EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000008121 (Gene tree)
Gene ID: 103224630
Gene Symbol: SF3B2
Alias: Cus1|SAP145|SF3b1|SF3b145
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 17575 bases
Position: chr1:8189446-8207020
Accession: 103224630
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000004384	DUF382	PF04037.13	7.8e-60	1	1
ENSCSAP00000004384	SAP	PF02037.27	1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000006176	SF3B2-201	3070	XM_007978348	ENSCSAP00000004384	895 (aa)	XP_007976539	A0A0D9R6Z5

Gene Model

Click here to download ENSCSAG00000008121's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000008121's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000008121	SF3B2	100	99.888	ENSG00000087365	SF3B2	100	100.000	Homo_sapiens
ENSCSAG00000008121	SF3B2	95	69.884	ENSAPOG00000001974	sf3b2	82	74.394	Acanthochromis_polyacanthus
ENSCSAG00000008121	SF3B2	100	98.111	ENSAMEG00000017206	SF3B2	100	98.111	Ailuropoda_melanoleuca
ENSCSAG00000008121	SF3B2	86	71.611	ENSACIG00000000624	sf3b2	87	73.602	Amphilophus_citrinellus
ENSCSAG00000008121	SF3B2	97	70.635	ENSAOCG00000009207	sf3b2	86	75.065	Amphiprion_ocellaris
ENSCSAG00000008121	SF3B2	97	70.225	ENSAPEG00000002762	sf3b2	87	73.205	Amphiprion_percula
ENSCSAG00000008121	SF3B2	100	65.752	ENSACAG00000008615	SF3B2	100	66.150	Anolis_carolinensis
ENSCSAG00000008121	SF3B2	100	99.219	ENSANAG00000029120	SF3B2	100	99.219	Aotus_nancymaae
ENSCSAG00000008121	SF3B2	86	73.032	ENSACLG00000014771	sf3b2	87	74.708	Astatotilapia_calliptera
ENSCSAG00000008121	SF3B2	84	71.279	ENSAMXG00000007929	sf3b2	86	77.237	Astyanax_mexicanus
ENSCSAG00000008121	SF3B2	100	97.219	ENSBTAG00000002778	SF3B2	100	97.219	Bos_taurus
ENSCSAG00000008121	SF3B2	59	50.532	WBGene00021004	sftb-2	89	51.825	Caenorhabditis_elegans
ENSCSAG00000008121	SF3B2	100	99.442	ENSCJAG00000001656	SF3B2	100	99.442	Callithrix_jacchus
ENSCSAG00000008121	SF3B2	100	98.218	ENSCAFG00000013033	SF3B2	100	98.218	Canis_familiaris
ENSCSAG00000008121	SF3B2	100	98.218	ENSCAFG00020015382	SF3B2	100	98.218	Canis_lupus_dingo
ENSCSAG00000008121	SF3B2	100	97.327	ENSCHIG00000011211	SF3B2	100	97.327	Capra_hircus
ENSCSAG00000008121	SF3B2	100	98.994	ENSTSYG00000000959	SF3B2	100	98.994	Carlito_syrichta
ENSCSAG00000008121	SF3B2	62	83.929	ENSCAPG00000006065	SF3B2	93	100.000	Cavia_aperea
ENSCSAG00000008121	SF3B2	91	95.203	ENSCPOG00000008294	SF3B2	100	95.203	Cavia_porcellus
ENSCSAG00000008121	SF3B2	100	99.442	ENSCCAG00000035256	SF3B2	100	99.442	Cebus_capucinus
ENSCSAG00000008121	SF3B2	100	100.000	ENSCATG00000042240	SF3B2	100	100.000	Cercocebus_atys
ENSCSAG00000008121	SF3B2	100	96.313	ENSCLAG00000016852	SF3B2	100	96.313	Chinchilla_lanigera
