00000007895	exosc1	95	66.492	Cynoglossus_semilaevis
ENSCSAG00000005870	EXOSC1	98	75.916	ENSCVAG00000016748	exosc1	98	75.916	Cyprinodon_variegatus
ENSCSAG00000005870	EXOSC1	98	80.105	ENSDARG00000059841	exosc1	98	80.105	Danio_rerio
ENSCSAG00000005870	EXOSC1	75	97.297	ENSDNOG00000007983	EXOSC1	100	97.297	Dasypus_novemcinctus
ENSCSAG00000005870	EXOSC1	100	95.897	ENSDORG00000016528	Exosc1	100	95.897	Dipodomys_ordii
ENSCSAG00000005870	EXOSC1	94	48.148	FBgn0032346	Csl4	92	48.148	Drosophila_melanogaster
ENSCSAG00000005870	EXOSC1	100	94.359	ENSETEG00000002469	-	100	94.359	Echinops_telfairi
ENSCSAG00000005870	EXOSC1	99	61.735	ENSEBUG00000008164	exosc1	98	61.735	Eptatretus_burgeri
ENSCSAG00000005870	EXOSC1	100	87.179	ENSEASG00005008684	EXOSC1	100	87.179	Equus_asinus_asinus
ENSCSAG00000005870	EXOSC1	61	78.151	ENSECAG00000010621	EXOSC1	71	78.151	Equus_caballus
ENSCSAG00000005870	EXOSC1	100	96.410	ENSEEUG00000005647	EXOSC1	100	96.410	Erinaceus_europaeus
ENSCSAG00000005870	EXOSC1	94	80.435	ENSELUG00000017369	exosc1	81	80.435	Esox_lucius
ENSCSAG00000005870	EXOSC1	100	96.923	ENSFCAG00000040563	EXOSC1	94	96.923	Felis_catus
ENSCSAG00000005870	EXOSC1	100	82.564	ENSFALG00000008450	EXOSC1	100	82.564	Ficedula_albicollis
ENSCSAG00000005870	EXOSC1	100	96.923	ENSFDAG00000000846	EXOSC1	100	96.923	Fukomys_damarensis
ENSCSAG00000005870	EXOSC1	98	75.916	ENSFHEG00000009154	exosc1	98	75.916	Fundulus_heteroclitus
ENSCSAG00000005870	EXOSC1	98	79.581	ENSGMOG00000008993	exosc1	98	79.581	Gadus_morhua
ENSCSAG00000005870	EXOSC1	100	71.282	ENSGALG00000039917	EXOSC1	100	85.616	Gallus_gallus
ENSCSAG00000005870	EXOSC1	98	76.440	ENSGAFG00000010265	exosc1	94	76.440	Gambusia_affinis
ENSCSAG00000005870	EXOSC1	98	79.581	ENSGACG00000018936	exosc1	98	79.581	Gasterosteus_aculeatus
ENSCSAG00000005870	EXOSC1	100	84.615	ENSGAGG00000019192	EXOSC1	100	84.615	Gopherus_agassizii
ENSCSAG00000005870	EXOSC1	100	85.641	ENSGGOG00000003099	EXOSC1	100	85.641	Gorilla_gorilla
ENSCSAG00000005870	EXOSC1	98	79.581	ENSHBUG00000017857	exosc1	98	79.581	Haplochromis_burtoni
ENSCSAG00000005870	EXOSC1	100	96.410	ENSHGLG00000016927	EXOSC1	100	96.410	Heterocephalus_glaber_female
ENSCSAG00000005870	EXOSC1	100	96.410	ENSHGLG00100012208	EXOSC1	100	96.410	Heterocephalus_glaber_male
ENSCSAG00000005870	EXOSC1	98	78.534	ENSHCOG00000019882	exosc1	98	78.534	Hippocampus_comes
ENSCSAG00000005870	EXOSC1	98	79.581	ENSIPUG00000007685	exosc1	98	79.581	Ictalurus_punctatus
ENSCSAG00000005870	EXOSC1	100	96.923	ENSSTOG00000006615	EXOSC1	100	96.923	Ictidomys_tridecemlineatus
ENSCSAG00000005870	EXOSC1	63	81.967	ENSSTOG00000029860	-	93	81.967	Ictidomys_tridecemlineatus
