EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000006706 (Gene tree)
Gene ID: 103232843
Gene Symbol: DKC1
Alias: Cbf5|DKC|NAP57|NOLA4|XAP101|dyskerin
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 13956 bases
Position: chrX:129016046-129030001
Accession: 103232843
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000002992	TruB_N	PF01509.18	8.9e-22	1	1
ENSCSAP00000002992	PUA	PF01472.20	2.2e-18	1	1
ENSCSAP00000002992	DKCLD	PF08068.12	2.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000004750	DKC1-201	2700	XM_007993180	ENSCSAP00000002992	514 (aa)	XP_007991371	A0A0D9R303

Gene Model

Click here to download ENSCSAG00000006706's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000006706's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000006706	DKC1	100	99.416	ENSG00000130826	DKC1	100	99.416	Homo_sapiens
ENSCSAG00000006706	DKC1	85	81.136	ENSAPOG00000007799	dkc1	91	78.132	Acanthochromis_polyacanthus
ENSCSAG00000006706	DKC1	91	93.562	ENSAMEG00000002776	DKC1	100	91.245	Ailuropoda_melanoleuca
ENSCSAG00000006706	DKC1	86	80.499	ENSACIG00000022614	dkc1	89	82.051	Amphilophus_citrinellus
ENSCSAG00000006706	DKC1	91	77.919	ENSAOCG00000013159	dkc1	93	76.907	Amphiprion_ocellaris
ENSCSAG00000006706	DKC1	91	77.919	ENSAPEG00000002284	dkc1	93	77.944	Amphiprion_percula
ENSCSAG00000006706	DKC1	86	77.902	ENSATEG00000013682	dkc1	85	77.902	Anabas_testudineus
ENSCSAG00000006706	DKC1	86	84.000	ENSACAG00000015600	DKC1	77	84.821	Anolis_carolinensis
ENSCSAG00000006706	DKC1	100	97.082	ENSANAG00000022732	DKC1	100	97.082	Aotus_nancymaae
ENSCSAG00000006706	DKC1	77	86.364	ENSACLG00000015605	dkc1	94	77.391	Astatotilapia_calliptera
ENSCSAG00000006706	DKC1	87	80.580	ENSAMXG00000017108	dkc1	87	79.266	Astyanax_mexicanus
ENSCSAG00000006706	DKC1	100	90.856	ENSBTAG00000013045	DKC1	100	90.856	Bos_taurus
ENSCSAG00000006706	DKC1	80	67.070	WBGene00010478	K01G5.5	98	64.840	Caenorhabditis_elegans
ENSCSAG00000006706	DKC1	100	98.252	ENSCJAG00000004210	DKC1	100	98.252	Callithrix_jacchus
ENSCSAG00000006706	DKC1	96	78.600	ENSCAFG00000009311	-	96	78.800	Canis_familiaris
ENSCSAG00000006706	DKC1	97	89.764	ENSCAFG00000019620	-	97	90.119	Canis_familiaris
ENSCSAG00000006706	DKC1	96	78.427	ENSCAFG00020009379	-	92	78.629	Canis_lupus_dingo
ENSCSAG00000006706	DKC1	97	89.764	ENSCAFG00020008918	-	97	90.119	Canis_lupus_dingo
ENSCSAG00000006706	DKC1	100	90.856	ENSCHIG00000017392	DKC1	100	90.856	Capra_hircus
ENSCSAG00000006706	DKC1	99	93.474	ENSTSYG00000007681	DKC1	99	93.474	Carlito_syrichta
ENSCSAG00000006706	DKC1	85	93.563	ENSCAPG00000003342	DKC1	99	93.563	Cavia_aperea
ENSCSAG00000006706	DKC1	97	93.964	ENSCPOG00000008825	DKC1	97	93.964	Cavia_porcellus
ENSCSAG00000006706	DKC1	100	90.078	ENSCCAG00000027418	DKC1	100	90.078	Cebus_capucinus
ENSCSAG00000006706	DKC1	100	99.805	ENSCATG00000033602	DKC1	100	99.805	Cercocebus_atys
