EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000006561 (Gene tree)
Gene ID: 103229876
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 99913 bases
Position: chr5:22453931-22553843
Accession: 103229876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000002846	Ago_hook	PF10427.9	2.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000004599	TNRC6A-201	8440	XM_007988110	ENSCSAP00000002846	1960 (aa)	XP_007986301	A0A0D9R2K7

Gene Model

Click here to download ENSCSAG00000006561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000006561's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000006561	TNRC6A	97	43.060	ENSCSAG00000005167	TNRC6C	99	43.137
ENSCSAG00000006561	TNRC6A	97	34.719	ENSCSAG00000006021	TNRC6B	99	34.893

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000006561	TNRC6A	100	99.185	ENSG00000090905	TNRC6A	100	99.185	Homo_sapiens
ENSCSAG00000006561	TNRC6A	98	96.559	ENSAMEG00000009333	TNRC6A	100	96.559	Ailuropoda_melanoleuca
ENSCSAG00000006561	TNRC6A	97	81.908	ENSAPLG00000009978	TNRC6A	100	81.908	Anas_platyrhynchos
ENSCSAG00000006561	TNRC6A	100	54.664	ENSACAG00000011857	TNRC6A	100	56.649	Anolis_carolinensis
ENSCSAG00000006561	TNRC6A	100	98.980	ENSANAG00000025252	TNRC6A	100	98.980	Aotus_nancymaae
ENSCSAG00000006561	TNRC6A	91	56.311	ENSAMXG00000019919	tnrc6a	99	55.892	Astyanax_mexicanus
ENSCSAG00000006561	TNRC6A	100	93.112	ENSBTAG00000017999	TNRC6A	99	95.593	Bos_taurus
ENSCSAG00000006561	TNRC6A	100	98.730	ENSCJAG00000020677	TNRC6A	100	98.730	Callithrix_jacchus
ENSCSAG00000006561	TNRC6A	99	96.682	ENSCAFG00000017531	TNRC6A	100	96.682	Canis_familiaris
ENSCSAG00000006561	TNRC6A	98	94.898	ENSCAFG00020021160	TNRC6A	99	95.388	Canis_lupus_dingo
ENSCSAG00000006561	TNRC6A	100	92.704	ENSCHIG00000019448	TNRC6A	100	92.525	Capra_hircus
ENSCSAG00000006561	TNRC6A	100	96.888	ENSTSYG00000012711	TNRC6A	100	96.888	Carlito_syrichta
ENSCSAG00000006561	TNRC6A	99	93.463	ENSCPOG00000036684	TNRC6A	100	93.463	Cavia_porcellus
ENSCSAG00000006561	TNRC6A	100	99.184	ENSCCAG00000033664	TNRC6A	100	99.184	Cebus_capucinus
ENSCSAG00000006561	TNRC6A	99	96.721	ENSCATG00000019284	TNRC6A	98	97.678	Cercocebus_atys
ENSCSAG00000006561	TNRC6A	100	89.439	ENSCLAG00000010217	TNRC6A	100	89.490	Chinchilla_lanigera
ENSCSAG00000006561	TNRC6A	95	91.763	ENSCHOG00000009374	TNRC6A	95	91.763	Choloepus_hoffmanni
ENSCSAG00000006561	TNRC6A	91	80.011	ENSCPBG00000001881	TNRC6A	99	80.067	Chrysemys_picta_bellii
ENSCSAG00000006561	TNRC6A	100	99.439	ENSCANG00000041549	TNRC6A	100	99.439	Colobus_angolensis_palliatus
ENSCSAG00000006561	TNRC6A	98	94.828	ENSCGRG00001015021	Tnrc6a	99	94.720	Cricetulus_griseus_chok1gshd
ENSCSAG00000006561	TNRC6A	99	91.373	ENSCGRG00000013351	Tnrc6a	99	91.220	Cricetulus_griseus_crigri
ENSCSAG00000006561	TNRC6A	91	56.420	ENSDARG00000079688	tnrc6a	99	56.451	Danio_rerio
ENSCSAG00000006561	TNRC6A	98	93.845	ENSDNOG00000013989	TNRC6A	99	93.845	Dasypus_novemcinctus
ENSCSAG00000006561	TNRC6A	98	85.513	ENSETEG00000014658	TNRC6A	99	85.460	Echinops_telfairi
ENSCSAG00000006561	TNRC6A	100	96.583	ENSEASG00005017693	TNRC6A	100	97.001	Equus_asinus_asinus
