EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000006371 (Gene tree)
Gene ID: 103223335
Gene Symbol: APOBEC3H
Alias: ARP10
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3H
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 7205 bases
Position: chr19:21742084-21749288
Accession: 103223335
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000002661	APOBEC_N	PF08210.11	8.5e-36	1	1
ENSCSAP00000002661	APOBEC_C	PF05240.14	2.5e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000004413	APOBEC3H-201	1221	-	ENSCSAP00000002661	211 (aa)	XP_007974009	A0A0D9R222

Gene Model

Click here to download ENSCSAG00000006371's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000006371's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000006371	APOBEC3H	86	35.789	ENSCSAG00000006402	APOBEC3C	96	35.789
ENSCSAG00000006371	APOBEC3H	86	34.872	ENSCSAG00000006445	-	75	34.872
ENSCSAG00000006371	APOBEC3H	61	35.417	ENSCSAG00000018401	-	67	35.417
ENSCSAG00000006371	APOBEC3H	76	36.810	ENSCSAG00000006376	APOBEC3G	79	36.810
ENSCSAG00000006371	APOBEC3H	93	33.831	ENSCSAG00000009663	AICDA	99	33.831
ENSCSAG00000006371	APOBEC3H	78	34.118	ENSCSAG00000006382	APOBEC3F	89	34.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000006371	APOBEC3H	87	80.874	ENSG00000100298	APOBEC3H	100	80.874	Homo_sapiens
ENSCSAG00000006371	APOBEC3H	94	49.261	ENSAMEG00000010818	-	80	49.261	Ailuropoda_melanoleuca
ENSCSAG00000006371	APOBEC3H	94	71.287	ENSANAG00000025410	APOBEC3H	96	70.233	Aotus_nancymaae
ENSCSAG00000006371	APOBEC3H	97	52.222	ENSBTAG00000007755	APOBEC3H	94	52.222	Bos_taurus
ENSCSAG00000006371	APOBEC3H	86	69.613	ENSCJAG00000012524	APOBEC3H	90	69.613	Callithrix_jacchus
ENSCSAG00000006371	APOBEC3H	94	49.495	ENSCAFG00000001361	APOBEC3Z3	100	49.495	Canis_familiaris
ENSCSAG00000006371	APOBEC3H	95	47.500	ENSCAFG00020002584	-	94	49.730	Canis_lupus_dingo
ENSCSAG00000006371	APOBEC3H	94	49.730	ENSCHIG00000026580	-	98	49.730	Capra_hircus
ENSCSAG00000006371	APOBEC3H	84	52.247	ENSTSYG00000032894	-	100	52.247	Carlito_syrichta
ENSCSAG00000006371	APOBEC3H	96	54.229	ENSCPOG00000009257	-	91	54.229	Cavia_porcellus
ENSCSAG00000006371	APOBEC3H	94	70.647	ENSCCAG00000008525	APOBEC3H	100	70.093	Cebus_capucinus
ENSCSAG00000006371	APOBEC3H	86	91.160	ENSCATG00000030302	APOBEC3H	100	91.160	Cercocebus_atys
ENSCSAG00000006371	APOBEC3H	95	54.000	ENSCLAG00000016615	-	98	54.000	Chinchilla_lanigera
ENSCSAG00000006371	APOBEC3H	95	53.431	ENSCGRG00001022976	Apobec3	87	53.431	Cricetulus_griseus_chok1gshd
ENSCSAG00000006371	APOBEC3H	95	53.431	ENSCGRG00000005621	Apobec3	87	53.431	Cricetulus_griseus_crigri
ENSCSAG00000006371	APOBEC3H	85	52.973	ENSDORG00000027271	-	91	52.973	Dipodomys_ordii
ENSCSAG00000006371	APOBEC3H	94	49.500	ENSECAG00000007726	APOBEC3H	85	49.500	Equus_caballus
ENSCSAG00000006371	APOBEC3H	94	52.764	ENSFCAG00000005251	APOBEC3Z3	99	52.020	Felis_catus
ENSCSAG00000006371	APOBEC3H	98	50.725	ENSSTOG00000007125	-	91	50.725	Ictidomys_tridecemlineatus
ENSCSAG00000006371	APOBEC3H	83	51.471	ENSJJAG00000016840	-	82	51.471	Jaculus_jaculus
ENSCSAG00000006371	APOBEC3H	94	53.371	ENSLAFG00000027404	-	96	53.371	Loxodonta_africana
ENSCSAG00000006371	APOBEC3H	100	93.365	ENSMFAG00000031827	APOBEC3H	100	93.365	Macaca_fascicularis
ENSCSAG00000006371	APOBEC3H	100	92.891	ENSMMUG00000001016	APOBEC3H	100	92.891	Macaca_mulatta