ENSCSAG00000006706	DKC1	99	93.504	ENSCLAG00000000720	DKC1	100	93.504	Chinchilla_lanigera
ENSCSAG00000006706	DKC1	92	82.875	ENSCPBG00000005858	DKC1	93	87.045	Chrysemys_picta_bellii
ENSCSAG00000006706	DKC1	84	75.402	ENSCING00000004599	-	85	73.756	Ciona_intestinalis
ENSCSAG00000006706	DKC1	81	76.145	ENSCSAVG00000010047	-	96	74.246	Ciona_savignyi
ENSCSAG00000006706	DKC1	100	100.000	ENSCANG00000027987	DKC1	100	100.000	Colobus_angolensis_palliatus
ENSCSAG00000006706	DKC1	97	91.952	ENSCGRG00001014574	-	97	91.952	Cricetulus_griseus_chok1gshd
ENSCSAG00000006706	DKC1	96	65.314	ENSCGRG00001016789	-	98	64.909	Cricetulus_griseus_chok1gshd
ENSCSAG00000006706	DKC1	98	64.881	ENSCGRG00000014809	-	96	64.789	Cricetulus_griseus_crigri
ENSCSAG00000006706	DKC1	97	91.952	ENSCGRG00000016075	-	97	91.952	Cricetulus_griseus_crigri
ENSCSAG00000006706	DKC1	92	76.200	ENSCSEG00000012633	dkc1	90	79.412	Cynoglossus_semilaevis
ENSCSAG00000006706	DKC1	85	79.909	ENSCVAG00000010155	dkc1	83	79.909	Cyprinodon_variegatus
ENSCSAG00000006706	DKC1	79	85.185	ENSDARG00000016484	dkc1	85	80.045	Danio_rerio
ENSCSAG00000006706	DKC1	100	92.023	ENSDNOG00000004218	DKC1	100	92.023	Dasypus_novemcinctus
ENSCSAG00000006706	DKC1	58	83.000	ENSDORG00000013566	-	100	83.000	Dipodomys_ordii
ENSCSAG00000006706	DKC1	86	69.841	FBgn0259937	Nop60B	91	66.883	Drosophila_melanogaster
ENSCSAG00000006706	DKC1	91	87.794	ENSETEG00000016095	DKC1	99	87.169	Echinops_telfairi
ENSCSAG00000006706	DKC1	66	77.811	ENSEBUG00000015962	dkc1	99	81.911	Eptatretus_burgeri
ENSCSAG00000006706	DKC1	100	91.603	ENSEASG00005007484	DKC1	100	91.031	Equus_asinus_asinus
ENSCSAG00000006706	DKC1	100	91.603	ENSECAG00000023524	DKC1	100	91.031	Equus_caballus
ENSCSAG00000006706	DKC1	83	89.647	ENSEEUG00000003323	DKC1	99	89.647	Erinaceus_europaeus
ENSCSAG00000006706	DKC1	88	78.462	ENSELUG00000014538	dkc1	90	79.505	Esox_lucius
ENSCSAG00000006706	DKC1	100	92.023	ENSFCAG00000006577	DKC1	100	91.440	Felis_catus
ENSCSAG00000006706	DKC1	85	83.521	ENSFALG00000011496	DKC1	95	79.800	Ficedula_albicollis
ENSCSAG00000006706	DKC1	96	92.683	ENSFDAG00000002516	DKC1	100	92.534	Fukomys_damarensis
ENSCSAG00000006706	DKC1	86	80.045	ENSFHEG00000004627	dkc1	89	78.017	Fundulus_heteroclitus
ENSCSAG00000006706	DKC1	76	83.120	ENSGMOG00000017277	dkc1	100	83.120	Gadus_morhua
ENSCSAG00000006706	DKC1	85	86.239	ENSGALG00000005054	DKC1	85	85.360	Gallus_gallus
ENSCSAG00000006706	DKC1	85	80.227	ENSGAFG00000011486	dkc1	74	80.227	Gambusia_affinis
ENSCSAG00000006706	DKC1	77	86.869	ENSGACG00000004373	dkc1	96	88.754	Gasterosteus_aculeatus
ENSCSAG00000006706	DKC1	92	83.298	ENSGAGG00000011330	DKC1	89	84.946	Gopherus_agassizii
ENSCSAG00000006706	DKC1	100	99.416	ENSGGOG00000001045	DKC1	100	99.416	Gorilla_gorilla
