EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000005994 (Gene tree)
Gene ID: 103235350
Gene Symbol: CLP1
Alias: HEAB|hClp1
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 4107 bases
Position: chr1:15568976-15573082
Accession: 103235350
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000002296	Clp1	PF06807.14	1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000004029	CLP1-201	1881	-	ENSCSAP00000002296	425 (aa)	XP_007996426	A0A0D9R107

Gene Model

Click here to download ENSCSAG00000005994's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000005994's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000005994	CLP1	100	100.000	ENSG00000172409	CLP1	100	100.000	Homo_sapiens
ENSCSAG00000005994	CLP1	98	77.123	ENSAPOG00000008242	clp1	96	77.123	Acanthochromis_polyacanthus
ENSCSAG00000005994	CLP1	100	99.529	ENSAMEG00000014551	CLP1	98	99.529	Ailuropoda_melanoleuca
ENSCSAG00000005994	CLP1	98	76.415	ENSACIG00000006310	clp1	95	76.415	Amphilophus_citrinellus
ENSCSAG00000005994	CLP1	100	75.751	ENSAOCG00000010681	clp1	100	75.751	Amphiprion_ocellaris
ENSCSAG00000005994	CLP1	98	77.123	ENSAPEG00000012165	clp1	99	77.123	Amphiprion_percula
ENSCSAG00000005994	CLP1	99	76.566	ENSATEG00000012374	clp1	98	76.566	Anabas_testudineus
ENSCSAG00000005994	CLP1	100	94.353	ENSACAG00000007139	CLP1	100	94.353	Anolis_carolinensis
ENSCSAG00000005994	CLP1	100	100.000	ENSANAG00000034935	CLP1	100	100.000	Aotus_nancymaae
ENSCSAG00000005994	CLP1	99	75.638	ENSACLG00000013573	clp1	98	75.638	Astatotilapia_calliptera
ENSCSAG00000005994	CLP1	97	78.860	ENSAMXG00000014194	clp1	98	78.860	Astyanax_mexicanus
ENSCSAG00000005994	CLP1	100	99.529	ENSBTAG00000006493	CLP1	100	99.529	Bos_taurus
ENSCSAG00000005994	CLP1	96	47.962	WBGene00010304	clpf-1	97	47.962	Caenorhabditis_elegans
ENSCSAG00000005994	CLP1	100	100.000	ENSCJAG00000008748	CLP1	100	100.000	Callithrix_jacchus
ENSCSAG00000005994	CLP1	100	99.529	ENSCAFG00000007815	CLP1	100	99.529	Canis_familiaris
ENSCSAG00000005994	CLP1	100	99.529	ENSCAFG00020000903	CLP1	100	99.529	Canis_lupus_dingo
ENSCSAG00000005994	CLP1	100	98.824	ENSCHIG00000023497	CLP1	100	98.824	Capra_hircus
ENSCSAG00000005994	CLP1	100	99.529	ENSTSYG00000006824	CLP1	99	99.529	Carlito_syrichta
ENSCSAG00000005994	CLP1	100	99.294	ENSCAPG00000009703	CLP1	100	99.294	Cavia_aperea
ENSCSAG00000005994	CLP1	98	99.519	ENSCPOG00000012554	CLP1	99	99.519	Cavia_porcellus
ENSCSAG00000005994	CLP1	100	99.529	ENSCCAG00000031957	CLP1	100	99.529	Cebus_capucinus
ENSCSAG00000005994	CLP1	100	100.000	ENSCATG00000044628	CLP1	100	100.000	Cercocebus_atys
ENSCSAG00000005994	CLP1	100	99.765	ENSCLAG00000004094	CLP1	100	99.765	Chinchilla_lanigera
