EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000007409 (Gene tree)
Gene ID: 103222209
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 20396 bases
Position: chr17:64586891-64607286
Accession: 103222209
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000003677	zf-U11-48K	PF05253.12	6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000005457	SNRNP48-201	3052	-	ENSCSAP00000003677	339 (aa)	XP_007971943	A0A0D9R4Y8

Gene Model

Click here to download ENSCSAG00000007409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000007409's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000007409	SNRNP48	100	98.820	ENSG00000168566	SNRNP48	100	98.820	Homo_sapiens
ENSCSAG00000007409	SNRNP48	81	47.703	ENSAPOG00000021430	snrnp48	85	47.297	Acanthochromis_polyacanthus
ENSCSAG00000007409	SNRNP48	99	89.337	ENSAMEG00000017349	SNRNP48	100	89.337	Ailuropoda_melanoleuca
ENSCSAG00000007409	SNRNP48	83	46.290	ENSACIG00000002032	snrnp48	82	46.290	Amphilophus_citrinellus
ENSCSAG00000007409	SNRNP48	81	47.703	ENSAOCG00000010562	snrnp48	96	42.693	Amphiprion_ocellaris
ENSCSAG00000007409	SNRNP48	81	48.043	ENSAPEG00000003231	snrnp48	96	42.899	Amphiprion_percula
ENSCSAG00000007409	SNRNP48	77	50.368	ENSATEG00000020210	snrnp48	81	50.000	Anabas_testudineus
ENSCSAG00000007409	SNRNP48	83	65.068	ENSACAG00000002811	SNRNP48	90	64.726	Anolis_carolinensis
ENSCSAG00000007409	SNRNP48	100	98.230	ENSANAG00000033538	SNRNP48	100	98.230	Aotus_nancymaae
ENSCSAG00000007409	SNRNP48	94	45.370	ENSAMXG00000015309	snrnp48	85	47.735	Astyanax_mexicanus
ENSCSAG00000007409	SNRNP48	100	86.176	ENSBTAG00000001123	SNRNP48	100	87.059	Bos_taurus
ENSCSAG00000007409	SNRNP48	100	97.640	ENSCJAG00000021330	SNRNP48	100	97.640	Callithrix_jacchus
ENSCSAG00000007409	SNRNP48	99	91.667	ENSCAFG00000009574	SNRNP48	83	91.691	Canis_familiaris
ENSCSAG00000007409	SNRNP48	99	91.988	ENSCAFG00020013203	SNRNP48	99	91.988	Canis_lupus_dingo
ENSCSAG00000007409	SNRNP48	100	87.647	ENSCHIG00000015216	SNRNP48	100	88.529	Capra_hircus
ENSCSAG00000007409	SNRNP48	100	93.215	ENSTSYG00000000698	SNRNP48	100	93.215	Carlito_syrichta
ENSCSAG00000007409	SNRNP48	91	88.312	ENSCAPG00000006768	SNRNP48	100	88.312	Cavia_aperea
ENSCSAG00000007409	SNRNP48	100	90.855	ENSCPOG00000007910	SNRNP48	100	90.855	Cavia_porcellus
ENSCSAG00000007409	SNRNP48	100	96.755	ENSCCAG00000035652	SNRNP48	100	96.755	Cebus_capucinus
ENSCSAG00000007409	SNRNP48	100	98.820	ENSCATG00000033947	SNRNP48	100	98.820	Cercocebus_atys
