EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000006445 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 10834 bases
Position: chr19:21625056-21635889
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000002728	APOBEC_N	PF08210.11	9.6e-100	1	2
ENSCSAP00000002728	APOBEC_N	PF08210.11	9.6e-100	2	2
ENSCSAP00000002728	APOBEC_C	PF05240.14	6.6e-62	1	2
ENSCSAP00000002728	APOBEC_C	PF05240.14	6.6e-62	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000004480	-	1875	-	ENSCSAP00000002728	490 (aa)	-	A0A0D9R289

Gene Model

Click here to download ENSCSAG00000006445's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000006445's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000006445	-	74	30.270	ENSCSAG00000011177	APOBEC2	88	30.622
ENSCSAG00000006445	-	75	44.149	ENSCSAG00000009663	AICDA	96	44.149
ENSCSAG00000006445	-	76	51.989	ENSCSAG00000006376	APOBEC3G	89	51.989
ENSCSAG00000006445	-	58	82.993	ENSCSAG00000018401	-	70	82.993
ENSCSAG00000006445	-	75	34.872	ENSCSAG00000006371	APOBEC3H	86	34.872
ENSCSAG00000006445	-	77	60.471	ENSCSAG00000006382	APOBEC3F	100	60.471
ENSCSAG00000006445	-	77	48.947	ENSCSAG00000006402	APOBEC3C	100	48.947

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000006445	-	100	85.102	ENSG00000179750	APOBEC3B	100	85.102	Homo_sapiens
ENSCSAG00000006445	-	76	79.365	ENSG00000128383	APOBEC3A	95	79.365	Homo_sapiens
ENSCSAG00000006445	-	78	53.158	ENSCJAG00000012500	-	98	54.945	Callithrix_jacchus
ENSCSAG00000006445	-	77	59.259	ENSTSYG00000035593	-	97	59.259	Carlito_syrichta
ENSCSAG00000006445	-	77	61.257	ENSCCAG00000027450	-	99	61.257	Cebus_capucinus
ENSCSAG00000006445	-	100	91.837	ENSCATG00000013527	-	100	91.837	Cercocebus_atys
ENSCSAG00000006445	-	77	86.316	ENSCANG00000030513	-	97	86.316	Colobus_angolensis_palliatus
ENSCSAG00000006445	-	77	82.540	ENSGGOG00000006721	APOBEC3B	99	82.540	Gorilla_gorilla
ENSCSAG00000006445	-	99	84.718	ENSMFAG00000008980	APOBEC3A	99	86.082	Macaca_fascicularis
ENSCSAG00000006445	-	100	86.327	ENSMMUG00000004015	-	99	88.542	Macaca_mulatta
ENSCSAG00000006445	-	77	82.383	ENSMMUG00000042504	APOBEC3A	97	84.043	Macaca_mulatta
ENSCSAG00000006445	-	77	87.879	ENSMNEG00000043211	-	95	87.879	Macaca_nemestrina
ENSCSAG00000006445	-	77	91.534	ENSMLEG00000004809	-	99	91.534	Mandrillus_leucophaeus
ENSCSAG00000006445	-	99	82.164	ENSNLEG00000015215	-	99	81.563	Nomascus_leucogenys
ENSCSAG00000006445	-	100	86.735	ENSPPAG00000009288	APOBEC3B	100	86.735	Pan_paniscus
ENSCSAG00000006445	-	100	80.408	ENSPTRG00000014384	APOBEC3B	100	80.408	Pan_troglodytes
ENSCSAG00000006445	-	100	80.408	ENSPANG00000006941	APOBEC3B	100	80.816	Papio_anubis
ENSCSAG00000006445	-	78	85.411	ENSPPYG00000011831	-	99	85.411	Pongo_abelii
ENSCSAG00000006445	-	59	58.784	ENSPCOG00000017606	-	95	58.784	Propithecus_coquereli
ENSCSAG00000006445	-	77	91.005	ENSRBIG00000042829	-	99	91.005	Rhinopithecus_bieti
ENSCSAG00000006445	-	77	91.005	ENSRROG00000028773	APOBEC3G	99	91.005	Rhinopithecus_roxellana