ENSCSAG00000006706	DKC1	86	80.272	ENSHBUG00000012436	dkc1	86	79.910	Haplochromis_burtoni
ENSCSAG00000006706	DKC1	97	93.000	ENSHGLG00000000649	DKC1	100	93.037	Heterocephalus_glaber_female
ENSCSAG00000006706	DKC1	96	92.915	ENSHGLG00100001153	DKC1	100	92.955	Heterocephalus_glaber_male
ENSCSAG00000006706	DKC1	86	79.365	ENSHCOG00000021099	dkc1	86	80.045	Hippocampus_comes
ENSCSAG00000006706	DKC1	89	79.348	ENSIPUG00000010309	dkc1	88	79.348	Ictalurus_punctatus
ENSCSAG00000006706	DKC1	97	86.117	ENSSTOG00000020149	-	100	85.019	Ictidomys_tridecemlineatus
ENSCSAG00000006706	DKC1	95	94.867	ENSSTOG00000001074	-	100	94.867	Ictidomys_tridecemlineatus
ENSCSAG00000006706	DKC1	97	83.968	ENSSTOG00000011904	-	93	83.968	Ictidomys_tridecemlineatus
ENSCSAG00000006706	DKC1	58	84.000	ENSJJAG00000010086	-	100	84.000	Jaculus_jaculus
ENSCSAG00000006706	DKC1	86	78.555	ENSKMAG00000008010	dkc1	92	76.110	Kryptolebias_marmoratus
ENSCSAG00000006706	DKC1	85	80.182	ENSLBEG00000019122	dkc1	92	78.448	Labrus_bergylta
ENSCSAG00000006706	DKC1	87	81.737	ENSLACG00000014025	DKC1	91	88.191	Latimeria_chalumnae
ENSCSAG00000006706	DKC1	86	82.550	ENSLOCG00000013713	dkc1	88	83.945	Lepisosteus_oculatus
ENSCSAG00000006706	DKC1	96	91.147	ENSLAFG00000000221	DKC1	97	91.147	Loxodonta_africana
ENSCSAG00000006706	DKC1	100	99.805	ENSMFAG00000032398	DKC1	86	99.805	Macaca_fascicularis
ENSCSAG00000006706	DKC1	100	100.000	ENSMMUG00000005768	DKC1	100	100.000	Macaca_mulatta
ENSCSAG00000006706	DKC1	100	100.000	ENSMNEG00000034503	DKC1	100	100.000	Macaca_nemestrina
ENSCSAG00000006706	DKC1	100	100.000	ENSMLEG00000034422	DKC1	100	100.000	Mandrillus_leucophaeus
ENSCSAG00000006706	DKC1	80	84.841	ENSMAMG00000005427	dkc1	90	86.070	Mastacembelus_armatus
ENSCSAG00000006706	DKC1	86	80.499	ENSMZEG00005014503	dkc1	86	80.135	Maylandia_zebra
ENSCSAG00000006706	DKC1	77	86.432	ENSMGAG00000009238	DKC1	87	85.258	Meleagris_gallopavo
ENSCSAG00000006706	DKC1	58	83.667	ENSMAUG00000016454	-	100	83.667	Mesocricetus_auratus
ENSCSAG00000006706	DKC1	89	84.130	ENSMICG00000002818	-	99	84.130	Microcebus_murinus
ENSCSAG00000006706	DKC1	100	92.293	ENSMICG00000038751	-	100	92.293	Microcebus_murinus
ENSCSAG00000006706	DKC1	58	80.667	ENSMOCG00000001169	-	100	80.667	Microtus_ochrogaster
ENSCSAG00000006706	DKC1	77	86.364	ENSMMOG00000020348	dkc1	86	86.364	Mola_mola
ENSCSAG00000006706	DKC1	88	85.683	ENSMODG00000009243	DKC1	78	85.683	Monodelphis_domestica
ENSCSAG00000006706	DKC1	85	80.682	ENSMALG00000009454	dkc1	85	79.684	Monopterus_albus
ENSCSAG00000006706	DKC1	97	79.802	MGP_CAROLIEiJ_G0033191	Dkc1	100	92.568	Mus_caroli
ENSCSAG00000006706	DKC1	97	90.342	ENSMUSG00000031403	Dkc1	97	90.543	Mus_musculus
ENSCSAG00000006706	DKC1	97	89.940	MGP_PahariEiJ_G0031735	Dkc1	97	89.940	Mus_pahari
ENSCSAG00000006706	DKC1	97	90.141	MGP_SPRETEiJ_G0034351	Dkc1	97	91.147	Mus_spretus
