EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000007032 (Gene tree)
Gene ID: 103216194
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 56268 bases
Position: chr9:80314081-80370348
Accession: 103216194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000003308	DND1_DSRM	PF14709.7	7.2e-25	1	1
ENSCSAP00000003308	RRM_1	PF00076.22	4.5e-40	1	3
ENSCSAP00000003308	RRM_1	PF00076.22	4.5e-40	2	3
ENSCSAP00000003308	RRM_1	PF00076.22	4.5e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000005077	A1CF-201	6152	-	ENSCSAP00000003308	592 (aa)	XP_007961641	A0A0D9R3W9

Gene Model

Click here to download ENSCSAG00000007032's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000007032's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000007032	A1CF	74	58.628	ENSCSAG00000017060	RBM47	72	58.681
ENSCSAG00000007032	A1CF	68	72.667	ENSCSAG00000003263	RBM46	75	72.667
ENSCSAG00000007032	A1CF	52	52.427	ENSCSAG00000017365	SYNCRIP	57	51.077

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000007032	A1CF	100	98.151	ENSG00000148584	A1CF	100	99.502	Homo_sapiens
ENSCSAG00000007032	A1CF	100	73.544	ENSAPOG00000008259	a1cf	100	73.544	Acanthochromis_polyacanthus
ENSCSAG00000007032	A1CF	100	95.777	ENSAMEG00000000523	A1CF	100	95.777	Ailuropoda_melanoleuca
ENSCSAG00000007032	A1CF	100	75.530	ENSACIG00000008632	a1cf	100	76.672	Amphilophus_citrinellus
ENSCSAG00000007032	A1CF	100	74.220	ENSAOCG00000023744	a1cf	96	84.638	Amphiprion_ocellaris
ENSCSAG00000007032	A1CF	100	75.205	ENSAPEG00000009537	a1cf	100	76.026	Amphiprion_percula
ENSCSAG00000007032	A1CF	100	75.733	ENSATEG00000013720	a1cf	100	77.036	Anabas_testudineus
ENSCSAG00000007032	A1CF	100	89.713	ENSAPLG00000002964	A1CF	100	89.713	Anas_platyrhynchos
ENSCSAG00000007032	A1CF	100	83.642	ENSACAG00000015269	A1CF	100	83.642	Anolis_carolinensis
ENSCSAG00000007032	A1CF	100	97.138	ENSANAG00000019974	A1CF	100	97.138	Aotus_nancymaae
ENSCSAG00000007032	A1CF	100	73.399	ENSACLG00000017428	a1cf	100	74.877	Astatotilapia_calliptera
ENSCSAG00000007032	A1CF	100	74.380	ENSAMXG00000018180	a1cf	100	74.711	Astyanax_mexicanus
ENSCSAG00000007032	A1CF	100	93.950	ENSBTAG00000021195	A1CF	100	95.055	Bos_taurus
ENSCSAG00000007032	A1CF	100	98.485	ENSCJAG00000005045	A1CF	100	98.485	Callithrix_jacchus
ENSCSAG00000007032	A1CF	100	95.101	ENSCAFG00000015581	A1CF	100	95.608	Canis_familiaris
ENSCSAG00000007032	A1CF	100	95.101	ENSCAFG00020026421	A1CF	100	95.608	Canis_lupus_dingo
ENSCSAG00000007032	A1CF	100	94.958	ENSCHIG00000020411	A1CF	100	95.126	Capra_hircus
ENSCSAG00000007032	A1CF	95	96.791	ENSTSYG00000001755	A1CF	100	95.707	Carlito_syrichta
