EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAG00000007125 (Gene tree)
Gene ID
103220849
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Chlorocebus_sabaeus
Status
putative
Strand
Minus strand
Length
53791 bases
Position
chr14:98173117-98226907
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAP00000003400CPSF73-100_CPF11718.85.3e-5511
ENSCSAP00000003400Beta-CaspPF10996.84.4e-1311
ENSCSAP00000003400Lactamase_BPF00753.276.5e-1911
ENSCSAP00000003400RMMBLPF07521.127.9e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAT00000005166CPSF3-2013404-ENSCSAP00000003400631 (aa)-A0A0D9R461
Gene Model
Click here to download ENSCSAG00000007125's gene model file
Pathways
Pathway IDPathway NameSource
csab03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000007125's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAG00000007125CPSF36235.619ENSCSAG00000000681INTS117435.619
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAG00000007125CPSF310091.959ENSG00000119203CPSF3100100.000Homo_sapiens
ENSCSAG00000007125CPSF37285.375ENSAPOG00000012241CPSF39185.375Acanthochromis_polyacanthus
ENSCSAG00000007125CPSF39977.467ENSAPOG00000022087cpsf39877.467Acanthochromis_polyacanthus
ENSCSAG00000007125CPSF310091.667ENSAMEG00000008493CPSF310091.667Ailuropoda_melanoleuca
ENSCSAG00000007125CPSF39174.363ENSACIG00000009846cpsf39974.363Amphilophus_citrinellus
ENSCSAG00000007125CPSF39177.937ENSACIG00000023663CPSF39977.937Amphilophus_citrinellus
ENSCSAG00000007125CPSF39980.000ENSAOCG00000010077CPSF39880.000Amphiprion_ocellaris
ENSCSAG00000007125CPSF39977.467ENSAOCG00000022056cpsf39482.143Amphiprion_ocellaris
ENSCSAG00000007125CPSF39977.614ENSAPEG00000019526cpsf39877.614Amphiprion_percula
ENSCSAG00000007125CPSF39980.000ENSAPEG00000021167CPSF39880.000Amphiprion_percula
ENSCSAG00000007125CPSF39975.294ENSATEG00000014525CPSF39875.294Anabas_testudineus
ENSCSAG00000007125CPSF39977.467ENSATEG00000003959cpsf39877.467Anabas_testudineus
ENSCSAG00000007125CPSF39887.351ENSAPLG00000006941CPSF39887.351Anas_platyrhynchos
ENSCSAG00000007125CPSF39284.567ENSACAG00000001759CPSF39984.567Anolis_carolinensis
ENSCSAG00000007125CPSF310085.380ENSANAG00000031254CPSF310085.380Aotus_nancymaae
ENSCSAG00000007125CPSF39995.820ENSACLG00000014484cpsf38895.820Astatotilapia_calliptera
ENSCSAG00000007125CPSF39177.778ENSACLG00000018846CPSF39977.778Astatotilapia_calliptera
ENSCSAG00000007125CPSF39980.294ENSAMXG00000004786cpsf39880.294Astyanax_mexicanus
ENSCSAG00000007125CPSF310091.813ENSBTAG00000019735CPSF310091.813Bos_taurus
ENSCSAG00000007125CPSF39053.071WBGene00013460cpsf-38952.913Caenorhabditis_elegans
ENSCSAG00000007125CPSF310091.959ENSCJAG00000006276CPSF310091.959Callithrix_jacchus
ENSCSAG00000007125CPSF310091.667ENSCAFG00000003375CPSF39591.667Canis_familiaris
ENSCSAG00000007125CPSF39091.438ENSCAFG00020026799CPSF310091.438Canis_lupus_dingo
ENSCSAG00000007125CPSF310091.813ENSCHIG00000013973CPSF310091.813Capra_hircus
ENSCSAG00000007125CPSF310091.959ENSTSYG00000002967CPSF310091.959Carlito_syrichta