ENSCSAG00000008121	SF3B2	91	99.485	ENSCHOG00000001476	SF3B2	77	91.237	Choloepus_hoffmanni
ENSCSAG00000008121	SF3B2	85	81.641	ENSCPBG00000022465	SF3B2	87	88.401	Chrysemys_picta_bellii
ENSCSAG00000008121	SF3B2	72	60.429	ENSCING00000005665	-	99	60.063	Ciona_intestinalis
ENSCSAG00000008121	SF3B2	70	60.440	ENSCSAVG00000002029	-	99	59.779	Ciona_savignyi
ENSCSAG00000008121	SF3B2	100	100.000	ENSCANG00000039680	SF3B2	100	100.000	Colobus_angolensis_palliatus
ENSCSAG00000008121	SF3B2	100	96.201	ENSCGRG00001015741	Sf3b2	100	96.201	Cricetulus_griseus_chok1gshd
ENSCSAG00000008121	SF3B2	100	96.201	ENSCGRG00000018110	Sf3b2	100	96.201	Cricetulus_griseus_crigri
ENSCSAG00000008121	SF3B2	74	75.150	ENSCSEG00000000230	sf3b2	78	77.129	Cynoglossus_semilaevis
ENSCSAG00000008121	SF3B2	97	67.845	ENSCVAG00000003357	sf3b2	85	73.506	Cyprinodon_variegatus
ENSCSAG00000008121	SF3B2	80	73.481	ENSDARG00000018049	sf3b2	86	74.145	Danio_rerio
ENSCSAG00000008121	SF3B2	91	94.975	ENSDNOG00000009484	SF3B2	100	96.102	Dasypus_novemcinctus
ENSCSAG00000008121	SF3B2	100	95.759	ENSDORG00000002495	Sf3b2	100	95.759	Dipodomys_ordii
ENSCSAG00000008121	SF3B2	84	88.889	ENSETEG00000020284	SF3B2	85	88.759	Echinops_telfairi
ENSCSAG00000008121	SF3B2	98	58.900	ENSEBUG00000013703	sf3b2	99	60.174	Eptatretus_burgeri
ENSCSAG00000008121	SF3B2	100	98.109	ENSEASG00005004508	SF3B2	100	98.109	Equus_asinus_asinus
ENSCSAG00000008121	SF3B2	100	98.109	ENSECAG00000024461	SF3B2	100	98.109	Equus_caballus
ENSCSAG00000008121	SF3B2	61	100.000	ENSEEUG00000014278	-	60	100.000	Erinaceus_europaeus
ENSCSAG00000008121	SF3B2	97	66.848	ENSELUG00000005586	sf3b2	86	71.499	Esox_lucius
ENSCSAG00000008121	SF3B2	100	98.330	ENSFCAG00000013289	SF3B2	100	98.330	Felis_catus
ENSCSAG00000008121	SF3B2	79	69.873	ENSFALG00000014653	SF3B2	98	69.014	Ficedula_albicollis
ENSCSAG00000008121	SF3B2	100	97.667	ENSFDAG00000019806	SF3B2	100	97.667	Fukomys_damarensis
ENSCSAG00000008121	SF3B2	85	70.581	ENSFHEG00000020968	sf3b2	86	72.000	Fundulus_heteroclitus
ENSCSAG00000008121	SF3B2	72	78.049	ENSGMOG00000012131	sf3b2	96	80.975	Gadus_morhua
ENSCSAG00000008121	SF3B2	97	67.637	ENSGAFG00000001675	sf3b2	86	71.871	Gambusia_affinis
ENSCSAG00000008121	SF3B2	72	79.077	ENSGACG00000019012	sf3b2	96	80.159	Gasterosteus_aculeatus
ENSCSAG00000008121	SF3B2	100	77.133	ENSGAGG00000023916	SF3B2	86	84.162	Gopherus_agassizii
ENSCSAG00000008121	SF3B2	100	99.888	ENSGGOG00000028448	SF3B2	100	99.888	Gorilla_gorilla
ENSCSAG00000008121	SF3B2	86	73.161	ENSHBUG00000017349	sf3b2	87	74.708	Haplochromis_burtoni
ENSCSAG00000008121	SF3B2	100	96.201	ENSHGLG00000010807	SF3B2	100	96.201	Heterocephalus_glaber_female