ENSCSAG00000006706	DKC1	97	88.757	ENSMPUG00000016136	DKC1	93	90.138	Mustela_putorius_furo
ENSCSAG00000006706	DKC1	89	87.419	ENSMLUG00000011918	DKC1	100	83.333	Myotis_lucifugus
ENSCSAG00000006706	DKC1	58	83.667	ENSNGAG00000015724	-	100	83.667	Nannospalax_galili
ENSCSAG00000006706	DKC1	77	86.869	ENSNBRG00000005638	dkc1	80	86.869	Neolamprologus_brichardi
ENSCSAG00000006706	DKC1	100	99.027	ENSNLEG00000014323	DKC1	100	99.027	Nomascus_leucogenys
ENSCSAG00000006706	DKC1	82	85.343	ENSMEUG00000001066	DKC1	96	81.222	Notamacropus_eugenii
ENSCSAG00000006706	DKC1	99	75.835	ENSOPRG00000005248	DKC1	100	75.639	Ochotona_princeps
ENSCSAG00000006706	DKC1	85	95.183	ENSODEG00000011816	-	91	93.333	Octodon_degus
ENSCSAG00000006706	DKC1	58	85.000	ENSODEG00000000549	-	100	85.000	Octodon_degus
ENSCSAG00000006706	DKC1	94	77.189	ENSONIG00000013889	dkc1	95	77.393	Oreochromis_niloticus
ENSCSAG00000006706	DKC1	66	64.689	ENSOANG00000022295	-	95	64.223	Ornithorhynchus_anatinus
ENSCSAG00000006706	DKC1	93	87.344	ENSOANG00000008713	-	96	87.633	Ornithorhynchus_anatinus
ENSCSAG00000006706	DKC1	97	93.360	ENSOCUG00000012646	DKC1	100	92.233	Oryctolagus_cuniculus
ENSCSAG00000006706	DKC1	91	76.395	ENSORLG00000018748	dkc1	89	77.876	Oryzias_latipes
ENSCSAG00000006706	DKC1	78	84.653	ENSOMEG00000005786	dkc1	82	85.356	Oryzias_melastigma
ENSCSAG00000006706	DKC1	100	91.031	ENSOGAG00000003399	DKC1	100	91.412	Otolemur_garnettii
ENSCSAG00000006706	DKC1	100	90.078	ENSOARG00000003047	DKC1	100	89.883	Ovis_aries
ENSCSAG00000006706	DKC1	100	99.027	ENSPPAG00000023820	DKC1	100	99.027	Pan_paniscus
ENSCSAG00000006706	DKC1	91	93.991	ENSPPRG00000009104	DKC1	100	91.440	Panthera_pardus
ENSCSAG00000006706	DKC1	90	91.540	ENSPTIG00000017469	DKC1	99	89.194	Panthera_tigris_altaica
ENSCSAG00000006706	DKC1	100	99.416	ENSPTRG00000022449	DKC1	100	99.416	Pan_troglodytes
ENSCSAG00000006706	DKC1	98	99.406	ENSPTRG00000043416	-	85	99.406	Pan_troglodytes
ENSCSAG00000006706	DKC1	100	100.000	ENSPANG00000011978	DKC1	100	100.000	Papio_anubis
ENSCSAG00000006706	DKC1	85	81.422	ENSPKIG00000008443	dkc1	91	80.594	Paramormyrops_kingsleyae
ENSCSAG00000006706	DKC1	72	90.054	ENSPSIG00000013765	DKC1	86	92.737	Pelodiscus_sinensis
ENSCSAG00000006706	DKC1	86	75.391	ENSPMGG00000004097	dkc1	82	75.391	Periophthalmus_magnuspinnatus
ENSCSAG00000006706	DKC1	96	57.948	ENSPEMG00000013348	Dkc1	96	95.897	Peromyscus_maniculatus_bairdii
ENSCSAG00000006706	DKC1	87	87.082	ENSPCIG00000016706	DKC1	76	86.433	Phascolarctos_cinereus
ENSCSAG00000006706	DKC1	86	80.726	ENSPFOG00000018653	dkc1	86	80.726	Poecilia_formosa
ENSCSAG00000006706	DKC1	86	80.726	ENSPLAG00000003272	dkc1	77	80.726	Poecilia_latipinna
ENSCSAG00000006706	DKC1	86	80.726	ENSPMEG00000010413	dkc1	86	80.726	Poecilia_mexicana
ENSCSAG00000006706	DKC1	86	80.726	ENSPREG00000004100	dkc1	84	80.045	Poecilia_reticulata