ENSCSAG00000006371	APOBEC3H	100	92.891	ENSMNEG00000039259	APOBEC3H	100	92.891	Macaca_nemestrina
ENSCSAG00000006371	APOBEC3H	100	91.943	ENSMLEG00000033417	APOBEC3H	100	91.943	Mandrillus_leucophaeus
ENSCSAG00000006371	APOBEC3H	95	51.961	ENSMAUG00000011683	Apobec3	88	51.961	Mesocricetus_auratus
ENSCSAG00000006371	APOBEC3H	94	51.759	ENSMOCG00000021576	Apobec3	84	52.261	Microtus_ochrogaster
ENSCSAG00000006371	APOBEC3H	95	47.115	MGP_CAROLIEiJ_G0020029	Apobec3	99	47.115	Mus_caroli
ENSCSAG00000006371	APOBEC3H	95	46.040	ENSMUSG00000009585	Apobec3	99	46.040	Mus_musculus
ENSCSAG00000006371	APOBEC3H	95	48.293	MGP_PahariEiJ_G0020031	-	88	48.293	Mus_pahari
ENSCSAG00000006371	APOBEC3H	94	46.000	MGP_SPRETEiJ_G0020927	Apobec3	92	47.027	Mus_spretus
ENSCSAG00000006371	APOBEC3H	94	49.495	ENSMPUG00000013239	-	89	49.495	Mustela_putorius_furo
ENSCSAG00000006371	APOBEC3H	96	46.500	ENSNGAG00000018998	Apobec3	97	46.500	Nannospalax_galili
ENSCSAG00000006371	APOBEC3H	100	83.412	ENSNLEG00000015218	-	100	83.412	Nomascus_leucogenys
ENSCSAG00000006371	APOBEC3H	89	42.021	ENSOCUG00000023913	-	89	42.021	Oryctolagus_cuniculus
ENSCSAG00000006371	APOBEC3H	94	50.000	ENSOARG00000016290	APOBEC3F	97	50.000	Ovis_aries
ENSCSAG00000006371	APOBEC3H	87	79.781	ENSPPAG00000036522	APOBEC3H	100	79.781	Pan_paniscus
ENSCSAG00000006371	APOBEC3H	94	52.261	ENSPPRG00000003941	-	99	52.261	Panthera_pardus
ENSCSAG00000006371	APOBEC3H	72	39.241	ENSPPRG00000003675	-	81	39.241	Panthera_pardus
ENSCSAG00000006371	APOBEC3H	94	52.261	ENSPTIG00000010283	-	99	52.261	Panthera_tigris_altaica
ENSCSAG00000006371	APOBEC3H	87	79.781	ENSPTRG00000014390	APOBEC3H	100	79.781	Pan_troglodytes
ENSCSAG00000006371	APOBEC3H	100	91.943	ENSPANG00000010774	APOBEC3H	100	91.943	Papio_anubis
ENSCSAG00000006371	APOBEC3H	95	47.549	ENSPEMG00000000456	Apobec3	82	47.549	Peromyscus_maniculatus_bairdii
ENSCSAG00000006371	APOBEC3H	95	85.075	ENSPPYG00000011834	-	100	83.412	Pongo_abelii
ENSCSAG00000006371	APOBEC3H	85	42.778	ENSPCAG00000015655	-	99	42.778	Procavia_capensis
ENSCSAG00000006371	APOBEC3H	60	39.370	ENSPVAG00000024161	-	93	39.370	Pteropus_vampyrus
ENSCSAG00000006371	APOBEC3H	60	38.583	ENSPVAG00000024267	-	93	38.583	Pteropus_vampyrus
ENSCSAG00000006371	APOBEC3H	84	51.685	ENSPVAG00000009462	-	98	51.685	Pteropus_vampyrus
ENSCSAG00000006371	APOBEC3H	87	51.596	ENSRNOG00000016852	Apobec3	86	51.596	Rattus_norvegicus
ENSCSAG00000006371	APOBEC3H	100	88.626	ENSRBIG00000029088	APOBEC3H	100	88.626	Rhinopithecus_bieti
ENSCSAG00000006371	APOBEC3H	100	88.152	ENSRROG00000024699	APOBEC3H	100	88.152	Rhinopithecus_roxellana
ENSCSAG00000006371	APOBEC3H	99	65.094	ENSSBOG00000030005	APOBEC3H	100	71.038	Saimiri_boliviensis_boliviensis
ENSCSAG00000006371	APOBEC3H	94	54.348	ENSSSCG00000000091	APOBEC3B	92	52.607	Sus_scrofa
ENSCSAG00000006371	APOBEC3H	82	53.488	ENSTBEG00000001532	-	98	53.488	Tupaia_belangeri
ENSCSAG00000006371	APOBEC3H	85	52.222	ENSTTRG00000001266	-	99	52.222	Tursiops_truncatus
ENSCSAG00000006371	APOBEC3H	85	51.872	ENSUAMG00000004427	-	83	51.872	Ursus_americanus
ENSCSAG00000006371	APOBEC3H	94	54.040	ENSUMAG00000014435	-	99	54.040	Ursus_maritimus
ENSCSAG00000006371	APOBEC3H	62	53.846	ENSVPAG00000011108	-	98	53.846	Vicugna_pacos
ENSCSAG00000006371	APOBEC3H	98	51.471	ENSVVUG00000014624	-	66	51.471	Vulpes_vulpes