ENSCSAG00000005994	CLP1	100	94.353	ENSCPBG00000016843	CLP1	100	94.353	Chrysemys_picta_bellii
ENSCSAG00000005994	CLP1	99	63.507	ENSCING00000003779	-	98	63.507	Ciona_intestinalis
ENSCSAG00000005994	CLP1	99	63.270	ENSCSAVG00000003437	-	99	63.270	Ciona_savignyi
ENSCSAG00000005994	CLP1	100	100.000	ENSCANG00000034335	CLP1	100	100.000	Colobus_angolensis_palliatus
ENSCSAG00000005994	CLP1	100	98.824	ENSCGRG00001002227	CLP1	100	98.824	Cricetulus_griseus_chok1gshd
ENSCSAG00000005994	CLP1	100	98.824	ENSCGRG00000004328	CLP1	100	98.824	Cricetulus_griseus_crigri
ENSCSAG00000005994	CLP1	99	74.942	ENSCSEG00000008614	clp1	98	74.942	Cynoglossus_semilaevis
ENSCSAG00000005994	CLP1	99	76.102	ENSCVAG00000020101	clp1	98	76.102	Cyprinodon_variegatus
ENSCSAG00000005994	CLP1	97	79.952	ENSDARG00000063663	clp1	95	79.952	Danio_rerio
ENSCSAG00000005994	CLP1	99	99.528	ENSDNOG00000042415	CLP1	90	99.528	Dasypus_novemcinctus
ENSCSAG00000005994	CLP1	100	99.294	ENSDORG00000014685	Clp1	100	99.294	Dipodomys_ordii
ENSCSAG00000005994	CLP1	96	56.553	FBgn0033842	cbc	97	56.553	Drosophila_melanogaster
ENSCSAG00000005994	CLP1	100	99.765	ENSETEG00000003009	CLP1	100	99.765	Echinops_telfairi
ENSCSAG00000005994	CLP1	97	72.155	ENSEBUG00000011648	clp1	97	72.155	Eptatretus_burgeri
ENSCSAG00000005994	CLP1	100	99.765	ENSEASG00005002093	CLP1	100	99.765	Equus_asinus_asinus
ENSCSAG00000005994	CLP1	100	99.765	ENSECAG00000011597	CLP1	100	99.765	Equus_caballus
ENSCSAG00000005994	CLP1	100	98.588	ENSEEUG00000012771	CLP1	100	98.588	Erinaceus_europaeus
ENSCSAG00000005994	CLP1	97	79.810	ENSELUG00000024048	clp1	95	79.810	Esox_lucius
ENSCSAG00000005994	CLP1	100	99.294	ENSFCAG00000006633	CLP1	100	99.294	Felis_catus
ENSCSAG00000005994	CLP1	100	92.706	ENSFALG00000011145	CLP1	100	92.706	Ficedula_albicollis
ENSCSAG00000005994	CLP1	100	99.765	ENSFDAG00000000234	CLP1	100	99.765	Fukomys_damarensis
ENSCSAG00000005994	CLP1	99	75.406	ENSFHEG00000014760	CLP1	98	75.406	Fundulus_heteroclitus
ENSCSAG00000005994	CLP1	97	80.144	ENSGMOG00000019340	clp1	95	80.144	Gadus_morhua
ENSCSAG00000005994	CLP1	100	93.412	ENSGALG00000007370	CLP1	100	93.412	Gallus_gallus
ENSCSAG00000005994	CLP1	99	75.870	ENSGAFG00000003020	clp1	99	75.870	Gambusia_affinis
ENSCSAG00000005994	CLP1	99	77.030	ENSGACG00000017832	clp1	98	77.030	Gasterosteus_aculeatus
ENSCSAG00000005994	CLP1	100	94.353	ENSGAGG00000013279	CLP1	100	94.353	Gopherus_agassizii
ENSCSAG00000005994	CLP1	100	100.000	ENSGGOG00000023006	CLP1	100	100.000	Gorilla_gorilla
ENSCSAG00000005994	CLP1	99	75.638	ENSHBUG00000010436	clp1	98	75.638	Haplochromis_burtoni
ENSCSAG00000005994	CLP1	100	99.765	ENSHGLG00000009914	CLP1	100	99.765	Heterocephalus_glaber_female
