EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000006297 (Gene tree)
Gene ID: 103230378
Gene Symbol: -
Alias: -
Full Name: eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 26747 bases
Position: chr5:26279544-26306290
Accession: 103230378
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000002589	eIF-3c_N	PF05470.12	1.5e-273	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000004335	-	3039	XM_007989079	ENSCSAP00000002589	913 (aa)	XP_007987270	A0A0D9R1V0

Gene Model

Click here to download ENSCSAG00000006297's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000006297's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000006297	-	100	99.890	ENSG00000184110	EIF3C	100	100.000	Homo_sapiens
ENSCSAG00000006297	-	100	99.781	ENSG00000205609	EIF3CL	100	99.781	Homo_sapiens
ENSCSAG00000006297	-	99	76.004	ENSAPOG00000024092	eif3c	92	84.339	Acanthochromis_polyacanthus
ENSCSAG00000006297	-	100	98.576	ENSAMEG00000015454	-	100	98.576	Ailuropoda_melanoleuca
ENSCSAG00000006297	-	99	73.707	ENSACIG00000015082	eif3c	99	70.346	Amphilophus_citrinellus
ENSCSAG00000006297	-	94	84.158	ENSAOCG00000021466	eif3c	98	76.881	Amphiprion_ocellaris
ENSCSAG00000006297	-	94	84.158	ENSAPEG00000010521	eif3c	98	76.881	Amphiprion_percula
ENSCSAG00000006297	-	99	76.113	ENSATEG00000019001	eif3c	98	76.688	Anabas_testudineus
ENSCSAG00000006297	-	100	86.245	ENSACAG00000005937	-	100	86.354	Anolis_carolinensis
ENSCSAG00000006297	-	100	99.781	ENSANAG00000020640	-	100	99.781	Aotus_nancymaae
ENSCSAG00000006297	-	84	80.619	ENSACLG00000009322	eif3c	92	80.619	Astatotilapia_calliptera
ENSCSAG00000006297	-	84	83.471	ENSACLG00000009347	eif3c	98	83.471	Astatotilapia_calliptera
ENSCSAG00000006297	-	99	76.593	ENSAMXG00000020949	eif3c	100	75.751	Astyanax_mexicanus
ENSCSAG00000006297	-	100	97.919	ENSBTAG00000006543	EIF3CL	100	97.919	Bos_taurus
ENSCSAG00000006297	-	95	42.489	WBGene00001226	eif-3.C	93	43.243	Caenorhabditis_elegans
ENSCSAG00000006297	-	100	99.562	ENSCJAG00000006341	-	100	99.562	Callithrix_jacchus
ENSCSAG00000006297	-	100	98.467	ENSCAFG00000017143	-	100	98.467	Canis_familiaris
ENSCSAG00000006297	-	100	98.576	ENSCAFG00020017587	-	100	98.576	Canis_lupus_dingo
ENSCSAG00000006297	-	100	97.809	ENSCHIG00000024795	-	100	97.809	Capra_hircus
ENSCSAG00000006297	-	100	98.248	ENSTSYG00000003486	-	100	98.248	Carlito_syrichta
ENSCSAG00000006297	-	96	88.562	ENSCAPG00000015887	-	100	88.562	Cavia_aperea
ENSCSAG00000006297	-	100	98.028	ENSCPOG00000007533	-	100	98.028	Cavia_porcellus
ENSCSAG00000006297	-	100	94.414	ENSCCAG00000027724	-	100	94.414	Cebus_capucinus
ENSCSAG00000006297	-	99	84.922	ENSCCAG00000029099	-	98	83.814	Cebus_capucinus
ENSCSAG00000006297	-	100	98.576	ENSCCAG00000034928	-	100	98.576	Cebus_capucinus
ENSCSAG00000006297	-	100	100.000	ENSCATG00000032673	-	100	100.000	Cercocebus_atys
ENSCSAG00000006297	-	100	97.481	ENSCLAG00000011094	-	100	97.481	Chinchilla_lanigera
ENSCSAG00000006297	-	55	82.239	ENSCHOG00000003120	-	88	82.239	Choloepus_hoffmanni