ENSCSAG00000008121	SF3B2	100	98.101	ENSHGLG00100006361	SF3B2	100	98.101	Heterocephalus_glaber_male
ENSCSAG00000008121	SF3B2	97	65.795	ENSHCOG00000016203	sf3b2	87	71.056	Hippocampus_comes
ENSCSAG00000008121	SF3B2	97	65.184	ENSIPUG00000009383	sf3b2	85	71.748	Ictalurus_punctatus
ENSCSAG00000008121	SF3B2	100	98.547	ENSSTOG00000028892	SF3B2	100	98.547	Ictidomys_tridecemlineatus
ENSCSAG00000008121	SF3B2	100	96.214	ENSJJAG00000018193	Sf3b2	100	96.214	Jaculus_jaculus
ENSCSAG00000008121	SF3B2	59	87.970	ENSKMAG00000020181	sf3b2	84	74.079	Kryptolebias_marmoratus
ENSCSAG00000008121	SF3B2	97	68.652	ENSLBEG00000027739	sf3b2	88	78.268	Labrus_bergylta
ENSCSAG00000008121	SF3B2	71	81.250	ENSLACG00000010429	SF3B2	86	75.194	Latimeria_chalumnae
ENSCSAG00000008121	SF3B2	100	95.880	ENSLAFG00000002128	SF3B2	100	95.880	Loxodonta_africana
ENSCSAG00000008121	SF3B2	100	99.888	ENSMFAG00000003064	SF3B2	100	99.888	Macaca_fascicularis
ENSCSAG00000008121	SF3B2	100	95.531	ENSMMUG00000011743	SF3B2	100	95.531	Macaca_mulatta
ENSCSAG00000008121	SF3B2	100	99.888	ENSMNEG00000034437	SF3B2	100	99.888	Macaca_nemestrina
ENSCSAG00000008121	SF3B2	100	99.777	ENSMLEG00000029373	SF3B2	100	99.777	Mandrillus_leucophaeus
ENSCSAG00000008121	SF3B2	84	74.871	ENSMAMG00000014103	sf3b2	86	75.000	Mastacembelus_armatus
ENSCSAG00000008121	SF3B2	86	73.032	ENSMZEG00005020789	sf3b2	86	74.708	Maylandia_zebra
ENSCSAG00000008121	SF3B2	65	98.333	ENSMAUG00000017040	Sf3b2	100	98.333	Mesocricetus_auratus
ENSCSAG00000008121	SF3B2	100	94.649	ENSMICG00000016942	-	97	94.649	Microcebus_murinus
ENSCSAG00000008121	SF3B2	100	98.436	ENSMICG00000008565	-	100	98.436	Microcebus_murinus
ENSCSAG00000008121	SF3B2	100	96.089	ENSMOCG00000003136	Sf3b2	100	96.089	Microtus_ochrogaster
ENSCSAG00000008121	SF3B2	71	88.346	ENSMODG00000025020	-	99	87.402	Monodelphis_domestica
ENSCSAG00000008121	SF3B2	85	90.352	ENSMODG00000008490	-	92	92.167	Monodelphis_domestica
ENSCSAG00000008121	SF3B2	81	71.837	ENSMALG00000015137	sf3b2	84	73.297	Monopterus_albus
ENSCSAG00000008121	SF3B2	100	95.196	MGP_CAROLIEiJ_G0022539	Sf3b2	100	95.196	Mus_caroli
ENSCSAG00000008121	SF3B2	100	95.978	ENSMUSG00000024853	Sf3b2	100	95.978	Mus_musculus
ENSCSAG00000008121	SF3B2	100	95.978	MGP_PahariEiJ_G0014036	Sf3b2	100	95.978	Mus_pahari
ENSCSAG00000008121	SF3B2	100	95.866	MGP_SPRETEiJ_G0023453	Sf3b2	100	95.866	Mus_spretus
ENSCSAG00000008121	SF3B2	100	98.107	ENSMPUG00000011349	SF3B2	100	98.107	Mustela_putorius_furo
ENSCSAG00000008121	SF3B2	100	96.997	ENSMLUG00000011136	SF3B2	100	96.997	Myotis_lucifugus
ENSCSAG00000008121	SF3B2	100	96.201	ENSNGAG00000012103	Sf3b2	100	96.201	Nannospalax_galili