ENSCSAG00000007032	A1CF	100	83.436	ENSCAPG00000017386	A1CF	100	83.436	Cavia_aperea
ENSCSAG00000007032	A1CF	100	96.633	ENSCPOG00000009807	A1CF	100	96.633	Cavia_porcellus
ENSCSAG00000007032	A1CF	100	98.482	ENSCCAG00000018168	A1CF	100	98.482	Cebus_capucinus
ENSCSAG00000007032	A1CF	100	97.973	ENSCATG00000043715	A1CF	100	97.973	Cercocebus_atys
ENSCSAG00000007032	A1CF	100	96.141	ENSCLAG00000010424	A1CF	100	96.141	Chinchilla_lanigera
ENSCSAG00000007032	A1CF	98	89.322	ENSCHOG00000009089	A1CF	98	89.322	Choloepus_hoffmanni
ENSCSAG00000007032	A1CF	100	89.713	ENSCPBG00000026464	A1CF	100	89.207	Chrysemys_picta_bellii
ENSCSAG00000007032	A1CF	100	99.662	ENSCANG00000038032	A1CF	100	99.662	Colobus_angolensis_palliatus
ENSCSAG00000007032	A1CF	100	93.950	ENSCGRG00001017413	A1cf	100	93.950	Cricetulus_griseus_chok1gshd
ENSCSAG00000007032	A1CF	100	93.109	ENSCGRG00000017332	A1cf	100	93.782	Cricetulus_griseus_crigri
ENSCSAG00000007032	A1CF	100	74.627	ENSCSEG00000002361	a1cf	100	75.748	Cynoglossus_semilaevis
ENSCSAG00000007032	A1CF	100	74.593	ENSCVAG00000010520	a1cf	100	76.059	Cyprinodon_variegatus
ENSCSAG00000007032	A1CF	100	78.261	ENSDARG00000002968	a1cf	100	79.599	Danio_rerio
ENSCSAG00000007032	A1CF	100	94.790	ENSDNOG00000002829	A1CF	100	94.622	Dasypus_novemcinctus
ENSCSAG00000007032	A1CF	81	93.116	ENSETEG00000012527	A1CF	81	93.116	Echinops_telfairi
ENSCSAG00000007032	A1CF	100	96.482	ENSEASG00005012924	A1CF	100	96.482	Equus_asinus_asinus
ENSCSAG00000007032	A1CF	100	95.980	ENSECAG00000010424	A1CF	100	95.980	Equus_caballus
ENSCSAG00000007032	A1CF	78	80.472	ENSEEUG00000000013	A1CF	99	78.661	Erinaceus_europaeus
ENSCSAG00000007032	A1CF	100	79.264	ENSELUG00000003159	a1cf	100	80.100	Esox_lucius
ENSCSAG00000007032	A1CF	100	93.243	ENSFCAG00000011179	A1CF	100	93.243	Felis_catus
ENSCSAG00000007032	A1CF	100	86.509	ENSFALG00000013183	A1CF	100	86.509	Ficedula_albicollis
ENSCSAG00000007032	A1CF	100	94.286	ENSFDAG00000019371	A1CF	100	93.950	Fukomys_damarensis
ENSCSAG00000007032	A1CF	100	69.870	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSCSAG00000007032	A1CF	100	71.570	ENSGMOG00000018943	a1cf	100	71.736	Gadus_morhua
ENSCSAG00000007032	A1CF	95	88.968	ENSGALG00000003765	A1CF	97	88.968	Gallus_gallus
ENSCSAG00000007032	A1CF	100	69.901	ENSGAFG00000014868	a1cf	100	70.888	Gambusia_affinis
ENSCSAG00000007032	A1CF	100	73.684	ENSGACG00000010241	a1cf	100	74.342	Gasterosteus_aculeatus
ENSCSAG00000007032	A1CF	94	89.643	ENSGAGG00000016508	A1CF	97	89.107	Gopherus_agassizii
ENSCSAG00000007032	A1CF	100	97.983	ENSGGOG00000009670	A1CF	100	97.983	Gorilla_gorilla
ENSCSAG00000007032	A1CF	100	75.041	ENSHBUG00000021959	a1cf	100	76.346	Haplochromis_burtoni