ENSCSAG00000007125CPSF39789.805ENSCAPG00000013851CPSF310089.805Cavia_aperea
ENSCSAG00000007125CPSF310090.058ENSCPOG00000011299CPSF310090.058Cavia_porcellus
ENSCSAG00000007125CPSF310092.105ENSCCAG00000036730CPSF310092.105Cebus_capucinus
ENSCSAG00000007125CPSF310089.635ENSCATG00000014770CPSF39990.878Cercocebus_atys
ENSCSAG00000007125CPSF310089.620ENSCLAG00000002727CPSF310089.620Chinchilla_lanigera
ENSCSAG00000007125CPSF379100.000ENSCHOG00000000180CPSF372100.000Choloepus_hoffmanni
ENSCSAG00000007125CPSF39987.683ENSCPBG00000014074CPSF39987.683Chrysemys_picta_bellii
ENSCSAG00000007125CPSF39961.257ENSCING00000007214-9861.257Ciona_intestinalis
ENSCSAG00000007125CPSF310078.801ENSCANG00000034435CPSF310078.801Colobus_angolensis_palliatus
ENSCSAG00000007125CPSF310091.374ENSCGRG00001013134Cpsf310091.374Cricetulus_griseus_chok1gshd
ENSCSAG00000007125CPSF310091.374ENSCGRG00000018319Cpsf310091.374Cricetulus_griseus_crigri
ENSCSAG00000007125CPSF39978.855ENSCSEG00000002021CPSF39978.207Cynoglossus_semilaevis
ENSCSAG00000007125CPSF35171.429ENSCVAG00000022039-9571.429Cyprinodon_variegatus
ENSCSAG00000007125CPSF39980.294ENSCVAG00000015067CPSF39880.294Cyprinodon_variegatus
ENSCSAG00000007125CPSF39981.029ENSDARG00000027649cpsf39881.029Danio_rerio
ENSCSAG00000007125CPSF310089.927ENSDNOG00000008940CPSF39589.927Dasypus_novemcinctus
ENSCSAG00000007125CPSF39590.937ENSDORG00000014263Cpsf310090.937Dipodomys_ordii
ENSCSAG00000007125CPSF39960.530FBgn0261065Cpsf739860.530Drosophila_melanogaster
ENSCSAG00000007125CPSF39577.419ENSETEG00000003893CPSF310077.419Echinops_telfairi
ENSCSAG00000007125CPSF39971.347ENSEBUG00000009018cpsf39871.490Eptatretus_burgeri
ENSCSAG00000007125CPSF310091.667ENSEASG00005003970CPSF310091.667Equus_asinus_asinus
ENSCSAG00000007125CPSF310091.667ENSECAG00000019911CPSF310091.667Equus_caballus
ENSCSAG00000007125CPSF39396.667ENSEEUG00000015422CPSF38596.667Erinaceus_europaeus
ENSCSAG00000007125CPSF39980.147ENSELUG00000013775cpsf39880.147Esox_lucius
ENSCSAG00000007125CPSF310091.813ENSFCAG00000007852CPSF310091.813Felis_catus
ENSCSAG00000007125CPSF39487.017ENSFALG00000006572CPSF310087.017Ficedula_albicollis
ENSCSAG00000007125CPSF39989.443ENSFDAG00000006317CPSF39989.443Fukomys_damarensis
ENSCSAG00000007125CPSF35675.339ENSFHEG00000012186CPSF39975.339Fundulus_heteroclitus
ENSCSAG00000007125CPSF39977.320ENSFHEG00000014774cpsf39877.320Fundulus_heteroclitus
ENSCSAG00000007125CPSF39978.676ENSGMOG00000003157cpsf39878.676Gadus_morhua
ENSCSAG00000007125CPSF39987.225ENSGALG00000016424CPSF39987.225Gallus_gallus
ENSCSAG00000007125CPSF39174.404ENSGAFG00000019449cpsf39974.404Gambusia_affinis
ENSCSAG00000007125CPSF39980.118ENSGAFG00000008016CPSF39880.118Gambusia_affinis
ENSCSAG00000007125CPSF36682.013ENSGAGG00000025583CPSF39382.013Gopherus_agassizii
ENSCSAG00000007125CPSF310089.843ENSGGOG00000001757CPSF310091.496Gorilla_gorilla
ENSCSAG00000007125CPSF39977.827ENSHBUG00000001188cpsf39977.827Haplochromis_burtoni
ENSCSAG00000007125CPSF35668.148ENSHBUG00000014332CPSF39968.148Haplochromis_burtoni
ENSCSAG00000007125CPSF310089.035ENSHGLG00000000666CPSF39989.035Heterocephalus_glaber_female
