EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000006024 (Gene tree)
Gene ID: 103228461
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 32874 bases
Position: chr22:80703774-80736647
Accession: 103228461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000002323	CMS1	PF14617.6	1.9e-33	1	1
ENSCSAP00000002323	DEAD	PF00270.29	3.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000004060	CMSS1-201	1145	-	ENSCSAP00000002323	245 (aa)	XP_007984265	A0A0D9R134

Gene Model

Click here to download ENSCSAG00000006024's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000006024's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000006024	CMSS1	100	96.735	ENSG00000184220	CMSS1	100	96.000	Homo_sapiens
ENSCSAG00000006024	CMSS1	82	64.851	ENSAPOG00000010604	cmss1	82	64.851	Acanthochromis_polyacanthus
ENSCSAG00000006024	CMSS1	99	90.612	ENSAMEG00000004092	CMSS1	95	90.612	Ailuropoda_melanoleuca
ENSCSAG00000006024	CMSS1	82	54.455	ENSACIG00000021854	cmss1	87	48.571	Amphilophus_citrinellus
ENSCSAG00000006024	CMSS1	82	64.851	ENSAOCG00000013361	cmss1	70	64.851	Amphiprion_ocellaris
ENSCSAG00000006024	CMSS1	82	64.851	ENSAPEG00000005829	cmss1	70	64.851	Amphiprion_percula
ENSCSAG00000006024	CMSS1	84	64.078	ENSATEG00000008209	cmss1	83	57.676	Anabas_testudineus
ENSCSAG00000006024	CMSS1	93	68.696	ENSAPLG00000010542	CMSS1	100	68.696	Anas_platyrhynchos
ENSCSAG00000006024	CMSS1	98	65.844	ENSACAG00000011065	CMSS1	89	65.844	Anolis_carolinensis
ENSCSAG00000006024	CMSS1	100	94.694	ENSANAG00000023565	CMSS1	94	94.694	Aotus_nancymaae
ENSCSAG00000006024	CMSS1	82	62.376	ENSACLG00000027294	cmss1	69	62.376	Astatotilapia_calliptera
ENSCSAG00000006024	CMSS1	82	56.000	ENSAMXG00000002046	cmss1	69	56.436	Astyanax_mexicanus
ENSCSAG00000006024	CMSS1	99	88.115	ENSBTAG00000013663	CMSS1	88	88.115	Bos_taurus
ENSCSAG00000006024	CMSS1	100	94.286	ENSCJAG00000000610	CMSS1	94	94.286	Callithrix_jacchus
ENSCSAG00000006024	CMSS1	100	91.429	ENSCAFG00000009230	CMSS1	89	91.429	Canis_familiaris
ENSCSAG00000006024	CMSS1	100	91.429	ENSCAFG00020009464	-	89	91.429	Canis_lupus_dingo
ENSCSAG00000006024	CMSS1	94	84.483	ENSCAFG00020024156	-	72	84.483	Canis_lupus_dingo
ENSCSAG00000006024	CMSS1	99	88.934	ENSCHIG00000013003	CMSS1	88	88.934	Capra_hircus
ENSCSAG00000006024	CMSS1	100	90.612	ENSTSYG00000009266	CMSS1	94	90.612	Carlito_syrichta
ENSCSAG00000006024	CMSS1	91	73.799	ENSCAPG00000013584	CMSS1	100	73.362	Cavia_aperea
ENSCSAG00000006024	CMSS1	100	88.980	ENSCPOG00000014680	CMSS1	88	88.980	Cavia_porcellus
ENSCSAG00000006024	CMSS1	100	95.102	ENSCCAG00000034685	CMSS1	94	95.102	Cebus_capucinus
ENSCSAG00000006024	CMSS1	100	100.000	ENSCATG00000031980	CMSS1	94	100.000	Cercocebus_atys