ENSCSAG00000006561	TNRC6A	100	96.583	ENSECAG00000025056	TNRC6A	100	97.001	Equus_caballus
ENSCSAG00000006561	TNRC6A	98	89.817	ENSEEUG00000004530	TNRC6A	99	89.869	Erinaceus_europaeus
ENSCSAG00000006561	TNRC6A	100	95.665	ENSFCAG00000025236	TNRC6A	100	95.665	Felis_catus
ENSCSAG00000006561	TNRC6A	99	78.863	ENSFALG00000003757	TNRC6A	99	79.859	Ficedula_albicollis
ENSCSAG00000006561	TNRC6A	91	80.381	ENSGALG00000006068	TNRC6A	99	80.493	Gallus_gallus
ENSCSAG00000006561	TNRC6A	91	79.530	ENSGAGG00000023209	TNRC6A	99	79.586	Gopherus_agassizii
ENSCSAG00000006561	TNRC6A	99	98.869	ENSGGOG00000005137	TNRC6A	99	98.869	Gorilla_gorilla
ENSCSAG00000006561	TNRC6A	100	70.576	ENSHGLG00000007368	-	99	70.219	Heterocephalus_glaber_female
ENSCSAG00000006561	TNRC6A	99	91.914	ENSHGLG00000012474	-	100	91.709	Heterocephalus_glaber_female
ENSCSAG00000006561	TNRC6A	99	91.249	ENSHGLG00100012496	-	100	91.249	Heterocephalus_glaber_male
ENSCSAG00000006561	TNRC6A	99	96.285	ENSSTOG00000023394	TNRC6A	99	96.285	Ictidomys_tridecemlineatus
ENSCSAG00000006561	TNRC6A	97	69.659	ENSLACG00000006277	TNRC6A	100	70.330	Latimeria_chalumnae
ENSCSAG00000006561	TNRC6A	99	83.223	ENSLOCG00000005517	tnrc6a	93	83.223	Lepisosteus_oculatus
ENSCSAG00000006561	TNRC6A	98	92.111	ENSLAFG00000004209	TNRC6A	99	92.211	Loxodonta_africana
ENSCSAG00000006561	TNRC6A	97	98.023	ENSMFAG00000003824	TNRC6A	99	98.023	Macaca_fascicularis
ENSCSAG00000006561	TNRC6A	100	99.337	ENSMMUG00000020428	TNRC6A	100	99.337	Macaca_mulatta
ENSCSAG00000006561	TNRC6A	100	99.187	ENSMNEG00000034854	TNRC6A	100	99.187	Macaca_nemestrina
ENSCSAG00000006561	TNRC6A	100	95.610	ENSMLEG00000042737	TNRC6A	99	95.610	Mandrillus_leucophaeus
ENSCSAG00000006561	TNRC6A	99	79.929	ENSMGAG00000006455	TNRC6A	99	80.485	Meleagris_gallopavo
ENSCSAG00000006561	TNRC6A	100	92.045	ENSMAUG00000012750	Tnrc6a	100	91.790	Mesocricetus_auratus
ENSCSAG00000006561	TNRC6A	100	97.910	ENSMICG00000030685	TNRC6A	100	97.910	Microcebus_murinus
ENSCSAG00000006561	TNRC6A	100	92.653	ENSMOCG00000000152	Tnrc6a	100	92.449	Microtus_ochrogaster
ENSCSAG00000006561	TNRC6A	99	80.794	ENSMODG00000016348	TNRC6A	99	81.935	Monodelphis_domestica
ENSCSAG00000006561	TNRC6A	99	90.890	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	94.711	Mus_caroli
ENSCSAG00000006561	TNRC6A	100	91.531	ENSMUSG00000052707	Tnrc6a	99	95.068	Mus_musculus
ENSCSAG00000006561	TNRC6A	99	91.667	MGP_PahariEiJ_G0013635	Tnrc6a	100	95.354	Mus_pahari
ENSCSAG00000006561	TNRC6A	100	93.980	MGP_SPRETEiJ_G0031539	Tnrc6a	100	95.068	Mus_spretus
ENSCSAG00000006561	TNRC6A	97	82.313	ENSMPUG00000012324	TNRC6A	100	82.104	Mustela_putorius_furo
ENSCSAG00000006561	TNRC6A	97	92.865	ENSMLUG00000002701	TNRC6A	100	92.812	Myotis_lucifugus
ENSCSAG00000006561	TNRC6A	99	93.160	ENSNGAG00000020702	Tnrc6a	100	93.160	Nannospalax_galili
ENSCSAG00000006561	TNRC6A	98	96.037	ENSNLEG00000011851	TNRC6A	99	96.037	Nomascus_leucogenys
ENSCSAG00000006561	TNRC6A	77	89.258	ENSMEUG00000015959	-	77	89.258	Notamacropus_eugenii
ENSCSAG00000006561	TNRC6A	96	99.627	ENSOPRG00000005819	TNRC6A	96	99.627	Ochotona_princeps