ENSCSAG00000007032	A1CF	100	96.303	ENSHGLG00000008955	A1CF	100	96.303	Heterocephalus_glaber_female
ENSCSAG00000007032	A1CF	100	95.630	ENSHGLG00100000518	A1CF	100	95.294	Heterocephalus_glaber_male
ENSCSAG00000007032	A1CF	100	69.935	ENSHCOG00000017669	a1cf	100	72.594	Hippocampus_comes
ENSCSAG00000007032	A1CF	90	83.209	ENSIPUG00000010367	a1cf	96	83.209	Ictalurus_punctatus
ENSCSAG00000007032	A1CF	100	76.423	ENSKMAG00000006568	a1cf	100	77.236	Kryptolebias_marmoratus
ENSCSAG00000007032	A1CF	99	75.450	ENSLBEG00000020994	a1cf	98	77.265	Labrus_bergylta
ENSCSAG00000007032	A1CF	100	81.711	ENSLACG00000008061	A1CF	100	81.711	Latimeria_chalumnae
ENSCSAG00000007032	A1CF	100	83.082	ENSLOCG00000006302	a1cf	100	83.082	Lepisosteus_oculatus
ENSCSAG00000007032	A1CF	100	94.622	ENSLAFG00000015462	A1CF	100	94.622	Loxodonta_africana
ENSCSAG00000007032	A1CF	100	98.311	ENSMFAG00000035948	A1CF	100	98.311	Macaca_fascicularis
ENSCSAG00000007032	A1CF	100	98.311	ENSMMUG00000007077	A1CF	100	98.311	Macaca_mulatta
ENSCSAG00000007032	A1CF	100	97.973	ENSMNEG00000031454	A1CF	100	97.973	Macaca_nemestrina
ENSCSAG00000007032	A1CF	100	99.324	ENSMLEG00000037223	A1CF	100	99.324	Mandrillus_leucophaeus
ENSCSAG00000007032	A1CF	100	73.650	ENSMAMG00000010402	a1cf	100	75.654	Mastacembelus_armatus
ENSCSAG00000007032	A1CF	100	76.214	ENSMZEG00005013245	a1cf	100	77.219	Maylandia_zebra
ENSCSAG00000007032	A1CF	100	89.057	ENSMGAG00000001507	A1CF	100	89.057	Meleagris_gallopavo
ENSCSAG00000007032	A1CF	100	93.109	ENSMAUG00000007422	A1cf	100	93.613	Mesocricetus_auratus
ENSCSAG00000007032	A1CF	100	93.478	ENSMICG00000003377	A1CF	100	93.980	Microcebus_murinus
ENSCSAG00000007032	A1CF	100	93.277	ENSMOCG00000021536	A1cf	100	93.445	Microtus_ochrogaster
ENSCSAG00000007032	A1CF	100	67.652	ENSMMOG00000009422	a1cf	100	69.572	Mola_mola
ENSCSAG00000007032	A1CF	92	90.275	ENSMODG00000016478	A1CF	99	90.275	Monodelphis_domestica
ENSCSAG00000007032	A1CF	100	72.027	ENSMALG00000012992	a1cf	100	72.027	Monopterus_albus
ENSCSAG00000007032	A1CF	100	93.277	MGP_CAROLIEiJ_G0022873	A1cf	100	93.782	Mus_caroli
ENSCSAG00000007032	A1CF	100	93.277	ENSMUSG00000052595	A1cf	99	96.053	Mus_musculus
ENSCSAG00000007032	A1CF	100	93.109	MGP_PahariEiJ_G0014366	A1cf	100	93.109	Mus_pahari
ENSCSAG00000007032	A1CF	100	92.773	MGP_SPRETEiJ_G0023792	A1cf	100	93.277	Mus_spretus
ENSCSAG00000007032	A1CF	100	90.372	ENSMPUG00000016971	A1CF	100	90.372	Mustela_putorius_furo
ENSCSAG00000007032	A1CF	100	93.950	ENSMLUG00000016071	A1CF	100	93.950	Myotis_lucifugus
ENSCSAG00000007032	A1CF	100	94.622	ENSNGAG00000015136	A1cf	100	94.622	Nannospalax_galili