ENSCSAG00000007125CPSF310089.035ENSHGLG00100007765CPSF39989.035Heterocephalus_glaber_male
ENSCSAG00000007125CPSF39978.382ENSHCOG00000015957CPSF39778.382Hippocampus_comes
ENSCSAG00000007125CPSF39976.979ENSHCOG00000007251cpsf39976.979Hippocampus_comes
ENSCSAG00000007125CPSF39979.118ENSIPUG00000023488cpsf39879.118Ictalurus_punctatus
ENSCSAG00000007125CPSF310091.082ENSSTOG00000004476CPSF310091.082Ictidomys_tridecemlineatus
ENSCSAG00000007125CPSF310090.205ENSJJAG00000023415Cpsf310090.205Jaculus_jaculus
ENSCSAG00000007125CPSF39979.706ENSKMAG00000007317CPSF39879.706Kryptolebias_marmoratus
ENSCSAG00000007125CPSF39977.025ENSKMAG00000002806cpsf39877.025Kryptolebias_marmoratus
ENSCSAG00000007125CPSF39974.102ENSLBEG00000020569cpsf39474.102Labrus_bergylta
ENSCSAG00000007125CPSF39480.710ENSLBEG00000013492CPSF39880.710Labrus_bergylta
ENSCSAG00000007125CPSF35165.147ENSLBEG00000015018-9965.147Labrus_bergylta
ENSCSAG00000007125CPSF39980.220ENSLACG00000008308CPSF39880.220Latimeria_chalumnae
ENSCSAG00000007125CPSF39981.351ENSLOCG00000016823cpsf39881.351Lepisosteus_oculatus
ENSCSAG00000007125CPSF39989.853ENSLAFG00000009467CPSF310089.853Loxodonta_africana
ENSCSAG00000007125CPSF310092.251ENSMFAG00000001339CPSF310092.251Macaca_fascicularis
ENSCSAG00000007125CPSF39491.808ENSMMUG00000018038CPSF310091.808Macaca_mulatta
ENSCSAG00000007125CPSF310092.114ENSMNEG00000039447CPSF310092.114Macaca_nemestrina
ENSCSAG00000007125CPSF310092.105ENSMLEG00000026825CPSF310092.105Mandrillus_leucophaeus
ENSCSAG00000007125CPSF39176.741ENSMAMG00000008835CPSF39976.741Mastacembelus_armatus
ENSCSAG00000007125CPSF39977.761ENSMAMG00000003076cpsf39877.761Mastacembelus_armatus
ENSCSAG00000007125CPSF39977.827ENSMZEG00005014358cpsf39977.827Maylandia_zebra
ENSCSAG00000007125CPSF39980.588ENSMZEG00005006258CPSF39880.588Maylandia_zebra
ENSCSAG00000007125CPSF39787.106ENSMGAG00000013995CPSF310087.106Meleagris_gallopavo
ENSCSAG00000007125CPSF35198.438ENSMAUG00000000166Cpsf38598.438Mesocricetus_auratus
ENSCSAG00000007125CPSF310086.111ENSMICG00000002363CPSF310086.111Microcebus_murinus
ENSCSAG00000007125CPSF310086.842ENSMOCG00000020067Cpsf310086.842Microtus_ochrogaster
ENSCSAG00000007125CPSF39953.678ENSMMOG00000011923CPSF39955.312Mola_mola
ENSCSAG00000007125CPSF39473.953ENSMMOG00000018212CPSF39873.953Mola_mola
ENSCSAG00000007125CPSF310088.278ENSMODG00000014703CPSF310088.278Monodelphis_domestica
ENSCSAG00000007125CPSF39275.000ENSMALG00000011474CPSF39975.000Monopterus_albus
ENSCSAG00000007125CPSF39978.120ENSMALG00000016416cpsf39978.120Monopterus_albus
ENSCSAG00000007125CPSF310091.082MGP_CAROLIEiJ_G0017640Cpsf310091.082Mus_caroli
ENSCSAG00000007125CPSF310091.082ENSMUSG00000054309Cpsf396100.000Mus_musculus
ENSCSAG00000007125CPSF310090.936MGP_PahariEiJ_G0029397Cpsf310090.936Mus_pahari
ENSCSAG00000007125CPSF310091.082MGP_SPRETEiJ_G0018481Cpsf310091.082Mus_spretus
ENSCSAG00000007125CPSF310090.936ENSMPUG00000013213CPSF310090.936Mustela_putorius_furo
ENSCSAG00000007125CPSF310090.657ENSMLUG00000010636CPSF310090.657Myotis_lucifugus