ENSCSAG00000005994	CLP1	100	99.765	ENSHGLG00100006105	CLP1	100	99.765	Heterocephalus_glaber_male
ENSCSAG00000005994	CLP1	99	77.011	ENSHCOG00000010072	clp1	99	77.011	Hippocampus_comes
ENSCSAG00000005994	CLP1	97	79.286	ENSIPUG00000016238	clp1	94	79.097	Ictalurus_punctatus
ENSCSAG00000005994	CLP1	100	99.765	ENSSTOG00000029257	CLP1	100	99.765	Ictidomys_tridecemlineatus
ENSCSAG00000005994	CLP1	100	99.059	ENSJJAG00000023691	Clp1	100	99.059	Jaculus_jaculus
ENSCSAG00000005994	CLP1	99	75.406	ENSKMAG00000011990	clp1	98	75.406	Kryptolebias_marmoratus
ENSCSAG00000005994	CLP1	99	76.798	ENSLBEG00000010201	clp1	98	76.798	Labrus_bergylta
ENSCSAG00000005994	CLP1	100	85.647	ENSLACG00000003160	CLP1	100	85.647	Latimeria_chalumnae
ENSCSAG00000005994	CLP1	73	76.708	ENSLOCG00000008074	clp1	100	77.640	Lepisosteus_oculatus
ENSCSAG00000005994	CLP1	100	99.529	ENSLAFG00000014907	CLP1	100	99.529	Loxodonta_africana
ENSCSAG00000005994	CLP1	100	100.000	ENSMFAG00000046074	CLP1	100	100.000	Macaca_fascicularis
ENSCSAG00000005994	CLP1	100	100.000	ENSMMUG00000038007	CLP1	99	100.000	Macaca_mulatta
ENSCSAG00000005994	CLP1	100	100.000	ENSMNEG00000000259	CLP1	100	100.000	Macaca_nemestrina
ENSCSAG00000005994	CLP1	100	100.000	ENSMLEG00000043556	CLP1	100	100.000	Mandrillus_leucophaeus
ENSCSAG00000005994	CLP1	100	75.982	ENSMAMG00000002149	clp1	98	75.982	Mastacembelus_armatus
ENSCSAG00000005994	CLP1	99	75.638	ENSMZEG00005002850	clp1	98	75.638	Maylandia_zebra
ENSCSAG00000005994	CLP1	100	93.412	ENSMGAG00000009643	CLP1	100	93.412	Meleagris_gallopavo
ENSCSAG00000005994	CLP1	100	98.118	ENSMAUG00000016261	Clp1	100	98.118	Mesocricetus_auratus
ENSCSAG00000005994	CLP1	100	99.529	ENSMICG00000004895	CLP1	100	99.529	Microcebus_murinus
ENSCSAG00000005994	CLP1	100	99.059	ENSMOCG00000005498	Clp1	100	99.059	Microtus_ochrogaster
ENSCSAG00000005994	CLP1	98	78.538	ENSMMOG00000003229	clp1	96	78.538	Mola_mola
ENSCSAG00000005994	CLP1	100	97.412	ENSMODG00000024148	-	100	97.412	Monodelphis_domestica
ENSCSAG00000005994	CLP1	100	97.412	ENSMODG00000020107	-	100	97.412	Monodelphis_domestica
ENSCSAG00000005994	CLP1	99	75.172	ENSMALG00000014239	clp1	99	75.172	Monopterus_albus
ENSCSAG00000005994	CLP1	100	98.588	MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	Mus_caroli
ENSCSAG00000005994	CLP1	100	98.588	ENSMUSG00000027079	Clp1	100	98.588	Mus_musculus
ENSCSAG00000005994	CLP1	100	98.353	MGP_PahariEiJ_G0025177	Clp1	100	98.353	Mus_pahari
ENSCSAG00000005994	CLP1	100	98.588	MGP_SPRETEiJ_G0024646	Clp1	100	98.588	Mus_spretus
ENSCSAG00000005994	CLP1	100	99.529	ENSMPUG00000000268	CLP1	100	99.529	Mustela_putorius_furo