ENSCSAG00000007032	A1CF	100	75.041	ENSNBRG00000001712	a1cf	100	76.346	Neolamprologus_brichardi
ENSCSAG00000007032	A1CF	100	98.824	ENSNLEG00000012028	A1CF	100	98.824	Nomascus_leucogenys
ENSCSAG00000007032	A1CF	94	90.536	ENSMEUG00000015909	A1CF	100	90.357	Notamacropus_eugenii
ENSCSAG00000007032	A1CF	89	85.333	ENSOPRG00000010667	A1CF	97	85.472	Ochotona_princeps
ENSCSAG00000007032	A1CF	100	74.715	ENSONIG00000019105	a1cf	100	76.346	Oreochromis_niloticus
ENSCSAG00000007032	A1CF	78	89.079	ENSOANG00000007360	A1CF	99	89.079	Ornithorhynchus_anatinus
ENSCSAG00000007032	A1CF	100	92.785	ENSOCUG00000011587	A1CF	100	93.456	Oryctolagus_cuniculus
ENSCSAG00000007032	A1CF	100	73.821	ENSORLG00000013342	a1cf	100	73.821	Oryzias_latipes
ENSCSAG00000007032	A1CF	100	75.450	ENSORLG00020000586	a1cf	100	75.450	Oryzias_latipes_hni
ENSCSAG00000007032	A1CF	100	75.614	ENSORLG00015018569	a1cf	100	75.614	Oryzias_latipes_hsok
ENSCSAG00000007032	A1CF	100	74.795	ENSOMEG00000013531	a1cf	100	74.795	Oryzias_melastigma
ENSCSAG00000007032	A1CF	100	96.115	ENSOGAG00000012884	A1CF	100	96.115	Otolemur_garnettii
ENSCSAG00000007032	A1CF	100	94.790	ENSOARG00000013695	A1CF	100	94.958	Ovis_aries
ENSCSAG00000007032	A1CF	97	96.014	ENSPPAG00000028115	A1CF	100	98.988	Pan_paniscus
ENSCSAG00000007032	A1CF	100	94.932	ENSPPRG00000012180	A1CF	100	94.932	Panthera_pardus
ENSCSAG00000007032	A1CF	100	94.932	ENSPTIG00000021223	A1CF	100	94.932	Panthera_tigris_altaica
ENSCSAG00000007032	A1CF	100	97.815	ENSPTRG00000002508	A1CF	100	97.815	Pan_troglodytes
ENSCSAG00000007032	A1CF	100	98.311	ENSPANG00000021988	A1CF	100	98.311	Papio_anubis
ENSCSAG00000007032	A1CF	100	80.936	ENSPKIG00000025176	a1cf	100	80.769	Paramormyrops_kingsleyae
ENSCSAG00000007032	A1CF	100	88.027	ENSPSIG00000010318	A1CF	100	87.858	Pelodiscus_sinensis
ENSCSAG00000007032	A1CF	89	71.048	ENSPMGG00000013359	a1cf	99	67.238	Periophthalmus_magnuspinnatus
ENSCSAG00000007032	A1CF	100	94.958	ENSPEMG00000015021	A1cf	100	94.790	Peromyscus_maniculatus_bairdii
ENSCSAG00000007032	A1CF	100	90.051	ENSPCIG00000002175	A1CF	100	89.882	Phascolarctos_cinereus
ENSCSAG00000007032	A1CF	100	75.733	ENSPFOG00000007437	-	100	77.199	Poecilia_formosa
ENSCSAG00000007032	A1CF	100	75.896	ENSPFOG00000006683	a1cf	100	77.362	Poecilia_formosa
ENSCSAG00000007032	A1CF	100	74.593	ENSPLAG00000000026	a1cf	100	76.059	Poecilia_latipinna
ENSCSAG00000007032	A1CF	100	74.593	ENSPLAG00000001210	-	100	76.059	Poecilia_latipinna
ENSCSAG00000007032	A1CF	100	67.157	ENSPMEG00000000921	a1cf	100	68.627	Poecilia_mexicana
ENSCSAG00000007032	A1CF	100	68.301	ENSPMEG00000015529	-	100	69.771	Poecilia_mexicana