ENSCSAG00000007125CPSF310091.228ENSNGAG00000019836Cpsf310091.228Nannospalax_galili
ENSCSAG00000007125CPSF39177.778ENSNBRG00000010525CPSF39977.778Neolamprologus_brichardi
ENSCSAG00000007125CPSF39995.820ENSNBRG00000004770cpsf38895.820Neolamprologus_brichardi
ENSCSAG00000007125CPSF310092.251ENSNLEG00000013359CPSF310092.251Nomascus_leucogenys
ENSCSAG00000007125CPSF39170.000ENSMEUG00000013117-8470.000Notamacropus_eugenii
ENSCSAG00000007125CPSF39199.209ENSOPRG00000008902CPSF38499.209Ochotona_princeps
ENSCSAG00000007125CPSF310089.181ENSODEG00000003129CPSF310089.181Octodon_degus
ENSCSAG00000007125CPSF39977.974ENSONIG00000018812cpsf39977.974Oreochromis_niloticus
ENSCSAG00000007125CPSF38186.879ENSOANG00000008577CPSF310086.879Ornithorhynchus_anatinus
ENSCSAG00000007125CPSF310091.228ENSOCUG00000003728CPSF310091.228Oryctolagus_cuniculus
ENSCSAG00000007125CPSF39975.624ENSORLG00000018854cpsf39975.624Oryzias_latipes
ENSCSAG00000007125CPSF39975.624ENSORLG00020013331cpsf39975.624Oryzias_latipes_hni
ENSCSAG00000007125CPSF39975.624ENSORLG00015011017cpsf39975.624Oryzias_latipes_hsok
ENSCSAG00000007125CPSF39975.918ENSOMEG00000010647cpsf39475.918Oryzias_melastigma
ENSCSAG00000007125CPSF310082.164ENSOGAG00000001680CPSF310082.164Otolemur_garnettii
ENSCSAG00000007125CPSF310091.813ENSOARG00000015073CPSF310091.813Ovis_aries
ENSCSAG00000007125CPSF310092.105ENSPPAG00000042457CPSF310092.105Pan_paniscus
ENSCSAG00000007125CPSF310091.520ENSPPRG00000016790CPSF310091.520Panthera_pardus
ENSCSAG00000007125CPSF39991.471ENSPTIG00000003920CPSF310090.866Panthera_tigris_altaica
ENSCSAG00000007125CPSF310092.105ENSPTRG00000011638CPSF310092.105Pan_troglodytes
ENSCSAG00000007125CPSF310092.105ENSPANG00000016798CPSF310092.105Papio_anubis
ENSCSAG00000007125CPSF39981.618ENSPKIG00000023646cpsf39980.930Paramormyrops_kingsleyae
ENSCSAG00000007125CPSF39985.944ENSPSIG00000016144CPSF310085.944Pelodiscus_sinensis
ENSCSAG00000007125CPSF35665.926ENSPMGG00000015311CPSF39965.926Periophthalmus_magnuspinnatus
ENSCSAG00000007125CPSF38176.091ENSPMGG00000006141-9976.091Periophthalmus_magnuspinnatus
ENSCSAG00000007125CPSF310090.789ENSPEMG00000017668Cpsf310090.789Peromyscus_maniculatus_bairdii
ENSCSAG00000007125CPSF37680.447ENSPMAG00000004841cpsf39980.447Petromyzon_marinus
ENSCSAG00000007125CPSF39789.505ENSPCIG00000009823CPSF39889.505Phascolarctos_cinereus
ENSCSAG00000007125CPSF39976.979ENSPFOG00000015922cpsf39976.979Poecilia_formosa
ENSCSAG00000007125CPSF39979.823ENSPFOG00000010418-9879.823Poecilia_formosa
ENSCSAG00000007125CPSF35667.327ENSPLAG00000021300-9967.327Poecilia_latipinna
ENSCSAG00000007125CPSF39976.979ENSPLAG00000000882cpsf39976.979Poecilia_latipinna
ENSCSAG00000007125CPSF39977.126ENSPMEG00000018309cpsf39977.126Poecilia_mexicana
ENSCSAG00000007125CPSF39974.521ENSPREG00000004482CPSF39874.521Poecilia_reticulata
ENSCSAG00000007125CPSF39174.245ENSPREG00000014875cpsf39974.245Poecilia_reticulata
ENSCSAG00000007125CPSF310087.865ENSPPYG00000012666CPSF310087.865Pongo_abelii
ENSCSAG00000007125CPSF38780.449ENSPCAG00000015042CPSF38480.449Procavia_capensis