ENSCSAG00000006297	-	71	92.038	ENSCPBG00000012407	-	92	83.537	Chrysemys_picta_bellii
ENSCSAG00000006297	-	79	56.336	ENSCSAVG00000006744	-	96	57.018	Ciona_savignyi
ENSCSAG00000006297	-	100	100.000	ENSCANG00000033626	-	100	100.000	Colobus_angolensis_palliatus
ENSCSAG00000006297	-	100	96.824	ENSCGRG00001015265	EIF3C	100	96.824	Cricetulus_griseus_chok1gshd
ENSCSAG00000006297	-	100	74.563	ENSCSEG00000017770	eif3c	100	74.672	Cynoglossus_semilaevis
ENSCSAG00000006297	-	100	74.732	ENSCVAG00000005402	eif3c	98	81.656	Cyprinodon_variegatus
ENSCSAG00000006297	-	100	75.563	ENSDARG00000016443	eif3c	100	75.482	Danio_rerio
ENSCSAG00000006297	-	100	98.357	ENSDNOG00000031497	-	100	98.357	Dasypus_novemcinctus
ENSCSAG00000006297	-	100	98.248	ENSDORG00000016471	Eif3c	100	98.248	Dipodomys_ordii
ENSCSAG00000006297	-	98	50.887	FBgn0034258	eIF3c	95	50.885	Drosophila_melanogaster
ENSCSAG00000006297	-	92	98.165	ENSETEG00000013527	-	92	98.165	Echinops_telfairi
ENSCSAG00000006297	-	99	62.554	ENSEBUG00000001629	eif3c	99	63.402	Eptatretus_burgeri
ENSCSAG00000006297	-	100	98.467	ENSECAG00000008746	-	100	98.467	Equus_caballus
ENSCSAG00000006297	-	64	64.116	ENSEEUG00000000726	-	64	64.116	Erinaceus_europaeus
ENSCSAG00000006297	-	87	97.494	ENSEEUG00000006148	-	100	97.494	Erinaceus_europaeus
ENSCSAG00000006297	-	99	76.118	ENSELUG00000022257	eif3c	92	83.748	Esox_lucius
ENSCSAG00000006297	-	100	98.357	ENSFCAG00000015782	-	100	98.357	Felis_catus
ENSCSAG00000006297	-	100	97.809	ENSFDAG00000003588	-	100	97.809	Fukomys_damarensis
ENSCSAG00000006297	-	100	75.027	ENSFHEG00000014154	EIF3C	93	83.660	Fundulus_heteroclitus
ENSCSAG00000006297	-	97	75.224	ENSGMOG00000016885	eif3c	99	75.897	Gadus_morhua
ENSCSAG00000006297	-	96	76.644	ENSGACG00000007652	eif3c	100	75.900	Gasterosteus_aculeatus
ENSCSAG00000006297	-	92	83.707	ENSGAGG00000006666	-	100	83.825	Gopherus_agassizii
ENSCSAG00000006297	-	53	99.614	ENSGGOG00000022677	-	100	99.614	Gorilla_gorilla
ENSCSAG00000006297	-	99	97.360	ENSGGOG00000026919	EIF3C	100	99.659	Gorilla_gorilla
ENSCSAG00000006297	-	100	97.590	ENSHGLG00000011445	EIF3C	100	97.590	Heterocephalus_glaber_female
ENSCSAG00000006297	-	100	97.590	ENSHGLG00100000217	EIF3C	100	97.590	Heterocephalus_glaber_male
ENSCSAG00000006297	-	99	75.877	ENSHCOG00000019694	eif3c	97	76.211	Hippocampus_comes
ENSCSAG00000006297	-	99	75.490	ENSIPUG00000016878	eif3c	98	76.362	Ictalurus_punctatus
ENSCSAG00000006297	-	100	98.576	ENSSTOG00000021278	-	100	98.576	Ictidomys_tridecemlineatus
ENSCSAG00000006297	-	100	96.933	ENSJJAG00000012722	Eif3c	100	96.933	Jaculus_jaculus
ENSCSAG00000006297	-	99	76.762	ENSKMAG00000021662	eif3c	97	76.638	Kryptolebias_marmoratus
ENSCSAG00000006297	-	99	75.580	ENSLBEG00000023370	eif3c	99	74.651	Labrus_bergylta
ENSCSAG00000006297	-	100	78.517	ENSLACG00000000770	eif3c	100	80.196	Latimeria_chalumnae
ENSCSAG00000006297	-	100	97.809	ENSLAFG00000027426	-	100	97.809	Loxodonta_africana
ENSCSAG00000006297	-	100	100.000	ENSMFAG00000041930	-	100	100.000	Macaca_fascicularis