ENSCSAG00000006024	CMSS1	93	93.886	ENSCLAG00000011241	CMSS1	98	93.886	Chinchilla_lanigera
ENSCSAG00000006024	CMSS1	100	68.571	ENSCHOG00000012098	CMSS1	89	68.571	Choloepus_hoffmanni
ENSCSAG00000006024	CMSS1	77	41.327	ENSCING00000014848	-	100	41.711	Ciona_intestinalis
ENSCSAG00000006024	CMSS1	51	42.063	ENSCSAVG00000002309	-	99	42.063	Ciona_savignyi
ENSCSAG00000006024	CMSS1	100	99.184	ENSCANG00000031337	CMSS1	94	99.184	Colobus_angolensis_palliatus
ENSCSAG00000006024	CMSS1	100	84.490	ENSCGRG00001014305	Cmss1	88	84.490	Cricetulus_griseus_chok1gshd
ENSCSAG00000006024	CMSS1	100	84.898	ENSCGRG00000006722	Cmss1	95	84.898	Cricetulus_griseus_crigri
ENSCSAG00000006024	CMSS1	82	62.871	ENSCSEG00000004958	cmss1	69	62.871	Cynoglossus_semilaevis
ENSCSAG00000006024	CMSS1	82	61.386	ENSCVAG00000005039	cmss1	70	61.386	Cyprinodon_variegatus
ENSCSAG00000006024	CMSS1	92	52.381	ENSDARG00000112579	cmss1	79	52.586	Danio_rerio
ENSCSAG00000006024	CMSS1	100	86.939	ENSDNOG00000040418	CMSS1	87	86.939	Dasypus_novemcinctus
ENSCSAG00000006024	CMSS1	100	89.388	ENSDORG00000010461	Cmss1	88	89.388	Dipodomys_ordii
ENSCSAG00000006024	CMSS1	54	50.000	ENSEBUG00000002156	-	96	50.000	Eptatretus_burgeri
ENSCSAG00000006024	CMSS1	93	92.982	ENSEASG00005010966	CMSS1	99	92.694	Equus_asinus_asinus
ENSCSAG00000006024	CMSS1	99	90.984	ENSECAG00000015662	CMSS1	99	92.035	Equus_caballus
ENSCSAG00000006024	CMSS1	93	62.719	ENSEEUG00000007624	-	82	62.719	Erinaceus_europaeus
ENSCSAG00000006024	CMSS1	98	57.500	ENSELUG00000019459	cmss1	80	57.500	Esox_lucius
ENSCSAG00000006024	CMSS1	100	93.061	ENSFCAG00000044577	CMSS1	88	93.061	Felis_catus
ENSCSAG00000006024	CMSS1	97	64.979	ENSFALG00000005816	CMSS1	100	64.979	Ficedula_albicollis
ENSCSAG00000006024	CMSS1	93	91.228	ENSFDAG00000012577	CMSS1	100	91.228	Fukomys_damarensis
ENSCSAG00000006024	CMSS1	93	60.606	ENSFHEG00000012008	cmss1	95	60.606	Fundulus_heteroclitus
ENSCSAG00000006024	CMSS1	82	61.881	ENSGMOG00000016729	cmss1	72	61.881	Gadus_morhua
ENSCSAG00000006024	CMSS1	94	68.696	ENSGALG00000015267	CMSS1	90	67.521	Gallus_gallus
ENSCSAG00000006024	CMSS1	84	63.768	ENSGAFG00000021217	cmss1	77	63.861	Gambusia_affinis
ENSCSAG00000006024	CMSS1	82	57.426	ENSGACG00000002798	cmss1	85	53.586	Gasterosteus_aculeatus
ENSCSAG00000006024	CMSS1	97	70.042	ENSGAGG00000019861	CMSS1	92	70.042	Gopherus_agassizii
ENSCSAG00000006024	CMSS1	100	97.959	ENSGGOG00000014125	CMSS1	94	97.959	Gorilla_gorilla
ENSCSAG00000006024	CMSS1	82	62.376	ENSHBUG00000008431	cmss1	71	62.376	Haplochromis_burtoni
ENSCSAG00000006024	CMSS1	99	86.885	ENSHGLG00000019481	CMSS1	96	86.885	Heterocephalus_glaber_female
ENSCSAG00000006024	CMSS1	99	87.295	ENSHGLG00100010314	CMSS1	95	87.295	Heterocephalus_glaber_male
ENSCSAG00000006024	CMSS1	90	63.111	ENSHCOG00000003222	cmss1	68	65.842	Hippocampus_comes