ENSCSAG00000007125CPSF310082.622ENSPCOG00000023016CPSF310082.622Propithecus_coquereli
ENSCSAG00000007125CPSF39991.642ENSPVAG00000005324CPSF39991.642Pteropus_vampyrus
ENSCSAG00000007125CPSF37781.768ENSPNYG00000021047CPSF39181.768Pundamilia_nyererei
ENSCSAG00000007125CPSF39977.827ENSPNYG00000004405cpsf39977.827Pundamilia_nyererei
ENSCSAG00000007125CPSF39979.706ENSPNAG00000023060cpsf39879.706Pygocentrus_nattereri
ENSCSAG00000007125CPSF39991.056ENSRNOG00000052418Cpsf39991.056Rattus_norvegicus
ENSCSAG00000007125CPSF310086.111ENSRBIG00000041615CPSF310086.111Rhinopithecus_bieti
ENSCSAG00000007125CPSF310092.105ENSRROG00000033792CPSF310092.105Rhinopithecus_roxellana
ENSCSAG00000007125CPSF39336.644YLR277CYSH19536.376Saccharomyces_cerevisiae
ENSCSAG00000007125CPSF310086.087ENSSBOG00000027263CPSF310086.087Saimiri_boliviensis_boliviensis
ENSCSAG00000007125CPSF310089.912ENSSHAG00000007024CPSF310089.912Sarcophilus_harrisii
ENSCSAG00000007125CPSF39981.645ENSSFOG00015002108cpsf39981.645Scleropages_formosus
ENSCSAG00000007125CPSF39479.321ENSSMAG00000020534CPSF39579.321Scophthalmus_maximus
ENSCSAG00000007125CPSF39980.147ENSSDUG00000018498CPSF39880.147Seriola_dumerili
ENSCSAG00000007125CPSF39977.680ENSSDUG00000002828cpsf39677.680Seriola_dumerili
ENSCSAG00000007125CPSF39977.680ENSSLDG00000008469cpsf39677.680Seriola_lalandi_dorsalis
ENSCSAG00000007125CPSF39980.147ENSSLDG00000005234CPSF39880.147Seriola_lalandi_dorsalis
ENSCSAG00000007125CPSF310073.538ENSSARG00000005186CPSF310073.538Sorex_araneus
ENSCSAG00000007125CPSF39784.352ENSSPUG00000015525CPSF39784.352Sphenodon_punctatus
ENSCSAG00000007125CPSF39977.614ENSSPAG00000018579cpsf39877.614Stegastes_partitus
ENSCSAG00000007125CPSF39979.853ENSSPAG00000002906CPSF39879.853Stegastes_partitus
ENSCSAG00000007125CPSF39991.508ENSSSCG00000020799CPSF39991.508Sus_scrofa
ENSCSAG00000007125CPSF39987.518ENSTGUG00000013016CPSF39987.518Taeniopygia_guttata
ENSCSAG00000007125CPSF39976.912ENSTRUG00000007030cpsf39776.912Takifugu_rubripes
ENSCSAG00000007125CPSF35659.951ENSTRUG00000013905CPSF39959.951Takifugu_rubripes
ENSCSAG00000007125CPSF38492.628ENSTBEG00000002707CPSF37692.628Tupaia_belangeri
ENSCSAG00000007125CPSF38798.387ENSTTRG00000000861CPSF38898.387Tursiops_truncatus
ENSCSAG00000007125CPSF39988.563ENSUAMG00000007535CPSF39888.563Ursus_americanus
ENSCSAG00000007125CPSF39491.190ENSUMAG00000003676CPSF310091.190Ursus_maritimus
ENSCSAG00000007125CPSF39287.382ENSVPAG00000008041CPSF310087.382Vicugna_pacos
ENSCSAG00000007125CPSF310091.667ENSVVUG00000002194CPSF310091.667Vulpes_vulpes
ENSCSAG00000007125CPSF39982.232ENSXETG00000008263cpsf39882.232Xenopus_tropicalis
ENSCSAG00000007125CPSF35075.786ENSXCOG00000000957-7475.786Xiphophorus_couchianus
ENSCSAG00000007125CPSF39977.126ENSXCOG00000019695cpsf39977.126Xiphophorus_couchianus
ENSCSAG00000007125CPSF39997.735ENSXMAG00000027291CPSF38597.735Xiphophorus_maculatus
ENSCSAG00000007125CPSF39976.833ENSXMAG00000009784cpsf39976.833Xiphophorus_maculatus

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