ENSCSAG00000007409	SNRNP48	100	90.560	ENSCLAG00000003765	SNRNP48	100	90.560	Chinchilla_lanigera
ENSCSAG00000007409	SNRNP48	85	63.158	ENSCPBG00000019146	SNRNP48	92	63.158	Chrysemys_picta_bellii
ENSCSAG00000007409	SNRNP48	94	30.031	ENSCING00000004121	-	70	32.787	Ciona_intestinalis
ENSCSAG00000007409	SNRNP48	100	99.410	ENSCANG00000030017	SNRNP48	100	99.410	Colobus_angolensis_palliatus
ENSCSAG00000007409	SNRNP48	99	69.552	ENSCGRG00001008805	-	95	68.955	Cricetulus_griseus_chok1gshd
ENSCSAG00000007409	SNRNP48	100	88.496	ENSCGRG00001001076	-	100	87.611	Cricetulus_griseus_chok1gshd
ENSCSAG00000007409	SNRNP48	100	88.496	ENSCGRG00000007781	Snrnp48	100	87.611	Cricetulus_griseus_crigri
ENSCSAG00000007409	SNRNP48	76	50.192	ENSCSEG00000000722	snrnp48	72	50.192	Cynoglossus_semilaevis
ENSCSAG00000007409	SNRNP48	89	46.326	ENSCVAG00000019829	snrnp48	73	47.569	Cyprinodon_variegatus
ENSCSAG00000007409	SNRNP48	81	46.853	ENSDARG00000039989	snrnp48	83	46.575	Danio_rerio
ENSCSAG00000007409	SNRNP48	100	91.176	ENSDNOG00000014978	SNRNP48	100	91.176	Dasypus_novemcinctus
ENSCSAG00000007409	SNRNP48	99	88.791	ENSDORG00000015140	Snrnp48	100	88.529	Dipodomys_ordii
ENSCSAG00000007409	SNRNP48	99	92.604	ENSEASG00005012021	SNRNP48	100	92.330	Equus_asinus_asinus
ENSCSAG00000007409	SNRNP48	100	93.215	ENSECAG00000026937	SNRNP48	100	93.215	Equus_caballus
ENSCSAG00000007409	SNRNP48	100	70.588	ENSEEUG00000015437	SNRNP48	99	70.294	Erinaceus_europaeus
ENSCSAG00000007409	SNRNP48	87	47.020	ENSELUG00000009766	snrnp48	77	48.214	Esox_lucius
ENSCSAG00000007409	SNRNP48	100	93.510	ENSFCAG00000018853	SNRNP48	100	93.510	Felis_catus
ENSCSAG00000007409	SNRNP48	83	66.781	ENSFALG00000007797	SNRNP48	93	66.327	Ficedula_albicollis
ENSCSAG00000007409	SNRNP48	99	90.533	ENSFDAG00000009231	SNRNP48	100	90.265	Fukomys_damarensis
ENSCSAG00000007409	SNRNP48	59	56.931	ENSFHEG00000014647	snrnp48	97	46.465	Fundulus_heteroclitus
ENSCSAG00000007409	SNRNP48	73	47.581	ENSGMOG00000018599	-	86	45.583	Gadus_morhua
ENSCSAG00000007409	SNRNP48	78	67.148	ENSGALG00000013005	SNRNP48	85	67.984	Gallus_gallus
ENSCSAG00000007409	SNRNP48	82	48.592	ENSGAFG00000021639	snrnp48	81	44.109	Gambusia_affinis
ENSCSAG00000007409	SNRNP48	71	51.240	ENSGACG00000017756	-	84	48.432	Gasterosteus_aculeatus
ENSCSAG00000007409	SNRNP48	84	62.583	ENSGAGG00000000865	SNRNP48	97	62.583	Gopherus_agassizii
ENSCSAG00000007409	SNRNP48	100	98.820	ENSGGOG00000013220	SNRNP48	100	98.820	Gorilla_gorilla