ENSCSAG00000006024	CMSS1	90	55.204	ENSIPUG00000011591	cmss1	76	55.204	Ictalurus_punctatus
ENSCSAG00000006024	CMSS1	99	91.803	ENSSTOG00000019366	CMSS1	88	91.803	Ictidomys_tridecemlineatus
ENSCSAG00000006024	CMSS1	99	86.420	ENSJJAG00000014894	Cmss1	90	90.594	Jaculus_jaculus
ENSCSAG00000006024	CMSS1	82	54.455	ENSKMAG00000002390	cmss1	81	54.455	Kryptolebias_marmoratus
ENSCSAG00000006024	CMSS1	90	53.333	ENSLBEG00000006298	cmss1	83	59.113	Labrus_bergylta
ENSCSAG00000006024	CMSS1	93	64.783	ENSLACG00000009293	CMSS1	100	64.783	Latimeria_chalumnae
ENSCSAG00000006024	CMSS1	92	57.269	ENSLOCG00000009391	cmss1	84	55.462	Lepisosteus_oculatus
ENSCSAG00000006024	CMSS1	93	91.667	ENSLAFG00000017509	CMSS1	100	91.667	Loxodonta_africana
ENSCSAG00000006024	CMSS1	100	99.592	ENSMFAG00000045006	CMSS1	94	99.592	Macaca_fascicularis
ENSCSAG00000006024	CMSS1	100	99.184	ENSMMUG00000002939	CMSS1	98	98.636	Macaca_mulatta
ENSCSAG00000006024	CMSS1	100	99.184	ENSMNEG00000031315	CMSS1	94	99.184	Macaca_nemestrina
ENSCSAG00000006024	CMSS1	100	99.592	ENSMLEG00000033660	CMSS1	94	99.592	Mandrillus_leucophaeus
ENSCSAG00000006024	CMSS1	82	63.366	ENSMAMG00000017176	cmss1	70	63.366	Mastacembelus_armatus
ENSCSAG00000006024	CMSS1	82	62.376	ENSMZEG00005021886	cmss1	69	62.376	Maylandia_zebra
ENSCSAG00000006024	CMSS1	93	67.982	ENSMGAG00000014360	CMSS1	100	67.982	Meleagris_gallopavo
ENSCSAG00000006024	CMSS1	100	58.776	ENSMAUG00000020609	Cmss1	85	58.776	Mesocricetus_auratus
ENSCSAG00000006024	CMSS1	100	93.061	ENSMICG00000048977	CMSS1	94	93.061	Microcebus_murinus
ENSCSAG00000006024	CMSS1	100	82.449	ENSMOCG00000021937	Cmss1	88	82.449	Microtus_ochrogaster
ENSCSAG00000006024	CMSS1	82	62.376	ENSMMOG00000019794	cmss1	95	57.511	Mola_mola
ENSCSAG00000006024	CMSS1	100	75.510	ENSMODG00000002275	CMSS1	91	75.510	Monodelphis_domestica
ENSCSAG00000006024	CMSS1	82	63.861	ENSMALG00000004250	cmss1	69	63.861	Monopterus_albus
ENSCSAG00000006024	CMSS1	99	82.857	MGP_CAROLIEiJ_G0020824	Cmss1	88	82.857	Mus_caroli
ENSCSAG00000006024	CMSS1	99	83.673	ENSMUSG00000022748	Cmss1	88	83.673	Mus_musculus
ENSCSAG00000006024	CMSS1	99	82.857	MGP_PahariEiJ_G0016524	Cmss1	88	82.857	Mus_pahari
ENSCSAG00000006024	CMSS1	99	83.265	MGP_SPRETEiJ_G0021724	Cmss1	88	83.265	Mus_spretus
ENSCSAG00000006024	CMSS1	99	93.852	ENSMPUG00000011324	CMSS1	94	93.852	Mustela_putorius_furo
ENSCSAG00000006024	CMSS1	100	91.903	ENSMLUG00000001131	CMSS1	94	91.903	Myotis_lucifugus
ENSCSAG00000006024	CMSS1	99	86.885	ENSNGAG00000020316	Cmss1	87	86.885	Nannospalax_galili
ENSCSAG00000006024	CMSS1	82	61.881	ENSNBRG00000003095	cmss1	69	61.881	Neolamprologus_brichardi
ENSCSAG00000006024	CMSS1	100	98.367	ENSNLEG00000034172	CMSS1	94	98.367	Nomascus_leucogenys
