EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000006660 (Gene tree)
Gene ID: -
Gene Symbol: NCL
Alias: C23|Nsr1
Full Name: nucleolin
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 8871 bases
Position: chr10:117477904-117486774
Accession: 7667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000002943	RRM_1	PF00076.22	1.9e-59	1	4
ENSCSAP00000002943	RRM_1	PF00076.22	1.9e-59	2	4
ENSCSAP00000002943	RRM_1	PF00076.22	1.9e-59	3	4
ENSCSAP00000002943	RRM_1	PF00076.22	1.9e-59	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000004698	NCL-201	3027	-	ENSCSAP00000002943	463 (aa)	-	A0A0D9R2V4

Gene Model

Click here to download ENSCSAG00000006660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000006660's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000006660	NCL	74	33.333	ENSCSAG00000012017	PABPC1	58	33.333
ENSCSAG00000006660	NCL	55	31.638	ENSCSAG00000015135	TIA1	72	31.638
ENSCSAG00000006660	NCL	64	31.548	ENSCSAG00000004734	TIAL1	72	31.548

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000006660	NCL	95	99.773	ENSG00000115053	NCL	100	91.554	Homo_sapiens
ENSCSAG00000006660	NCL	95	97.273	ENSAMEG00000016289	NCL	61	97.273	Ailuropoda_melanoleuca
ENSCSAG00000006660	NCL	95	99.318	ENSANAG00000035814	-	62	99.318	Aotus_nancymaae
ENSCSAG00000006660	NCL	95	81.549	ENSANAG00000024378	-	75	82.586	Aotus_nancymaae
ENSCSAG00000006660	NCL	95	97.273	ENSBTAG00000016174	NCL	63	96.136	Bos_taurus
ENSCSAG00000006660	NCL	67	91.213	ENSBTAG00000026909	-	53	91.213	Bos_taurus
ENSCSAG00000006660	NCL	66	87.829	ENSBTAG00000050728	-	51	88.710	Bos_taurus
ENSCSAG00000006660	NCL	95	99.318	ENSCJAG00000013538	NCL	62	99.318	Callithrix_jacchus
ENSCSAG00000006660	NCL	95	97.273	ENSCAFG00000011037	NCL	62	97.273	Canis_familiaris
ENSCSAG00000006660	NCL	95	97.727	ENSCAFG00020023145	NCL	65	97.727	Canis_lupus_dingo
ENSCSAG00000006660	NCL	95	79.043	ENSCHIG00000012143	-	61	81.316	Capra_hircus
ENSCSAG00000006660	NCL	95	97.045	ENSCHIG00000010894	-	66	97.045	Capra_hircus
ENSCSAG00000006660	NCL	95	85.649	ENSCHIG00000026149	-	54	89.474	Capra_hircus
ENSCSAG00000006660	NCL	95	93.622	ENSCHIG00000021052	-	70	93.636	Capra_hircus
ENSCSAG00000006660	NCL	79	86.885	ENSTSYG00000036886	-	61	85.185	Carlito_syrichta
ENSCSAG00000006660	NCL	87	96.990	ENSTSYG00000029779	-	50	96.990	Carlito_syrichta
ENSCSAG00000006660	NCL	95	97.500	ENSTSYG00000004355	-	61	97.500	Carlito_syrichta
ENSCSAG00000006660	NCL	95	90.205	ENSCAPG00000009405	NCL	52	88.684	Cavia_aperea
ENSCSAG00000006660	NCL	95	94.761	ENSCPOG00000001034	NCL	53	93.947	Cavia_porcellus
ENSCSAG00000006660	NCL	73	88.945	ENSCCAG00000000551	-	51	89.055	Cebus_capucinus
ENSCSAG00000006660	NCL	95	98.866	ENSCCAG00000021040	-	62	98.866	Cebus_capucinus
ENSCSAG00000006660	NCL	95	99.773	ENSCATG00000037033	NCL	62	99.773	Cercocebus_atys
ENSCSAG00000006660	NCL	95	95.444	ENSCLAG00000013080	NCL	53	94.737	Chinchilla_lanigera
ENSCSAG00000006660	NCL	80	80.376	ENSCHOG00000012860	NCL	78	80.475	Choloepus_hoffmanni
ENSCSAG00000006660	NCL	84	94.072	ENSCANG00000036756	NCL	89	94.072	Colobus_angolensis_palliatus