ENSCSAG00000007409	SNRNP48	76	47.893	ENSHBUG00000017066	snrnp48	83	45.918	Haplochromis_burtoni
ENSCSAG00000007409	SNRNP48	99	91.716	ENSHGLG00000015241	SNRNP48	100	91.445	Heterocephalus_glaber_female
ENSCSAG00000007409	SNRNP48	99	91.716	ENSHGLG00100010027	SNRNP48	100	91.445	Heterocephalus_glaber_male
ENSCSAG00000007409	SNRNP48	72	47.967	ENSHCOG00000014066	snrnp48	81	45.833	Hippocampus_comes
ENSCSAG00000007409	SNRNP48	100	94.395	ENSSTOG00000014635	SNRNP48	100	97.000	Ictidomys_tridecemlineatus
ENSCSAG00000007409	SNRNP48	100	85.251	ENSJJAG00000011495	Snrnp48	100	85.251	Jaculus_jaculus
ENSCSAG00000007409	SNRNP48	90	44.625	ENSKMAG00000016514	snrnp48	80	46.975	Kryptolebias_marmoratus
ENSCSAG00000007409	SNRNP48	76	49.421	ENSLBEG00000026249	snrnp48	95	43.314	Labrus_bergylta
ENSCSAG00000007409	SNRNP48	96	54.192	ENSLACG00000003958	SNRNP48	98	53.061	Latimeria_chalumnae
ENSCSAG00000007409	SNRNP48	83	51.211	ENSLOCG00000004187	snrnp48	95	48.665	Lepisosteus_oculatus
ENSCSAG00000007409	SNRNP48	100	89.086	ENSLAFG00000011152	SNRNP48	100	89.086	Loxodonta_africana
ENSCSAG00000007409	SNRNP48	100	99.705	ENSMFAG00000045216	SNRNP48	100	99.705	Macaca_fascicularis
ENSCSAG00000007409	SNRNP48	100	99.705	ENSMMUG00000014785	SNRNP48	100	99.705	Macaca_mulatta
ENSCSAG00000007409	SNRNP48	100	99.410	ENSMNEG00000042269	SNRNP48	100	99.410	Macaca_nemestrina
ENSCSAG00000007409	SNRNP48	100	99.705	ENSMLEG00000034004	SNRNP48	100	99.705	Mandrillus_leucophaeus
ENSCSAG00000007409	SNRNP48	76	48.077	ENSMAMG00000018673	snrnp48	71	47.687	Mastacembelus_armatus
ENSCSAG00000007409	SNRNP48	83	65.986	ENSMGAG00000006037	SNRNP48	99	65.753	Meleagris_gallopavo
ENSCSAG00000007409	SNRNP48	100	89.086	ENSMAUG00000011944	Snrnp48	100	88.201	Mesocricetus_auratus
ENSCSAG00000007409	SNRNP48	100	92.330	ENSMICG00000012497	SNRNP48	100	92.330	Microcebus_murinus
ENSCSAG00000007409	SNRNP48	100	88.791	ENSMOCG00000015555	Snrnp48	100	87.906	Microtus_ochrogaster
ENSCSAG00000007409	SNRNP48	54	52.973	ENSMMOG00000003072	-	58	52.973	Mola_mola
ENSCSAG00000007409	SNRNP48	98	70.640	ENSMODG00000009996	SNRNP48	93	70.640	Monodelphis_domestica
ENSCSAG00000007409	SNRNP48	74	50.000	ENSMALG00000005725	snrnp48	80	47.687	Monopterus_albus
ENSCSAG00000007409	SNRNP48	100	87.611	MGP_CAROLIEiJ_G0018441	Snrnp48	100	86.726	Mus_caroli
ENSCSAG00000007409	SNRNP48	100	86.726	ENSMUSG00000021431	Snrnp48	100	85.841	Mus_musculus
ENSCSAG00000007409	SNRNP48	100	87.021	MGP_PahariEiJ_G0019509	Snrnp48	100	86.136	Mus_pahari