ENSCSAG00000008121	SF3B2	100	94.469	ENSNLEG00000006007	SF3B2	100	94.469	Nomascus_leucogenys
ENSCSAG00000008121	SF3B2	77	93.466	ENSMEUG00000000019	SF3B2	80	93.466	Notamacropus_eugenii
ENSCSAG00000008121	SF3B2	100	92.514	ENSODEG00000017764	SF3B2	100	92.514	Octodon_degus
ENSCSAG00000008121	SF3B2	97	67.640	ENSONIG00000013068	sf3b2	87	74.098	Oreochromis_niloticus
ENSCSAG00000008121	SF3B2	87	79.899	ENSOANG00000012482	SF3B2	97	80.052	Ornithorhynchus_anatinus
ENSCSAG00000008121	SF3B2	62	63.978	ENSOCUG00000024154	-	95	67.184	Oryctolagus_cuniculus
ENSCSAG00000008121	SF3B2	100	92.961	ENSOCUG00000015722	-	100	92.961	Oryctolagus_cuniculus
ENSCSAG00000008121	SF3B2	97	67.455	ENSORLG00000008235	sf3b2	85	74.607	Oryzias_latipes
ENSCSAG00000008121	SF3B2	97	67.455	ENSORLG00020005357	sf3b2	88	74.607	Oryzias_latipes_hni
ENSCSAG00000008121	SF3B2	97	67.568	ENSORLG00015022454	sf3b2	82	78.323	Oryzias_latipes_hsok
ENSCSAG00000008121	SF3B2	100	92.514	ENSOGAG00000005799	SF3B2	100	93.073	Otolemur_garnettii
ENSCSAG00000008121	SF3B2	100	92.231	ENSOARG00000002125	SF3B2	100	98.103	Ovis_aries
ENSCSAG00000008121	SF3B2	100	99.888	ENSPPAG00000007359	SF3B2	100	99.888	Pan_paniscus
ENSCSAG00000008121	SF3B2	100	98.330	ENSPPRG00000013334	SF3B2	100	98.330	Panthera_pardus
ENSCSAG00000008121	SF3B2	100	98.218	ENSPTIG00000015022	SF3B2	100	98.218	Panthera_tigris_altaica
ENSCSAG00000008121	SF3B2	100	99.888	ENSPTRG00000003912	SF3B2	100	99.888	Pan_troglodytes
ENSCSAG00000008121	SF3B2	100	100.000	ENSPANG00000008593	SF3B2	100	100.000	Papio_anubis
ENSCSAG00000008121	SF3B2	97	67.893	ENSPKIG00000016576	sf3b2	86	81.359	Paramormyrops_kingsleyae
ENSCSAG00000008121	SF3B2	84	88.655	ENSPSIG00000003158	SF3B2	100	88.493	Pelodiscus_sinensis
ENSCSAG00000008121	SF3B2	84	67.937	ENSPMGG00000000819	sf3b2	86	67.759	Periophthalmus_magnuspinnatus
ENSCSAG00000008121	SF3B2	100	96.313	ENSPEMG00000015437	Sf3b2	100	96.313	Peromyscus_maniculatus_bairdii
ENSCSAG00000008121	SF3B2	93	81.851	ENSPEMG00000015451	-	100	81.753	Peromyscus_maniculatus_bairdii
ENSCSAG00000008121	SF3B2	85	89.687	ENSPCIG00000008381	SF3B2	100	87.171	Phascolarctos_cinereus
ENSCSAG00000008121	SF3B2	97	67.825	ENSPFOG00000002552	sf3b2	86	71.613	Poecilia_formosa
ENSCSAG00000008121	SF3B2	97	67.825	ENSPLAG00000001471	sf3b2	86	71.742	Poecilia_latipinna
ENSCSAG00000008121	SF3B2	97	66.667	ENSPMEG00000013180	sf3b2	86	72.903	Poecilia_mexicana
ENSCSAG00000008121	SF3B2	85	71.151	ENSPREG00000002665	sf3b2	86	72.716	Poecilia_reticulata
ENSCSAG00000008121	SF3B2	75	98.361	ENSPPYG00000003034	-	99	98.361	Pongo_abelii
ENSCSAG00000008121	SF3B2	100	97.327	ENSPCAG00000005129	SF3B2	100	97.327	Procavia_capensis