ENSCSAG00000005994	CLP1	100	99.059	ENSMLUG00000007904	CLP1	100	99.059	Myotis_lucifugus
ENSCSAG00000005994	CLP1	100	99.294	ENSNGAG00000006165	Clp1	100	99.294	Nannospalax_galili
ENSCSAG00000005994	CLP1	99	75.638	ENSNBRG00000005225	clp1	98	75.638	Neolamprologus_brichardi
ENSCSAG00000005994	CLP1	82	97.980	ENSNLEG00000012809	-	100	97.980	Nomascus_leucogenys
ENSCSAG00000005994	CLP1	100	97.412	ENSMEUG00000010949	CLP1	99	97.412	Notamacropus_eugenii
ENSCSAG00000005994	CLP1	70	99.329	ENSOPRG00000007329	CLP1	100	99.329	Ochotona_princeps
ENSCSAG00000005994	CLP1	100	99.765	ENSODEG00000011410	CLP1	100	99.765	Octodon_degus
ENSCSAG00000005994	CLP1	99	75.406	ENSONIG00000005089	clp1	98	75.406	Oreochromis_niloticus
ENSCSAG00000005994	CLP1	100	99.529	ENSOCUG00000007045	CLP1	100	99.529	Oryctolagus_cuniculus
ENSCSAG00000005994	CLP1	99	74.710	ENSORLG00000003647	clp1	98	74.710	Oryzias_latipes
ENSCSAG00000005994	CLP1	99	74.478	ENSORLG00020016676	clp1	98	74.478	Oryzias_latipes_hni
ENSCSAG00000005994	CLP1	99	74.710	ENSORLG00015019484	clp1	98	74.710	Oryzias_latipes_hsok
ENSCSAG00000005994	CLP1	99	75.406	ENSOMEG00000021303	clp1	98	75.406	Oryzias_melastigma
ENSCSAG00000005994	CLP1	100	99.294	ENSOGAG00000004508	CLP1	100	99.294	Otolemur_garnettii
ENSCSAG00000005994	CLP1	100	97.882	ENSOARG00000010145	CLP1	98	97.882	Ovis_aries
ENSCSAG00000005994	CLP1	100	100.000	ENSPPAG00000041519	CLP1	100	100.000	Pan_paniscus
ENSCSAG00000005994	CLP1	100	99.294	ENSPPRG00000006135	CLP1	100	99.294	Panthera_pardus
ENSCSAG00000005994	CLP1	100	99.294	ENSPTIG00000015866	CLP1	100	99.294	Panthera_tigris_altaica
ENSCSAG00000005994	CLP1	100	100.000	ENSPTRG00000047318	CLP1	100	100.000	Pan_troglodytes
ENSCSAG00000005994	CLP1	100	100.000	ENSPANG00000017078	CLP1	97	100.000	Papio_anubis
ENSCSAG00000005994	CLP1	97	80.630	ENSPKIG00000007697	clp1	94	80.630	Paramormyrops_kingsleyae
ENSCSAG00000005994	CLP1	95	92.289	ENSPSIG00000005468	CLP1	100	92.289	Pelodiscus_sinensis
ENSCSAG00000005994	CLP1	99	76.267	ENSPMGG00000012171	clp1	99	76.267	Periophthalmus_magnuspinnatus
ENSCSAG00000005994	CLP1	100	99.059	ENSPEMG00000011213	-	100	99.059	Peromyscus_maniculatus_bairdii
ENSCSAG00000005994	CLP1	100	76.291	ENSPMAG00000006707	clp1	100	76.291	Petromyzon_marinus
ENSCSAG00000005994	CLP1	100	96.941	ENSPCIG00000011899	CLP1	99	96.941	Phascolarctos_cinereus
ENSCSAG00000005994	CLP1	99	75.406	ENSPFOG00000008169	clp1	98	75.406	Poecilia_formosa
ENSCSAG00000005994	CLP1	99	75.406	ENSPLAG00000022388	clp1	99	75.406	Poecilia_latipinna
ENSCSAG00000005994	CLP1	99	75.406	ENSPMEG00000021088	clp1	99	75.406	Poecilia_mexicana
ENSCSAG00000005994	CLP1	99	75.638	ENSPREG00000017802	clp1	98	75.638	Poecilia_reticulata