ENSCSAG00000007409	SNRNP48	100	86.136	MGP_SPRETEiJ_G0019321	Snrnp48	100	85.251	Mus_spretus
ENSCSAG00000007409	SNRNP48	99	87.574	ENSNGAG00000004849	Snrnp48	99	87.574	Nannospalax_galili
ENSCSAG00000007409	SNRNP48	76	47.510	ENSNBRG00000012127	snrnp48	84	45.578	Neolamprologus_brichardi
ENSCSAG00000007409	SNRNP48	100	99.115	ENSNLEG00000011667	SNRNP48	100	99.115	Nomascus_leucogenys
ENSCSAG00000007409	SNRNP48	95	78.328	ENSOPRG00000015471	SNRNP48	100	78.328	Ochotona_princeps
ENSCSAG00000007409	SNRNP48	74	48.047	ENSONIG00000001520	snrnp48	82	46.021	Oreochromis_niloticus
ENSCSAG00000007409	SNRNP48	57	62.981	ENSOANG00000019888	-	100	63.942	Ornithorhynchus_anatinus
ENSCSAG00000007409	SNRNP48	84	90.909	ENSOCUG00000005168	SNRNP48	100	90.461	Oryctolagus_cuniculus
ENSCSAG00000007409	SNRNP48	88	46.753	ENSORLG00000015654	snrnp48	82	47.586	Oryzias_latipes
ENSCSAG00000007409	SNRNP48	88	45.779	ENSORLG00020015976	snrnp48	70	46.897	Oryzias_latipes_hni
ENSCSAG00000007409	SNRNP48	88	46.753	ENSORLG00015022379	snrnp48	71	47.931	Oryzias_latipes_hsok
ENSCSAG00000007409	SNRNP48	83	47.569	ENSOMEG00000022007	snrnp48	82	48.264	Oryzias_melastigma
ENSCSAG00000007409	SNRNP48	92	92.605	ENSOGAG00000005275	SNRNP48	96	92.744	Otolemur_garnettii
ENSCSAG00000007409	SNRNP48	85	87.805	ENSOARG00000017319	SNRNP48	100	87.805	Ovis_aries
ENSCSAG00000007409	SNRNP48	100	99.115	ENSPPAG00000032873	SNRNP48	100	99.115	Pan_paniscus
ENSCSAG00000007409	SNRNP48	100	93.805	ENSPPRG00000004283	SNRNP48	100	93.805	Panthera_pardus
ENSCSAG00000007409	SNRNP48	85	94.425	ENSPTIG00000013502	SNRNP48	100	94.425	Panthera_tigris_altaica
ENSCSAG00000007409	SNRNP48	100	99.115	ENSPTRG00000017703	SNRNP48	100	99.115	Pan_troglodytes
ENSCSAG00000007409	SNRNP48	100	99.705	ENSPANG00000000771	SNRNP48	100	99.705	Papio_anubis
ENSCSAG00000007409	SNRNP48	94	45.797	ENSPKIG00000013703	snrnp48	70	45.238	Paramormyrops_kingsleyae
ENSCSAG00000007409	SNRNP48	84	62.126	ENSPSIG00000002213	SNRNP48	94	61.204	Pelodiscus_sinensis
ENSCSAG00000007409	SNRNP48	72	48.980	ENSPMGG00000008120	snrnp48	86	48.980	Periophthalmus_magnuspinnatus
ENSCSAG00000007409	SNRNP48	100	89.086	ENSPEMG00000008872	Snrnp48	100	89.691	Peromyscus_maniculatus_bairdii
ENSCSAG00000007409	SNRNP48	73	52.590	ENSPFOG00000003578	snrnp48	81	45.399	Poecilia_formosa
ENSCSAG00000007409	SNRNP48	67	51.965	ENSPLAG00000002290	snrnp48	77	51.965	Poecilia_latipinna
ENSCSAG00000007409	SNRNP48	73	51.793	ENSPMEG00000018033	snrnp48	81	44.785	Poecilia_mexicana