ENSCSAG00000006660	NCL	83	78.646	ENSCGRG00001022350	-	56	78.272	Cricetulus_griseus_chok1gshd
ENSCSAG00000006660	NCL	82	88.918	ENSCGRG00001024315	-	53	88.947	Cricetulus_griseus_chok1gshd
ENSCSAG00000006660	NCL	82	88.918	ENSCGRG00000017894	-	54	88.947	Cricetulus_griseus_crigri
ENSCSAG00000006660	NCL	83	78.646	ENSCGRG00000000507	-	56	78.272	Cricetulus_griseus_crigri
ENSCSAG00000006660	NCL	95	91.837	ENSDNOG00000010783	-	54	93.979	Dasypus_novemcinctus
ENSCSAG00000006660	NCL	95	80.499	ENSDNOG00000046347	-	63	79.864	Dasypus_novemcinctus
ENSCSAG00000006660	NCL	83	84.197	ENSDORG00000012513	-	55	84.238	Dipodomys_ordii
ENSCSAG00000006660	NCL	79	73.569	ENSDORG00000023596	-	53	73.016	Dipodomys_ordii
ENSCSAG00000006660	NCL	82	90.526	ENSETEG00000018937	-	53	90.526	Echinops_telfairi
ENSCSAG00000006660	NCL	81	90.186	ENSETEG00000014756	-	86	90.237	Echinops_telfairi
ENSCSAG00000006660	NCL	80	66.667	ENSETEG00000008139	-	64	66.757	Echinops_telfairi
ENSCSAG00000006660	NCL	95	62.132	ENSETEG00000008553	-	80	65.263	Echinops_telfairi
ENSCSAG00000006660	NCL	97	96.197	ENSEASG00005008488	NCL	70	96.197	Equus_asinus_asinus
ENSCSAG00000006660	NCL	95	97.045	ENSECAG00000021868	NCL	61	97.045	Equus_caballus
ENSCSAG00000006660	NCL	82	91.557	ENSEEUG00000005913	NCL	54	91.579	Erinaceus_europaeus
ENSCSAG00000006660	NCL	95	97.727	ENSFCAG00000027622	NCL	61	97.727	Felis_catus
ENSCSAG00000006660	NCL	95	95.672	ENSFDAG00000014291	NCL	60	95.000	Fukomys_damarensis
ENSCSAG00000006660	NCL	95	99.773	ENSGGOG00000004300	NCL	81	90.455	Gorilla_gorilla
ENSCSAG00000006660	NCL	65	83.636	ENSHGLG00000005133	-	68	74.476	Heterocephalus_glaber_female
ENSCSAG00000006660	NCL	95	84.247	ENSHGLG00000011069	-	56	86.579	Heterocephalus_glaber_female
ENSCSAG00000006660	NCL	95	95.672	ENSHGLG00000002031	-	53	95.000	Heterocephalus_glaber_female
ENSCSAG00000006660	NCL	94	83.295	ENSHGLG00100000745	-	59	85.676	Heterocephalus_glaber_male
ENSCSAG00000006660	NCL	95	95.444	ENSHGLG00100014537	-	54	94.737	Heterocephalus_glaber_male
ENSCSAG00000006660	NCL	95	79.043	ENSJJAG00000016165	Ncl	55	82.398	Jaculus_jaculus
ENSCSAG00000006660	NCL	98	82.276	ENSLAFG00000013061	NCL	59	83.333	Loxodonta_africana
ENSCSAG00000006660	NCL	95	99.773	ENSMFAG00000040385	NCL	62	99.773	Macaca_fascicularis
ENSCSAG00000006660	NCL	95	99.773	ENSMMUG00000018094	NCL	62	99.773	Macaca_mulatta
ENSCSAG00000006660	NCL	95	99.773	ENSMNEG00000023839	NCL	64	99.773	Macaca_nemestrina
ENSCSAG00000006660	NCL	95	99.773	ENSMLEG00000028935	NCL	62	99.773	Mandrillus_leucophaeus
ENSCSAG00000006660	NCL	95	97.500	ENSMICG00000002538	-	62	97.500	Microcebus_murinus
ENSCSAG00000006660	NCL	82	75.789	ENSMICG00000029975	-	56	79.216	Microcebus_murinus
ENSCSAG00000006660	NCL	95	88.155	MGP_CAROLIEiJ_G0014362	Ncl	53	86.579	Mus_caroli
ENSCSAG00000006660	NCL	95	88.155	ENSMUSG00000026234	Ncl	53	86.579	Mus_musculus
ENSCSAG00000006660	NCL	95	88.155	MGP_PahariEiJ_G0027599	Ncl	53	86.579	Mus_pahari
ENSCSAG00000006660	NCL	95	88.155	MGP_SPRETEiJ_G0015164	Ncl	53	86.579	Mus_spretus