ENSCSAG00000005870	EXOSC1	100	95.897	ENSJJAG00000013311	Exosc1	100	95.897	Jaculus_jaculus
ENSCSAG00000005870	EXOSC1	98	77.604	ENSKMAG00000001202	exosc1	81	77.604	Kryptolebias_marmoratus
ENSCSAG00000005870	EXOSC1	98	79.058	ENSLBEG00000011448	exosc1	98	79.058	Labrus_bergylta
ENSCSAG00000005870	EXOSC1	98	59.091	ENSLOCG00000003776	exosc1	99	59.091	Lepisosteus_oculatus
ENSCSAG00000005870	EXOSC1	100	96.410	ENSLAFG00000015983	EXOSC1	100	96.410	Loxodonta_africana
ENSCSAG00000005870	EXOSC1	100	99.487	ENSMFAG00000001493	EXOSC1	100	99.487	Macaca_fascicularis
ENSCSAG00000005870	EXOSC1	100	99.487	ENSMMUG00000020028	EXOSC1	100	92.462	Macaca_mulatta
ENSCSAG00000005870	EXOSC1	100	99.487	ENSMNEG00000029816	EXOSC1	100	99.487	Macaca_nemestrina
ENSCSAG00000005870	EXOSC1	100	93.846	ENSMLEG00000027643	EXOSC1	100	93.846	Mandrillus_leucophaeus
ENSCSAG00000005870	EXOSC1	98	80.105	ENSMAMG00000012200	exosc1	98	80.105	Mastacembelus_armatus
ENSCSAG00000005870	EXOSC1	98	79.581	ENSMZEG00005007042	exosc1	98	79.581	Maylandia_zebra
ENSCSAG00000005870	EXOSC1	100	83.590	ENSMAUG00000020462	-	100	83.590	Mesocricetus_auratus
ENSCSAG00000005870	EXOSC1	100	96.410	ENSMICG00000007664	EXOSC1	92	96.410	Microcebus_murinus
ENSCSAG00000005870	EXOSC1	97	88.947	ENSMOCG00000017124	-	97	88.947	Microtus_ochrogaster
ENSCSAG00000005870	EXOSC1	100	95.385	ENSMOCG00000006004	-	100	95.385	Microtus_ochrogaster
ENSCSAG00000005870	EXOSC1	99	60.309	ENSMMOG00000021403	exosc1	99	60.309	Mola_mola
ENSCSAG00000005870	EXOSC1	100	91.327	ENSMODG00000004213	EXOSC1	100	91.327	Monodelphis_domestica
ENSCSAG00000005870	EXOSC1	94	80.435	ENSMALG00000007061	exosc1	92	80.435	Monopterus_albus
ENSCSAG00000005870	EXOSC1	100	94.872	MGP_CAROLIEiJ_G0022959	Exosc1	100	94.872	Mus_caroli
ENSCSAG00000005870	EXOSC1	100	95.385	ENSMUSG00000034321	Exosc1	100	95.385	Mus_musculus
ENSCSAG00000005870	EXOSC1	100	95.385	MGP_PahariEiJ_G0014449	Exosc1	100	95.385	Mus_pahari
ENSCSAG00000005870	EXOSC1	100	94.872	MGP_SPRETEiJ_G0023880	Exosc1	100	94.872	Mus_spretus
ENSCSAG00000005870	EXOSC1	100	96.923	ENSMPUG00000017044	EXOSC1	100	96.923	Mustela_putorius_furo
ENSCSAG00000005870	EXOSC1	100	96.410	ENSMLUG00000009228	EXOSC1	100	96.410	Myotis_lucifugus
ENSCSAG00000005870	EXOSC1	100	94.359	ENSNGAG00000022033	Exosc1	100	94.359	Nannospalax_galili
ENSCSAG00000005870	EXOSC1	98	60.733	ENSNBRG00000024007	exosc1	97	60.733	Neolamprologus_brichardi
ENSCSAG00000005870	EXOSC1	100	98.974	ENSNLEG00000013872	EXOSC1	100	98.974	Nomascus_leucogenys
ENSCSAG00000005870	EXOSC1	59	90.435	ENSMEUG00000002246	EXOSC1	100	90.435	Notamacropus_eugenii
ENSCSAG00000005870	EXOSC1	100	94.872	ENSOPRG00000005065	EXOSC1	100	94.872	Ochotona_princeps