ENSCSAG00000007409	SNRNP48	72	52.033	ENSPREG00000018541	snrnp48	80	49.291	Poecilia_reticulata
ENSCSAG00000007409	SNRNP48	100	97.640	ENSPPYG00000016209	SNRNP48	100	97.640	Pongo_abelii
ENSCSAG00000007409	SNRNP48	79	70.787	ENSPCAG00000011991	SNRNP48	99	70.787	Procavia_capensis
ENSCSAG00000007409	SNRNP48	100	91.150	ENSPVAG00000002854	SNRNP48	100	91.150	Pteropus_vampyrus
ENSCSAG00000007409	SNRNP48	76	48.276	ENSPNYG00000015399	snrnp48	92	46.259	Pundamilia_nyererei
ENSCSAG00000007409	SNRNP48	100	87.906	ENSRNOG00000013756	Snrnp48	100	87.021	Rattus_norvegicus
ENSCSAG00000007409	SNRNP48	91	99.032	ENSRBIG00000043856	SNRNP48	98	99.032	Rhinopithecus_bieti
ENSCSAG00000007409	SNRNP48	100	99.410	ENSRROG00000043229	SNRNP48	100	99.410	Rhinopithecus_roxellana
ENSCSAG00000007409	SNRNP48	100	98.230	ENSSBOG00000019486	SNRNP48	100	98.230	Saimiri_boliviensis_boliviensis
ENSCSAG00000007409	SNRNP48	98	71.512	ENSSHAG00000014483	SNRNP48	99	71.512	Sarcophilus_harrisii
ENSCSAG00000007409	SNRNP48	73	52.174	ENSSFOG00015006610	snrnp48	69	50.000	Scleropages_formosus
ENSCSAG00000007409	SNRNP48	87	46.801	ENSSDUG00000014953	snrnp48	95	43.353	Seriola_dumerili
ENSCSAG00000007409	SNRNP48	83	47.797	ENSSLDG00000005989	snrnp48	97	42.938	Seriola_lalandi_dorsalis
ENSCSAG00000007409	SNRNP48	84	64.765	ENSSPUG00000006257	SNRNP48	85	64.765	Sphenodon_punctatus
ENSCSAG00000007409	SNRNP48	78	48.905	ENSSPAG00000006454	snrnp48	80	48.571	Stegastes_partitus
ENSCSAG00000007409	SNRNP48	83	64.948	ENSTGUG00000007575	SNRNP48	93	64.948	Taeniopygia_guttata
ENSCSAG00000007409	SNRNP48	92	42.722	ENSTRUG00000007031	snrnp48	93	43.963	Takifugu_rubripes
ENSCSAG00000007409	SNRNP48	76	45.769	ENSTNIG00000012977	-	72	47.131	Tetraodon_nigroviridis
ENSCSAG00000007409	SNRNP48	100	74.336	ENSTBEG00000015620	SNRNP48	100	74.336	Tupaia_belangeri
ENSCSAG00000007409	SNRNP48	100	90.265	ENSTTRG00000016715	SNRNP48	100	90.265	Tursiops_truncatus
ENSCSAG00000007409	SNRNP48	100	92.330	ENSUAMG00000003690	SNRNP48	100	92.330	Ursus_americanus
ENSCSAG00000007409	SNRNP48	85	87.456	ENSVPAG00000003557	SNRNP48	100	87.456	Vicugna_pacos
ENSCSAG00000007409	SNRNP48	99	91.691	ENSVVUG00000004996	SNRNP48	99	91.691	Vulpes_vulpes
ENSCSAG00000007409	SNRNP48	89	51.911	ENSXETG00000020447	snrnp48	99	49.153	Xenopus_tropicalis
ENSCSAG00000007409	SNRNP48	67	51.739	ENSXCOG00000004478	snrnp48	69	51.739	Xiphophorus_couchianus
ENSCSAG00000007409	SNRNP48	82	50.179	ENSXMAG00000013595	snrnp48	81	45.399	Xiphophorus_maculatus