ENSCSAG00000006660	NCL	57	97.872	ENSMPUG00000004834	-	83	97.872	Mustela_putorius_furo
ENSCSAG00000006660	NCL	95	97.273	ENSMLUG00000014547	NCL	61	97.273	Myotis_lucifugus
ENSCSAG00000006660	NCL	82	89.974	ENSNGAG00000002454	-	53	90.000	Nannospalax_galili
ENSCSAG00000006660	NCL	82	72.296	ENSNGAG00000006188	-	54	72.368	Nannospalax_galili
ENSCSAG00000006660	NCL	95	85.849	ENSNLEG00000014107	-	60	85.893	Nomascus_leucogenys
ENSCSAG00000006660	NCL	95	90.433	ENSODEG00000003281	-	53	90.765	Octodon_degus
ENSCSAG00000006660	NCL	95	79.499	ENSODEG00000002441	-	59	85.263	Octodon_degus
ENSCSAG00000006660	NCL	95	88.610	ENSODEG00000002748	-	59	90.501	Octodon_degus
ENSCSAG00000006660	NCL	96	94.595	ENSOCUG00000004312	NCL	68	94.595	Oryctolagus_cuniculus
ENSCSAG00000006660	NCL	95	83.144	ENSOGAG00000027852	NCL	63	88.158	Otolemur_garnettii
ENSCSAG00000006660	NCL	81	94.430	ENSOARG00000013710	-	64	94.474	Ovis_aries
ENSCSAG00000006660	NCL	85	77.863	ENSOARG00000004072	-	61	79.737	Ovis_aries
ENSCSAG00000006660	NCL	95	95.034	ENSOARG00000020709	-	65	95.034	Ovis_aries
ENSCSAG00000006660	NCL	95	99.773	ENSPPAG00000011619	NCL	62	99.773	Pan_paniscus
ENSCSAG00000006660	NCL	95	97.500	ENSPPRG00000012603	NCL	62	97.500	Panthera_pardus
ENSCSAG00000006660	NCL	95	97.500	ENSPTIG00000010393	NCL	62	97.500	Panthera_tigris_altaica
ENSCSAG00000006660	NCL	95	99.773	ENSPTRG00000013025	NCL	81	90.455	Pan_troglodytes
ENSCSAG00000006660	NCL	95	99.773	ENSPANG00000010292	NCL	62	99.773	Papio_anubis
ENSCSAG00000006660	NCL	95	89.165	ENSPPYG00000013265	NCL	53	87.760	Pongo_abelii
ENSCSAG00000006660	NCL	95	97.059	ENSPCOG00000003051	-	62	97.059	Propithecus_coquereli
ENSCSAG00000006660	NCL	81	89.600	ENSPCOG00000004160	-	68	89.501	Propithecus_coquereli
ENSCSAG00000006660	NCL	95	97.955	ENSPVAG00000000297	NCL	62	97.955	Pteropus_vampyrus
ENSCSAG00000006660	NCL	95	89.749	ENSRNOG00000018273	Ncl	53	88.421	Rattus_norvegicus
ENSCSAG00000006660	NCL	82	96.997	ENSRBIG00000035396	-	74	96.997	Rhinopithecus_bieti
ENSCSAG00000006660	NCL	95	97.279	ENSRBIG00000037525	-	63	97.279	Rhinopithecus_bieti
ENSCSAG00000006660	NCL	95	98.997	ENSRROG00000036103	-	54	98.802	Rhinopithecus_roxellana
ENSCSAG00000006660	NCL	95	99.546	ENSRROG00000028756	-	62	99.546	Rhinopithecus_roxellana
ENSCSAG00000006660	NCL	95	99.091	ENSSBOG00000029193	-	62	99.091	Saimiri_boliviensis_boliviensis
ENSCSAG00000006660	NCL	95	90.661	ENSSBOG00000027549	-	77	90.682	Saimiri_boliviensis_boliviensis
ENSCSAG00000006660	NCL	95	96.599	ENSSSCG00000016275	NCL	61	96.599	Sus_scrofa
ENSCSAG00000006660	NCL	95	80.455	ENSTBEG00000001546	-	54	84.211	Tupaia_belangeri
ENSCSAG00000006660	NCL	89	77.073	ENSTBEG00000002469	-	51	82.000	Tupaia_belangeri
ENSCSAG00000006660	NCL	82	95.767	ENSTTRG00000009094	NCL	53	95.767	Tursiops_truncatus
ENSCSAG00000006660	NCL	95	97.273	ENSUAMG00000005639	NCL	87	97.273	Ursus_americanus
ENSCSAG00000006660	NCL	95	97.273	ENSUMAG00000015789	NCL	62	97.273	Ursus_maritimus
ENSCSAG00000006660	NCL	95	97.273	ENSVVUG00000025564	NCL	65	97.273	Vulpes_vulpes