ENSCSAG00000008121	SF3B2	100	98.994	ENSPCOG00000025375	SF3B2	100	98.994	Propithecus_coquereli
ENSCSAG00000008121	SF3B2	60	99.561	ENSPVAG00000005466	-	88	99.561	Pteropus_vampyrus
ENSCSAG00000008121	SF3B2	55	99.299	ENSPVAG00000016975	-	55	99.299	Pteropus_vampyrus
ENSCSAG00000008121	SF3B2	80	73.481	ENSPNYG00000023594	sf3b2	92	73.735	Pundamilia_nyererei
ENSCSAG00000008121	SF3B2	86	71.808	ENSPNAG00000001891	sf3b2	86	73.214	Pygocentrus_nattereri
ENSCSAG00000008121	SF3B2	100	96.201	ENSRNOG00000020412	Sf3b2	100	96.201	Rattus_norvegicus
ENSCSAG00000008121	SF3B2	100	99.888	ENSRBIG00000034065	SF3B2	100	99.888	Rhinopithecus_bieti
ENSCSAG00000008121	SF3B2	100	99.888	ENSRROG00000034496	SF3B2	100	99.888	Rhinopithecus_roxellana
ENSCSAG00000008121	SF3B2	100	95.033	ENSSBOG00000026337	SF3B2	100	93.819	Saimiri_boliviensis_boliviensis
ENSCSAG00000008121	SF3B2	85	86.162	ENSSHAG00000010933	-	84	86.815	Sarcophilus_harrisii
ENSCSAG00000008121	SF3B2	96	68.729	ENSSHAG00000018043	-	100	68.922	Sarcophilus_harrisii
ENSCSAG00000008121	SF3B2	97	68.404	ENSSFOG00015021125	sf3b2	86	74.708	Scleropages_formosus
ENSCSAG00000008121	SF3B2	59	87.666	ENSSMAG00000004079	sf3b2	88	75.065	Scophthalmus_maximus
ENSCSAG00000008121	SF3B2	59	88.425	ENSSDUG00000008499	sf3b2	85	71.484	Seriola_dumerili
ENSCSAG00000008121	SF3B2	59	88.425	ENSSLDG00000006838	sf3b2	86	74.808	Seriola_lalandi_dorsalis
ENSCSAG00000008121	SF3B2	53	99.206	ENSSARG00000003707	-	53	99.206	Sorex_araneus
ENSCSAG00000008121	SF3B2	100	78.564	ENSSPUG00000009198	SF3B2	85	82.682	Sphenodon_punctatus
ENSCSAG00000008121	SF3B2	97	68.182	ENSSPAG00000004406	sf3b2	86	75.032	Stegastes_partitus
ENSCSAG00000008121	SF3B2	100	97.327	ENSSSCG00000012957	SF3B2	100	97.327	Sus_scrofa
ENSCSAG00000008121	SF3B2	97	56.328	ENSTRUG00000007611	sf3b2	88	71.763	Takifugu_rubripes
ENSCSAG00000008121	SF3B2	86	68.798	ENSTNIG00000007441	sf3b2	85	70.889	Tetraodon_nigroviridis
ENSCSAG00000008121	SF3B2	89	93.023	ENSTBEG00000004258	SF3B2	82	99.286	Tupaia_belangeri
ENSCSAG00000008121	SF3B2	100	97.661	ENSTTRG00000014339	SF3B2	100	97.661	Tursiops_truncatus
ENSCSAG00000008121	SF3B2	100	96.329	ENSUAMG00000020754	SF3B2	99	97.680	Ursus_americanus
ENSCSAG00000008121	SF3B2	100	98.330	ENSUMAG00000010994	SF3B2	100	98.330	Ursus_maritimus
ENSCSAG00000008121	SF3B2	67	99.153	ENSVPAG00000008695	SF3B2	63	99.153	Vicugna_pacos
ENSCSAG00000008121	SF3B2	100	98.107	ENSVVUG00000027029	SF3B2	100	98.107	Vulpes_vulpes
ENSCSAG00000008121	SF3B2	87	70.581	ENSXETG00000008422	sf3b2	87	78.540	Xenopus_tropicalis
ENSCSAG00000008121	SF3B2	70	78.571	ENSXCOG00000008943	sf3b2	84	78.095	Xiphophorus_couchianus
ENSCSAG00000008121	SF3B2	59	87.736	ENSXMAG00000008467	sf3b2	86	71.245	Xiphophorus_maculatus