ENSCSAG00000006706	DKC1	99	99.214	ENSPPYG00000020892	DKC1	100	99.214	Pongo_abelii
ENSCSAG00000006706	DKC1	73	93.566	ENSPCAG00000015034	DKC1	73	93.566	Procavia_capensis
ENSCSAG00000006706	DKC1	100	94.163	ENSPCOG00000026874	DKC1	100	94.163	Propithecus_coquereli
ENSCSAG00000006706	DKC1	97	89.537	ENSPVAG00000009222	DKC1	97	89.940	Pteropus_vampyrus
ENSCSAG00000006706	DKC1	86	79.775	ENSPNYG00000020063	dkc1	88	79.775	Pundamilia_nyererei
ENSCSAG00000006706	DKC1	90	79.526	ENSPNAG00000005780	dkc1	83	84.135	Pygocentrus_nattereri
ENSCSAG00000006706	DKC1	96	81.653	ENSRNOG00000055562	Dkc1	97	81.690	Rattus_norvegicus
ENSCSAG00000006706	DKC1	100	100.000	ENSRBIG00000028457	DKC1	86	100.000	Rhinopithecus_bieti
ENSCSAG00000006706	DKC1	100	100.000	ENSRROG00000044780	DKC1	100	100.000	Rhinopithecus_roxellana
ENSCSAG00000006706	DKC1	75	72.135	YLR175W	-	88	66.981	Saccharomyces_cerevisiae
ENSCSAG00000006706	DKC1	100	98.058	ENSSBOG00000033746	DKC1	100	98.058	Saimiri_boliviensis_boliviensis
ENSCSAG00000006706	DKC1	89	86.404	ENSSHAG00000002463	DKC1	97	85.129	Sarcophilus_harrisii
ENSCSAG00000006706	DKC1	90	79.957	ENSSFOG00015009585	dkc1	89	79.957	Scleropages_formosus
ENSCSAG00000006706	DKC1	95	74.704	ENSSMAG00000002552	dkc1	95	75.703	Scophthalmus_maximus
ENSCSAG00000006706	DKC1	85	81.693	ENSSDUG00000009963	dkc1	85	81.222	Seriola_dumerili
ENSCSAG00000006706	DKC1	91	77.399	ENSSLDG00000019342	dkc1	92	80.587	Seriola_lalandi_dorsalis
ENSCSAG00000006706	DKC1	98	82.470	ENSSARG00000001822	DKC1	96	82.787	Sorex_araneus
ENSCSAG00000006706	DKC1	84	86.270	ENSSPUG00000018907	DKC1	86	84.615	Sphenodon_punctatus
ENSCSAG00000006706	DKC1	90	77.282	ENSSPAG00000002585	dkc1	81	79.638	Stegastes_partitus
ENSCSAG00000006706	DKC1	100	90.095	ENSSSCG00000012823	DKC1	100	90.476	Sus_scrofa
ENSCSAG00000006706	DKC1	78	86.000	ENSTGUG00000006781	DKC1	100	81.897	Taeniopygia_guttata
ENSCSAG00000006706	DKC1	86	80.726	ENSTRUG00000004413	dkc1	86	80.726	Takifugu_rubripes
ENSCSAG00000006706	DKC1	86	65.101	ENSTNIG00000002582	dkc1	87	65.101	Tetraodon_nigroviridis
ENSCSAG00000006706	DKC1	71	92.308	ENSTBEG00000011262	DKC1	100	92.033	Tupaia_belangeri
ENSCSAG00000006706	DKC1	72	91.803	ENSTTRG00000008089	DKC1	73	91.803	Tursiops_truncatus
ENSCSAG00000006706	DKC1	95	91.348	ENSUAMG00000022721	DKC1	95	94.013	Ursus_americanus
ENSCSAG00000006706	DKC1	95	90.946	ENSUMAG00000016899	DKC1	92	97.884	Ursus_maritimus
ENSCSAG00000006706	DKC1	96	73.494	ENSVVUG00000021671	-	91	74.096	Vulpes_vulpes
ENSCSAG00000006706	DKC1	99	88.023	ENSVVUG00000020734	-	87	88.780	Vulpes_vulpes
ENSCSAG00000006706	DKC1	90	80.260	ENSXETG00000032517	DKC1	85	82.955	Xenopus_tropicalis
ENSCSAG00000006706	DKC1	86	79.412	ENSXCOG00000005498	dkc1	92	79.412	Xiphophorus_couchianus
ENSCSAG00000006706	DKC1	86	80.272	ENSXMAG00000004919	dkc1	86	80.272	Xiphophorus_maculatus