ENSCSAG00000006024	CMSS1	93	66.667	ENSMEUG00000014505	CMSS1	100	66.667	Notamacropus_eugenii
ENSCSAG00000006024	CMSS1	100	91.837	ENSOPRG00000002986	CMSS1	88	91.837	Ochotona_princeps
ENSCSAG00000006024	CMSS1	97	75.630	ENSODEG00000009446	-	92	75.630	Octodon_degus
ENSCSAG00000006024	CMSS1	95	87.124	ENSODEG00000003558	-	86	87.124	Octodon_degus
ENSCSAG00000006024	CMSS1	99	88.477	ENSODEG00000005226	-	87	88.477	Octodon_degus
ENSCSAG00000006024	CMSS1	99	76.955	ENSODEG00000001853	-	87	76.955	Octodon_degus
ENSCSAG00000006024	CMSS1	82	61.386	ENSONIG00000006678	cmss1	88	55.556	Oreochromis_niloticus
ENSCSAG00000006024	CMSS1	100	74.694	ENSOANG00000007529	CMSS1	100	74.678	Ornithorhynchus_anatinus
ENSCSAG00000006024	CMSS1	100	91.429	ENSOCUG00000025366	CMSS1	89	91.429	Oryctolagus_cuniculus
ENSCSAG00000006024	CMSS1	93	60.262	ENSORLG00000020340	cmss1	78	60.262	Oryzias_latipes
ENSCSAG00000006024	CMSS1	93	54.585	ENSORLG00020012235	cmss1	99	54.506	Oryzias_latipes_hni
ENSCSAG00000006024	CMSS1	82	57.426	ENSORLG00015015551	cmss1	75	57.426	Oryzias_latipes_hsok
ENSCSAG00000006024	CMSS1	82	64.851	ENSOMEG00000012555	cmss1	70	64.851	Oryzias_melastigma
ENSCSAG00000006024	CMSS1	93	92.105	ENSOGAG00000002045	CMSS1	100	92.105	Otolemur_garnettii
ENSCSAG00000006024	CMSS1	99	88.980	ENSOARG00000017899	CMSS1	84	88.980	Ovis_aries
ENSCSAG00000006024	CMSS1	100	97.959	ENSPPAG00000038515	CMSS1	90	97.959	Pan_paniscus
ENSCSAG00000006024	CMSS1	100	93.061	ENSPPRG00000016767	CMSS1	88	93.061	Panthera_pardus
ENSCSAG00000006024	CMSS1	100	92.653	ENSPTIG00000018274	CMSS1	88	92.653	Panthera_tigris_altaica
ENSCSAG00000006024	CMSS1	100	97.143	ENSPTRG00000015157	CMSS1	100	97.143	Pan_troglodytes
ENSCSAG00000006024	CMSS1	100	94.694	ENSPANG00000019980	CMSS1	94	94.694	Papio_anubis
ENSCSAG00000006024	CMSS1	92	60.000	ENSPKIG00000012609	cmss1	86	59.829	Paramormyrops_kingsleyae
ENSCSAG00000006024	CMSS1	93	73.362	ENSPSIG00000003849	CMSS1	100	73.362	Pelodiscus_sinensis
ENSCSAG00000006024	CMSS1	96	56.250	ENSPMGG00000010286	cmss1	100	56.356	Periophthalmus_magnuspinnatus
ENSCSAG00000006024	CMSS1	99	84.426	ENSPEMG00000016384	Cmss1	87	84.426	Peromyscus_maniculatus_bairdii
ENSCSAG00000006024	CMSS1	83	52.941	ENSPMAG00000001146	cmss1	99	53.465	Petromyzon_marinus
ENSCSAG00000006024	CMSS1	100	75.510	ENSPCIG00000015656	CMSS1	93	75.510	Phascolarctos_cinereus
ENSCSAG00000006024	CMSS1	82	63.366	ENSPFOG00000016849	cmss1	71	63.366	Poecilia_formosa
ENSCSAG00000006024	CMSS1	82	62.871	ENSPLAG00000008323	cmss1	71	62.871	Poecilia_latipinna
ENSCSAG00000006024	CMSS1	82	63.366	ENSPMEG00000021020	cmss1	70	63.366	Poecilia_mexicana
ENSCSAG00000006024	CMSS1	82	62.871	ENSPREG00000007618	cmss1	69	62.871	Poecilia_reticulata
ENSCSAG00000006024	CMSS1	100	96.735	ENSPPYG00000013606	CMSS1	90	96.735	Pongo_abelii