ENSCSAG00000005870	EXOSC1	100	96.410	ENSODEG00000016709	EXOSC1	100	96.410	Octodon_degus
ENSCSAG00000005870	EXOSC1	98	79.581	ENSONIG00000017683	exosc1	98	79.581	Oreochromis_niloticus
ENSCSAG00000005870	EXOSC1	59	93.913	ENSOANG00000006563	EXOSC1	98	91.935	Ornithorhynchus_anatinus
ENSCSAG00000005870	EXOSC1	100	95.408	ENSOCUG00000011898	-	100	95.408	Oryctolagus_cuniculus
ENSCSAG00000005870	EXOSC1	100	90.256	ENSOCUG00000026461	-	100	90.256	Oryctolagus_cuniculus
ENSCSAG00000005870	EXOSC1	98	78.125	ENSORLG00000011595	exosc1	98	78.125	Oryzias_latipes
ENSCSAG00000005870	EXOSC1	98	78.125	ENSORLG00020005831	exosc1	98	78.125	Oryzias_latipes_hni
ENSCSAG00000005870	EXOSC1	98	78.125	ENSORLG00015004317	exosc1	98	78.125	Oryzias_latipes_hsok
ENSCSAG00000005870	EXOSC1	98	63.351	ENSOMEG00000013907	exosc1	98	63.351	Oryzias_melastigma
ENSCSAG00000005870	EXOSC1	100	96.923	ENSOGAG00000016259	EXOSC1	100	96.923	Otolemur_garnettii
ENSCSAG00000005870	EXOSC1	100	95.897	ENSOARG00000010136	EXOSC1	100	95.897	Ovis_aries
ENSCSAG00000005870	EXOSC1	100	93.401	ENSPPAG00000039842	EXOSC1	100	93.401	Pan_paniscus
ENSCSAG00000005870	EXOSC1	100	96.923	ENSPPRG00000023366	EXOSC1	100	96.923	Panthera_pardus
ENSCSAG00000005870	EXOSC1	100	96.923	ENSPTIG00000017701	EXOSC1	100	96.923	Panthera_tigris_altaica
ENSCSAG00000005870	EXOSC1	100	99.487	ENSPTRG00000002808	EXOSC1	100	99.487	Pan_troglodytes
ENSCSAG00000005870	EXOSC1	100	99.487	ENSPANG00000021324	EXOSC1	100	99.487	Papio_anubis
ENSCSAG00000005870	EXOSC1	98	80.105	ENSPKIG00000016037	exosc1	98	80.105	Paramormyrops_kingsleyae
ENSCSAG00000005870	EXOSC1	75	81.507	ENSPSIG00000013571	EXOSC1	98	79.508	Pelodiscus_sinensis
ENSCSAG00000005870	EXOSC1	98	66.492	ENSPMGG00000014002	exosc1	98	66.492	Periophthalmus_magnuspinnatus
ENSCSAG00000005870	EXOSC1	100	95.385	ENSPEMG00000010710	-	100	95.385	Peromyscus_maniculatus_bairdii
ENSCSAG00000005870	EXOSC1	95	71.123	ENSPMAG00000000195	exosc1	95	71.123	Petromyzon_marinus
ENSCSAG00000005870	EXOSC1	100	92.308	ENSPCIG00000002210	EXOSC1	99	92.308	Phascolarctos_cinereus
ENSCSAG00000005870	EXOSC1	98	75.916	ENSPFOG00000006755	exosc1	94	75.916	Poecilia_formosa
ENSCSAG00000005870	EXOSC1	98	75.916	ENSPLAG00000005880	exosc1	98	75.916	Poecilia_latipinna
ENSCSAG00000005870	EXOSC1	98	75.916	ENSPMEG00000015598	exosc1	94	75.916	Poecilia_mexicana
ENSCSAG00000005870	EXOSC1	98	64.062	ENSPREG00000000405	exosc1	93	64.062	Poecilia_reticulata
ENSCSAG00000005870	EXOSC1	100	98.974	ENSPPYG00000002531	EXOSC1	100	98.974	Pongo_abelii
ENSCSAG00000005870	EXOSC1	100	95.897	ENSPCAG00000009135	EXOSC1	100	95.897	Procavia_capensis
ENSCSAG00000005870	EXOSC1	100	90.256	ENSPCOG00000027539	EXOSC1	100	90.256	Propithecus_coquereli