ENSCSAG00000006297	-	100	100.000	ENSMMUG00000011798	-	100	100.000	Macaca_mulatta
ENSCSAG00000006297	-	100	100.000	ENSMNEG00000023915	-	100	100.000	Macaca_nemestrina
ENSCSAG00000006297	-	100	100.000	ENSMLEG00000027529	-	100	100.000	Mandrillus_leucophaeus
ENSCSAG00000006297	-	99	78.390	ENSMAMG00000012512	eif3c	95	84.667	Mastacembelus_armatus
ENSCSAG00000006297	-	84	80.782	ENSMZEG00005013685	eif3c	92	80.782	Maylandia_zebra
ENSCSAG00000006297	-	84	83.471	ENSMZEG00005013699	eif3c	98	83.471	Maylandia_zebra
ENSCSAG00000006297	-	100	96.714	ENSMAUG00000010621	Eif3c	100	96.714	Mesocricetus_auratus
ENSCSAG00000006297	-	100	98.357	ENSMICG00000036748	-	100	98.357	Microcebus_murinus
ENSCSAG00000006297	-	100	94.304	ENSMOCG00000004204	Eif3c	100	94.304	Microtus_ochrogaster
ENSCSAG00000006297	-	100	71.991	ENSMMOG00000001572	eif3c	72	82.673	Mola_mola
ENSCSAG00000006297	-	100	94.967	ENSMODG00000015579	-	100	94.967	Monodelphis_domestica
ENSCSAG00000006297	-	85	83.961	ENSMALG00000008907	eif3c	93	83.824	Monopterus_albus
ENSCSAG00000006297	-	100	96.605	MGP_CAROLIEiJ_G0030451	Eif3c	100	96.605	Mus_caroli
ENSCSAG00000006297	-	100	96.605	ENSMUSG00000030738	Eif3c	100	96.605	Mus_musculus
ENSCSAG00000006297	-	100	96.166	MGP_PahariEiJ_G0013661	Eif3c	100	96.166	Mus_pahari
ENSCSAG00000006297	-	100	96.605	MGP_SPRETEiJ_G0031565	Eif3c	100	96.605	Mus_spretus
ENSCSAG00000006297	-	96	97.841	ENSMPUG00000012732	-	100	97.841	Mustela_putorius_furo
ENSCSAG00000006297	-	100	96.933	ENSMLUG00000015558	-	100	96.933	Myotis_lucifugus
ENSCSAG00000006297	-	100	97.590	ENSNGAG00000007177	-	100	97.590	Nannospalax_galili
ENSCSAG00000006297	-	93	87.273	ENSNGAG00000010901	-	98	87.273	Nannospalax_galili
ENSCSAG00000006297	-	100	83.819	ENSNLEG00000001425	-	91	93.333	Nomascus_leucogenys
ENSCSAG00000006297	-	89	63.924	ENSMEUG00000005317	-	100	61.392	Notamacropus_eugenii
ENSCSAG00000006297	-	100	77.814	ENSMEUG00000009939	-	99	77.838	Notamacropus_eugenii
ENSCSAG00000006297	-	100	97.919	ENSOPRG00000000931	-	100	97.919	Ochotona_princeps
ENSCSAG00000006297	-	100	97.700	ENSODEG00000013508	-	100	97.700	Octodon_degus
ENSCSAG00000006297	-	66	63.201	ENSONIG00000011434	eif3c	99	63.201	Oreochromis_niloticus
ENSCSAG00000006297	-	100	91.164	ENSOANG00000011410	-	100	91.164	Ornithorhynchus_anatinus
ENSCSAG00000006297	-	100	98.467	ENSOCUG00000022489	-	100	98.467	Oryctolagus_cuniculus
ENSCSAG00000006297	-	99	75.166	ENSORLG00000006318	eif3c	98	72.148	Oryzias_latipes
ENSCSAG00000006297	-	93	82.283	ENSORLG00020015713	eif3c	96	82.881	Oryzias_latipes_hni
ENSCSAG00000006297	-	99	75.277	ENSORLG00015013772	eif3c	97	74.614	Oryzias_latipes_hsok
ENSCSAG00000006297	-	100	74.544	ENSOMEG00000020450	eif3c	100	74.329	Oryzias_melastigma
ENSCSAG00000006297	-	100	98.248	ENSOGAG00000012737	-	100	98.248	Otolemur_garnettii
ENSCSAG00000006297	-	100	97.809	ENSOARG00000002892	-	100	97.809	Ovis_aries
ENSCSAG00000006297	-	100	98.357	ENSPPRG00000012336	-	100	98.357	Panthera_pardus
ENSCSAG00000006297	-	100	98.357	ENSPTIG00000011712	-	100	98.357	Panthera_tigris_altaica