ENSCSAG00000005994	CLP1	53	99.554	ENSPPYG00000003266	-	100	99.554	Pongo_abelii
ENSCSAG00000005994	CLP1	100	99.529	ENSPCOG00000000360	CLP1	98	99.529	Propithecus_coquereli
ENSCSAG00000005994	CLP1	100	99.529	ENSPVAG00000016270	CLP1	100	99.529	Pteropus_vampyrus
ENSCSAG00000005994	CLP1	99	75.638	ENSPNYG00000017274	clp1	97	75.638	Pundamilia_nyererei
ENSCSAG00000005994	CLP1	97	80.000	ENSPNAG00000026460	clp1	95	80.048	Pygocentrus_nattereri
ENSCSAG00000005994	CLP1	100	98.588	ENSRNOG00000007416	Clp1	100	98.588	Rattus_norvegicus
ENSCSAG00000005994	CLP1	100	100.000	ENSRBIG00000018191	CLP1	100	100.000	Rhinopithecus_bieti
ENSCSAG00000005994	CLP1	100	100.000	ENSRROG00000039265	CLP1	100	100.000	Rhinopithecus_roxellana
ENSCSAG00000005994	CLP1	96	79.803	ENSSBOG00000010558	-	93	79.803	Saimiri_boliviensis_boliviensis
ENSCSAG00000005994	CLP1	100	100.000	ENSSBOG00000032517	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSCSAG00000005994	CLP1	100	97.647	ENSSHAG00000015695	CLP1	100	97.647	Sarcophilus_harrisii
ENSCSAG00000005994	CLP1	97	79.294	ENSSFOG00015000628	clp1	96	79.294	Scleropages_formosus
ENSCSAG00000005994	CLP1	99	75.638	ENSSMAG00000019423	clp1	97	75.638	Scophthalmus_maximus
ENSCSAG00000005994	CLP1	98	77.830	ENSSDUG00000014495	clp1	96	77.830	Seriola_dumerili
ENSCSAG00000005994	CLP1	98	77.594	ENSSLDG00000000937	clp1	96	77.594	Seriola_lalandi_dorsalis
ENSCSAG00000005994	CLP1	52	99.103	ENSSARG00000002459	CLP1	100	99.103	Sorex_araneus
ENSCSAG00000005994	CLP1	100	93.647	ENSSPUG00000016811	CLP1	100	93.647	Sphenodon_punctatus
ENSCSAG00000005994	CLP1	98	76.651	ENSSPAG00000016052	clp1	96	76.651	Stegastes_partitus
ENSCSAG00000005994	CLP1	100	99.529	ENSSSCG00000031442	CLP1	100	99.529	Sus_scrofa
ENSCSAG00000005994	CLP1	100	92.471	ENSTGUG00000007002	CLP1	100	92.471	Taeniopygia_guttata
ENSCSAG00000005994	CLP1	99	77.049	ENSTRUG00000012602	clp1	98	77.049	Takifugu_rubripes
ENSCSAG00000005994	CLP1	99	76.581	ENSTNIG00000013125	clp1	98	76.581	Tetraodon_nigroviridis
ENSCSAG00000005994	CLP1	100	98.353	ENSTBEG00000009975	CLP1	100	98.353	Tupaia_belangeri
ENSCSAG00000005994	CLP1	100	99.059	ENSTTRG00000002096	CLP1	100	99.059	Tursiops_truncatus
ENSCSAG00000005994	CLP1	100	99.529	ENSUAMG00000011388	CLP1	100	99.529	Ursus_americanus
ENSCSAG00000005994	CLP1	100	99.529	ENSUMAG00000018317	CLP1	100	99.529	Ursus_maritimus
ENSCSAG00000005994	CLP1	100	99.529	ENSVVUG00000017138	CLP1	97	99.529	Vulpes_vulpes
ENSCSAG00000005994	CLP1	98	77.938	ENSXETG00000007088	clp1	95	78.657	Xenopus_tropicalis
ENSCSAG00000005994	CLP1	99	75.638	ENSXCOG00000002287	clp1	98	75.638	Xiphophorus_couchianus
ENSCSAG00000005994	CLP1	99	75.638	ENSXMAG00000009783	clp1	98	75.638	Xiphophorus_maculatus