ENSCSAG00000005870	EXOSC1	100	96.923	ENSPVAG00000003372	EXOSC1	100	96.923	Pteropus_vampyrus
ENSCSAG00000005870	EXOSC1	98	79.581	ENSPNYG00000021745	exosc1	98	79.581	Pundamilia_nyererei
ENSCSAG00000005870	EXOSC1	98	80.105	ENSPNAG00000001944	exosc1	98	80.105	Pygocentrus_nattereri
ENSCSAG00000005870	EXOSC1	100	95.385	ENSRNOG00000048708	Exosc1	100	95.385	Rattus_norvegicus
ENSCSAG00000005870	EXOSC1	100	99.487	ENSRBIG00000035618	EXOSC1	100	99.487	Rhinopithecus_bieti
ENSCSAG00000005870	EXOSC1	100	99.487	ENSRROG00000032589	EXOSC1	92	99.487	Rhinopithecus_roxellana
ENSCSAG00000005870	EXOSC1	64	36.250	YNL232W	CSL4	54	36.250	Saccharomyces_cerevisiae
ENSCSAG00000005870	EXOSC1	100	97.949	ENSSBOG00000000359	EXOSC1	100	97.949	Saimiri_boliviensis_boliviensis
ENSCSAG00000005870	EXOSC1	75	94.558	ENSSHAG00000018219	EXOSC1	100	94.558	Sarcophilus_harrisii
ENSCSAG00000005870	EXOSC1	98	81.152	ENSSFOG00015009069	exosc1	98	81.152	Scleropages_formosus
ENSCSAG00000005870	EXOSC1	97	78.421	ENSSFOG00015016289	-	98	78.421	Scleropages_formosus
ENSCSAG00000005870	EXOSC1	98	80.105	ENSSMAG00000003721	exosc1	98	80.105	Scophthalmus_maximus
ENSCSAG00000005870	EXOSC1	98	80.105	ENSSDUG00000002993	exosc1	98	80.105	Seriola_dumerili
ENSCSAG00000005870	EXOSC1	98	80.105	ENSSLDG00000025181	exosc1	98	80.105	Seriola_lalandi_dorsalis
ENSCSAG00000005870	EXOSC1	100	83.077	ENSSARG00000000162	EXOSC1	100	83.077	Sorex_araneus
ENSCSAG00000005870	EXOSC1	99	84.021	ENSSPUG00000012263	EXOSC1	99	84.021	Sphenodon_punctatus
ENSCSAG00000005870	EXOSC1	98	71.204	ENSSPAG00000016792	exosc1	82	71.204	Stegastes_partitus
ENSCSAG00000005870	EXOSC1	100	95.897	ENSSSCG00000010518	EXOSC1	91	95.897	Sus_scrofa
ENSCSAG00000005870	EXOSC1	98	80.729	ENSTGUG00000009692	EXOSC1	99	80.729	Taeniopygia_guttata
ENSCSAG00000005870	EXOSC1	97	73.545	ENSTRUG00000007706	exosc1	98	73.545	Takifugu_rubripes
ENSCSAG00000005870	EXOSC1	97	73.438	ENSTNIG00000014079	exosc1	97	73.438	Tetraodon_nigroviridis
ENSCSAG00000005870	EXOSC1	100	88.205	ENSTBEG00000006011	EXOSC1	100	88.205	Tupaia_belangeri
ENSCSAG00000005870	EXOSC1	94	96.739	ENSTTRG00000009887	EXOSC1	100	96.739	Tursiops_truncatus
ENSCSAG00000005870	EXOSC1	100	79.487	ENSUAMG00000010266	EXOSC1	100	79.487	Ursus_americanus
ENSCSAG00000005870	EXOSC1	100	80.513	ENSUMAG00000022002	EXOSC1	100	80.513	Ursus_maritimus
ENSCSAG00000005870	EXOSC1	100	96.410	ENSVVUG00000023192	EXOSC1	63	96.410	Vulpes_vulpes
ENSCSAG00000005870	EXOSC1	98	78.125	ENSXETG00000003434	exosc1	99	78.125	Xenopus_tropicalis
ENSCSAG00000005870	EXOSC1	62	83.333	ENSXCOG00000014499	exosc1	92	83.333	Xiphophorus_couchianus
ENSCSAG00000005870	EXOSC1	98	64.583	ENSXMAG00000023382	exosc1	93	64.583	Xiphophorus_maculatus