ENSCSAG00000006024	CMSS1	100	93.061	ENSPCOG00000020035	CMSS1	94	93.061	Propithecus_coquereli
ENSCSAG00000006024	CMSS1	100	79.184	ENSPVAG00000017031	CMSS1	88	79.184	Pteropus_vampyrus
ENSCSAG00000006024	CMSS1	72	64.205	ENSPNYG00000013428	cmss1	65	64.205	Pundamilia_nyererei
ENSCSAG00000006024	CMSS1	93	52.381	ENSPNAG00000007912	cmss1	77	51.695	Pygocentrus_nattereri
ENSCSAG00000006024	CMSS1	99	83.265	ENSRNOG00000027888	Cmss1	94	83.265	Rattus_norvegicus
ENSCSAG00000006024	CMSS1	100	98.776	ENSRBIG00000037931	CMSS1	94	98.776	Rhinopithecus_bieti
ENSCSAG00000006024	CMSS1	100	98.776	ENSRROG00000042910	CMSS1	94	98.776	Rhinopithecus_roxellana
ENSCSAG00000006024	CMSS1	100	94.694	ENSSBOG00000030980	CMSS1	94	94.694	Saimiri_boliviensis_boliviensis
ENSCSAG00000006024	CMSS1	100	75.100	ENSSHAG00000009321	CMSS1	98	75.100	Sarcophilus_harrisii
ENSCSAG00000006024	CMSS1	92	60.870	ENSSFOG00015001509	cmss1	83	60.000	Scleropages_formosus
ENSCSAG00000006024	CMSS1	82	63.861	ENSSMAG00000001653	cmss1	69	63.861	Scophthalmus_maximus
ENSCSAG00000006024	CMSS1	92	59.825	ENSSDUG00000007719	cmss1	80	60.262	Seriola_dumerili
ENSCSAG00000006024	CMSS1	84	63.768	ENSSLDG00000012300	cmss1	75	59.444	Seriola_lalandi_dorsalis
ENSCSAG00000006024	CMSS1	100	75.918	ENSSARG00000003584	CMSS1	87	75.918	Sorex_araneus
ENSCSAG00000006024	CMSS1	92	69.469	ENSSPUG00000003865	CMSS1	100	69.469	Sphenodon_punctatus
ENSCSAG00000006024	CMSS1	84	63.768	ENSSPAG00000019182	cmss1	63	64.356	Stegastes_partitus
ENSCSAG00000006024	CMSS1	100	93.061	ENSSSCG00000011970	CMSS1	88	93.061	Sus_scrofa
ENSCSAG00000006024	CMSS1	93	65.939	ENSTGUG00000013635	CMSS1	100	65.939	Taeniopygia_guttata
ENSCSAG00000006024	CMSS1	82	61.881	ENSTRUG00000015265	cmss1	72	61.881	Takifugu_rubripes
ENSCSAG00000006024	CMSS1	82	56.436	ENSTNIG00000002880	cmss1	73	56.436	Tetraodon_nigroviridis
ENSCSAG00000006024	CMSS1	93	68.421	ENSTBEG00000016722	CMSS1	81	68.421	Tupaia_belangeri
ENSCSAG00000006024	CMSS1	100	88.163	ENSTTRG00000001562	CMSS1	88	88.163	Tursiops_truncatus
ENSCSAG00000006024	CMSS1	99	92.213	ENSUAMG00000024209	CMSS1	100	94.170	Ursus_americanus
ENSCSAG00000006024	CMSS1	99	92.213	ENSUMAG00000001983	CMSS1	94	92.213	Ursus_maritimus
ENSCSAG00000006024	CMSS1	93	75.439	ENSVPAG00000000263	CMSS1	82	75.439	Vicugna_pacos
ENSCSAG00000006024	CMSS1	88	92.593	ENSVVUG00000007776	-	85	92.593	Vulpes_vulpes
ENSCSAG00000006024	CMSS1	100	90.612	ENSVVUG00000021647	-	99	90.612	Vulpes_vulpes
ENSCSAG00000006024	CMSS1	94	60.000	ENSXETG00000011858	cmss1	72	64.356	Xenopus_tropicalis
ENSCSAG00000006024	CMSS1	85	62.981	ENSXCOG00000018724	cmss1	69	63.366	Xiphophorus_couchianus
ENSCSAG00000006024	CMSS1	85	62.981	ENSXMAG00000011243	cmss1	76	63.366	Xiphophorus_maculatus