ENSCSAG00000007032	A1CF	100	75.570	ENSPREG00000016298	a1cf	100	77.036	Poecilia_reticulata
ENSCSAG00000007032	A1CF	100	97.311	ENSPPYG00000002819	A1CF	100	97.311	Pongo_abelii
ENSCSAG00000007032	A1CF	79	73.729	ENSPCAG00000006463	A1CF	70	87.755	Procavia_capensis
ENSCSAG00000007032	A1CF	100	96.644	ENSPCOG00000024172	A1CF	100	96.644	Propithecus_coquereli
ENSCSAG00000007032	A1CF	100	76.346	ENSPNYG00000017944	a1cf	100	77.651	Pundamilia_nyererei
ENSCSAG00000007032	A1CF	100	79.470	ENSPNAG00000007704	a1cf	100	79.470	Pygocentrus_nattereri
ENSCSAG00000007032	A1CF	100	91.933	ENSRNOG00000033195	A1cf	100	92.437	Rattus_norvegicus
ENSCSAG00000007032	A1CF	100	92.929	ENSRBIG00000042892	A1CF	100	96.850	Rhinopithecus_bieti
ENSCSAG00000007032	A1CF	100	99.662	ENSRROG00000041398	A1CF	100	99.662	Rhinopithecus_roxellana
ENSCSAG00000007032	A1CF	100	98.151	ENSSBOG00000021930	A1CF	100	98.151	Saimiri_boliviensis_boliviensis
ENSCSAG00000007032	A1CF	100	90.219	ENSSHAG00000005096	A1CF	100	90.219	Sarcophilus_harrisii
ENSCSAG00000007032	A1CF	100	78.939	ENSSFOG00015011774	a1cf	100	78.939	Scleropages_formosus
ENSCSAG00000007032	A1CF	100	75.407	ENSSMAG00000013271	a1cf	100	75.733	Scophthalmus_maximus
ENSCSAG00000007032	A1CF	100	76.451	ENSSDUG00000013930	a1cf	100	77.280	Seriola_dumerili
ENSCSAG00000007032	A1CF	100	69.472	ENSSLDG00000004290	a1cf	100	70.462	Seriola_lalandi_dorsalis
ENSCSAG00000007032	A1CF	95	83.392	ENSSARG00000005940	A1CF	96	83.746	Sorex_araneus
ENSCSAG00000007032	A1CF	95	88.516	ENSSPUG00000006797	A1CF	95	87.633	Sphenodon_punctatus
ENSCSAG00000007032	A1CF	100	95.462	ENSSSCG00000010431	A1CF	100	95.462	Sus_scrofa
ENSCSAG00000007032	A1CF	100	87.625	ENSTGUG00000005090	A1CF	100	87.625	Taeniopygia_guttata
ENSCSAG00000007032	A1CF	100	74.225	ENSTRUG00000001982	a1cf	100	74.225	Takifugu_rubripes
ENSCSAG00000007032	A1CF	100	75.285	ENSTNIG00000003580	a1cf	100	74.959	Tetraodon_nigroviridis
ENSCSAG00000007032	A1CF	97	86.828	ENSTTRG00000013190	A1CF	95	87.002	Tursiops_truncatus
ENSCSAG00000007032	A1CF	100	94.426	ENSUAMG00000020065	A1CF	100	94.426	Ursus_americanus
ENSCSAG00000007032	A1CF	100	95.270	ENSUMAG00000011162	A1CF	100	95.270	Ursus_maritimus
ENSCSAG00000007032	A1CF	87	89.827	ENSVPAG00000006130	A1CF	86	89.827	Vicugna_pacos
ENSCSAG00000007032	A1CF	100	93.919	ENSVVUG00000002504	A1CF	100	94.088	Vulpes_vulpes
ENSCSAG00000007032	A1CF	100	79.062	ENSXETG00000006611	a1cf	100	78.894	Xenopus_tropicalis
ENSCSAG00000007032	A1CF	100	75.902	ENSXCOG00000003302	a1cf	100	76.885	Xiphophorus_couchianus
ENSCSAG00000007032	A1CF	100	77.049	ENSXMAG00000016703	a1cf	100	78.033	Xiphophorus_maculatus