ENSCSAG00000006561	TNRC6A	99	87.545	ENSODEG00000012802	TNRC6A	99	87.339	Octodon_degus
ENSCSAG00000006561	TNRC6A	87	83.314	ENSOANG00000007672	TNRC6A	99	83.314	Ornithorhynchus_anatinus
ENSCSAG00000006561	TNRC6A	97	93.183	ENSOCUG00000004325	TNRC6A	100	93.131	Oryctolagus_cuniculus
ENSCSAG00000006561	TNRC6A	99	97.172	ENSOGAG00000006666	TNRC6A	100	97.172	Otolemur_garnettii
ENSCSAG00000006561	TNRC6A	99	94.359	ENSOARG00000017950	TNRC6A	100	93.949	Ovis_aries
ENSCSAG00000006561	TNRC6A	99	98.830	ENSPPAG00000028379	TNRC6A	100	98.830	Pan_paniscus
ENSCSAG00000006561	TNRC6A	100	95.665	ENSPPRG00000005861	TNRC6A	100	95.665	Panthera_pardus
ENSCSAG00000006561	TNRC6A	99	94.697	ENSPTIG00000006346	TNRC6A	99	94.697	Panthera_tigris_altaica
ENSCSAG00000006561	TNRC6A	99	97.187	ENSPTRG00000007898	TNRC6A	99	97.187	Pan_troglodytes
ENSCSAG00000006561	TNRC6A	100	97.099	ENSPANG00000018523	TNRC6A	100	97.099	Papio_anubis
ENSCSAG00000006561	TNRC6A	77	75.082	ENSPSIG00000003965	TNRC6A	100	75.147	Pelodiscus_sinensis
ENSCSAG00000006561	TNRC6A	100	91.990	ENSPEMG00000016318	Tnrc6a	100	92.186	Peromyscus_maniculatus_bairdii
ENSCSAG00000006561	TNRC6A	97	83.638	ENSPCIG00000012106	TNRC6A	100	83.847	Phascolarctos_cinereus
ENSCSAG00000006561	TNRC6A	99	98.573	ENSPPYG00000007202	TNRC6A	100	98.573	Pongo_abelii
ENSCSAG00000006561	TNRC6A	95	100.000	ENSPCAG00000008260	TNRC6A	94	100.000	Procavia_capensis
ENSCSAG00000006561	TNRC6A	100	95.563	ENSPCOG00000010134	TNRC6A	100	95.563	Propithecus_coquereli
ENSCSAG00000006561	TNRC6A	89	71.036	ENSPVAG00000012066	TNRC6A	99	70.864	Pteropus_vampyrus
ENSCSAG00000006561	TNRC6A	100	91.811	ENSRNOG00000024737	Tnrc6a	98	93.933	Rattus_norvegicus
ENSCSAG00000006561	TNRC6A	99	99.586	ENSRBIG00000014222	TNRC6A	100	99.586	Rhinopithecus_bieti
ENSCSAG00000006561	TNRC6A	100	99.388	ENSRROG00000032360	TNRC6A	100	99.388	Rhinopithecus_roxellana
ENSCSAG00000006561	TNRC6A	98	98.014	ENSSBOG00000036197	TNRC6A	100	99.473	Saimiri_boliviensis_boliviensis
ENSCSAG00000006561	TNRC6A	91	81.707	ENSSHAG00000008811	TNRC6A	99	82.227	Sarcophilus_harrisii
ENSCSAG00000006561	TNRC6A	87	67.365	ENSSFOG00015008920	tnrc6a	99	63.910	Scleropages_formosus
ENSCSAG00000006561	TNRC6A	72	83.877	ENSSARG00000002479	TNRC6A	89	83.152	Sorex_araneus
ENSCSAG00000006561	TNRC6A	90	78.835	ENSSPUG00000010525	TNRC6A	100	78.835	Sphenodon_punctatus
ENSCSAG00000006561	TNRC6A	100	93.791	ENSSSCG00000038870	TNRC6A	100	97.776	Sus_scrofa
ENSCSAG00000006561	TNRC6A	99	77.563	ENSTGUG00000006142	TNRC6A	100	78.173	Taeniopygia_guttata
ENSCSAG00000006561	TNRC6A	98	94.566	ENSTBEG00000014965	TNRC6A	100	94.566	Tupaia_belangeri
ENSCSAG00000006561	TNRC6A	94	98.058	ENSTTRG00000002008	TNRC6A	93	98.058	Tursiops_truncatus
ENSCSAG00000006561	TNRC6A	79	92.471	ENSUAMG00000006656	-	93	92.407	Ursus_americanus
ENSCSAG00000006561	TNRC6A	98	95.381	ENSUMAG00000008274	TNRC6A	99	96.275	Ursus_maritimus
ENSCSAG00000006561	TNRC6A	57	85.493	ENSVPAG00000010764	-	57	85.493	Vicugna_pacos
ENSCSAG00000006561	TNRC6A	99	96.706	ENSVVUG00000005380	TNRC6A	100	96.689	Vulpes_vulpes
ENSCSAG00000006561	TNRC6A	94	65.705	ENSXETG00000030437	TNRC6A	99	66.235	Xenopus_tropicalis