ENSCSAG00000006297	-	100	100.000	ENSPANG00000021151	-	100	100.000	Papio_anubis
ENSCSAG00000006297	-	100	75.670	ENSPKIG00000002049	eif3c	100	76.313	Paramormyrops_kingsleyae
ENSCSAG00000006297	-	89	84.743	ENSPMGG00000005409	eif3c	94	84.743	Periophthalmus_magnuspinnatus
ENSCSAG00000006297	-	100	95.400	ENSPEMG00000010899	Eif3c	100	95.400	Peromyscus_maniculatus_bairdii
ENSCSAG00000006297	-	100	94.967	ENSPCIG00000025206	-	100	94.967	Phascolarctos_cinereus
ENSCSAG00000006297	-	100	74.707	ENSPFOG00000004476	eif3c	100	74.386	Poecilia_formosa
ENSCSAG00000006297	-	100	71.554	ENSPLAG00000017480	eif3c	100	74.365	Poecilia_latipinna
ENSCSAG00000006297	-	100	74.893	ENSPMEG00000019512	eif3c	100	74.466	Poecilia_mexicana
ENSCSAG00000006297	-	100	96.386	ENSPPYG00000007227	-	100	96.495	Pongo_abelii
ENSCSAG00000006297	-	66	98.336	ENSPCAG00000012710	-	100	98.336	Procavia_capensis
ENSCSAG00000006297	-	100	98.795	ENSPCOG00000019289	-	100	98.795	Propithecus_coquereli
ENSCSAG00000006297	-	100	98.028	ENSPVAG00000005804	-	100	98.028	Pteropus_vampyrus
ENSCSAG00000006297	-	65	69.079	ENSPNYG00000016530	eif3c	81	81.818	Pundamilia_nyererei
ENSCSAG00000006297	-	100	75.970	ENSPNAG00000024040	eif3c	100	76.211	Pygocentrus_nattereri
ENSCSAG00000006297	-	100	96.057	ENSRNOG00000018761	Eif3c	100	96.057	Rattus_norvegicus
ENSCSAG00000006297	-	97	99.887	ENSRBIG00000044009	-	98	97.433	Rhinopithecus_bieti
ENSCSAG00000006297	-	100	100.000	ENSRROG00000043626	-	100	100.000	Rhinopithecus_roxellana
ENSCSAG00000006297	-	77	31.365	YMR309C	-	81	30.699	Saccharomyces_cerevisiae
ENSCSAG00000006297	-	100	99.452	ENSSBOG00000032155	-	100	99.452	Saimiri_boliviensis_boliviensis
ENSCSAG00000006297	-	96	94.564	ENSSHAG00000011808	-	100	94.564	Sarcophilus_harrisii
ENSCSAG00000006297	-	99	76.009	ENSSFOG00015021823	eif3c	98	76.368	Scleropages_formosus
ENSCSAG00000006297	-	97	77.079	ENSSMAG00000016638	eif3c	97	77.069	Scophthalmus_maximus
ENSCSAG00000006297	-	97	79.502	ENSSDUG00000023117	eif3c	98	76.528	Seriola_dumerili
ENSCSAG00000006297	-	99	75.761	ENSSLDG00000009706	eif3c	93	83.660	Seriola_lalandi_dorsalis
ENSCSAG00000006297	-	100	83.716	ENSSPUG00000016470	-	100	84.590	Sphenodon_punctatus
ENSCSAG00000006297	-	100	75.974	ENSSPAG00000000426	eif3c	100	76.413	Stegastes_partitus
ENSCSAG00000006297	-	100	98.576	ENSSSCG00000034927	-	100	98.576	Sus_scrofa
ENSCSAG00000006297	-	99	74.277	ENSTRUG00000008951	eif3c	99	74.920	Takifugu_rubripes
ENSCSAG00000006297	-	100	74.130	ENSTNIG00000015210	eif3c	100	74.891	Tetraodon_nigroviridis
ENSCSAG00000006297	-	100	98.138	ENSTTRG00000005880	-	100	98.138	Tursiops_truncatus
ENSCSAG00000006297	-	72	98.626	ENSUAMG00000001127	-	91	100.000	Ursus_americanus
ENSCSAG00000006297	-	100	98.467	ENSUMAG00000010927	-	100	98.467	Ursus_maritimus
ENSCSAG00000006297	-	100	97.043	ENSVVUG00000025970	-	100	97.043	Vulpes_vulpes
ENSCSAG00000006297	-	100	78.294	ENSXETG00000002941	eif3c	100	78.964	Xenopus_tropicalis
ENSCSAG00000006297	-	100	75.702	ENSXMAG00000013796	eif3c	100	75.054	Xiphophorus_maculatus