EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000008460 (Gene tree)
Gene ID: 103232533
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 77610 bases
Position: chrX:104690689-104768298
Accession: 103232533
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000004716	ResIII	PF04851.15	3.6e-12	1	1
ENSCSAP00000004716	DEAD	PF00270.29	6.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000006510	SMARCA1-201	4210	XM_007992644	ENSCSAP00000004716	1058 (aa)	XP_007990835	A0A0D9R7X7

Gene Model

Click here to download ENSCSAG00000008460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000008460's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000008460	SMARCA1	92	85.685	ENSCSAG00000003448	SMARCA5	99	85.685
ENSCSAG00000008460	SMARCA1	53	43.937	ENSCSAG00000018386	CHD1L	61	43.937
ENSCSAG00000008460	SMARCA1	50	48.207	ENSCSAG00000006181	HELLS	77	48.207

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000008460	SMARCA1	100	99.905	ENSG00000102038	SMARCA1	100	99.905	Homo_sapiens
ENSCSAG00000008460	SMARCA1	92	83.709	ENSAPOG00000016035	smarca5	98	84.026	Acanthochromis_polyacanthus
ENSCSAG00000008460	SMARCA1	100	96.729	ENSAMEG00000015218	SMARCA1	100	96.729	Ailuropoda_melanoleuca
ENSCSAG00000008460	SMARCA1	85	84.053	ENSACIG00000016982	smarca5	99	84.152	Amphilophus_citrinellus
ENSCSAG00000008460	SMARCA1	92	83.709	ENSAOCG00000015578	smarca5	95	82.762	Amphiprion_ocellaris
ENSCSAG00000008460	SMARCA1	92	83.709	ENSAPEG00000011117	smarca5	99	84.080	Amphiprion_percula
ENSCSAG00000008460	SMARCA1	93	83.299	ENSATEG00000012894	smarca5	94	83.714	Anabas_testudineus
ENSCSAG00000008460	SMARCA1	93	93.279	ENSAPLG00000013149	SMARCA1	100	93.279	Anas_platyrhynchos
ENSCSAG00000008460	SMARCA1	97	89.612	ENSACAG00000011376	SMARCA1	95	91.491	Anolis_carolinensis
ENSCSAG00000008460	SMARCA1	100	94.707	ENSANAG00000023098	SMARCA1	100	94.707	Aotus_nancymaae
ENSCSAG00000008460	SMARCA1	96	81.158	ENSACLG00000025356	smarca5	95	83.165	Astatotilapia_calliptera
ENSCSAG00000008460	SMARCA1	98	80.754	ENSAMXG00000005709	smarca5	94	84.000	Astyanax_mexicanus
ENSCSAG00000008460	SMARCA1	88	88.495	ENSAMXG00000011227	smarca1	99	90.182	Astyanax_mexicanus
ENSCSAG00000008460	SMARCA1	99	97.356	ENSBTAG00000002292	SMARCA1	99	96.286	Bos_taurus
ENSCSAG00000008460	SMARCA1	93	63.673	WBGene00002169	isw-1	97	63.673	Caenorhabditis_elegans
ENSCSAG00000008460	SMARCA1	100	99.622	ENSCJAG00000002868	SMARCA1	100	99.622	Callithrix_jacchus
ENSCSAG00000008460	SMARCA1	100	88.558	ENSCAFG00000018673	SMARCA1	99	88.824	Canis_familiaris
ENSCSAG00000008460	SMARCA1	100	98.582	ENSCAFG00020001751	SMARCA1	100	98.582	Canis_lupus_dingo
ENSCSAG00000008460	SMARCA1	100	97.455	ENSCHIG00000009837	SMARCA1	100	97.455	Capra_hircus
ENSCSAG00000008460	SMARCA1	95	98.800	ENSTSYG00000004240	SMARCA1	98	98.167	Carlito_syrichta
ENSCSAG00000008460	SMARCA1	97	96.981	ENSCPOG00000013601	SMARCA1	95	97.313	Cavia_porcellus
ENSCSAG00000008460	SMARCA1	100	96.692	ENSCCAG00000030817	SMARCA1	100	96.692	Cebus_capucinus
ENSCSAG00000008460	SMARCA1	100	98.785	ENSCATG00000015921	SMARCA1	99	99.903	Cercocebus_atys
ENSCSAG00000008460	SMARCA1	100	97.164	ENSCLAG00000002171	SMARCA1	100	97.164	Chinchilla_lanigera
ENSCSAG00000008460	SMARCA1	95	92.707	ENSCPBG00000001146	SMARCA1	94	92.793	Chrysemys_picta_bellii
ENSCSAG00000008460	SMARCA1	92	73.797	ENSCING00000004110	swi/snf	97	73.797	Ciona_intestinalis
ENSCSAG00000008460	SMARCA1	92	73.069	ENSCSAVG00000004620	-	100	74.165	Ciona_savignyi
ENSCSAG00000008460	SMARCA1	100	99.811	ENSCANG00000007183	SMARCA1	100	99.811	Colobus_angolensis_palliatus
ENSCSAG00000008460	SMARCA1	100	95.940	ENSCGRG00001010776	Smarca1	98	96.343	Cricetulus_griseus_chok1gshd
ENSCSAG00000008460	SMARCA1	93	95.547	ENSCGRG00000015301	Smarca1	98	96.024	Cricetulus_griseus_crigri
ENSCSAG00000008460	SMARCA1	92	83.709	ENSCSEG00000000328	smarca5	95	83.114	Cynoglossus_semilaevis
ENSCSAG00000008460	SMARCA1	93	83.096	ENSCVAG00000008668	smarca5	99	83.628	Cyprinodon_variegatus
ENSCSAG00000008460	SMARCA1	93	85.375	ENSDARG00000012776	smarca1	97	85.375	Danio_rerio
ENSCSAG00000008460	SMARCA1	93	82.727	ENSDARG00000052348	smarca5	95	82.727	Danio_rerio
ENSCSAG00000008460	SMARCA1	98	96.232	ENSDNOG00000004315	SMARCA1	99	96.232	Dasypus_novemcinctus
ENSCSAG00000008460	SMARCA1	98	96.522	ENSDORG00000009270	Smarca1	99	96.522	Dipodomys_ordii
ENSCSAG00000008460	SMARCA1	92	73.081	FBgn0011604	Iswi	98	72.305	Drosophila_melanogaster
ENSCSAG00000008460	SMARCA1	77	93.750	ENSETEG00000017426	SMARCA1	85	93.750	Echinops_telfairi
ENSCSAG00000008460	SMARCA1	93	80.899	ENSEBUG00000001239	smarca5	96	80.899	Eptatretus_burgeri
ENSCSAG00000008460	SMARCA1	97	91.538	ENSEASG00005008218	SMARCA1	100	93.333	Equus_asinus_asinus
ENSCSAG00000008460	SMARCA1	100	97.926	ENSECAG00000012106	SMARCA1	100	97.926	Equus_caballus
ENSCSAG00000008460	SMARCA1	75	97.682	ENSEEUG00000014927	SMARCA1	82	97.682	Erinaceus_europaeus
ENSCSAG00000008460	SMARCA1	94	86.540	ENSELUG00000010515	smarca1	98	86.927	Esox_lucius
ENSCSAG00000008460	SMARCA1	100	98.582	ENSFCAG00000018496	SMARCA1	100	98.582	Felis_catus
ENSCSAG00000008460	SMARCA1	86	93.538	ENSFALG00000000209	SMARCA1	98	93.640	Ficedula_albicollis
ENSCSAG00000008460	SMARCA1	93	96.973	ENSFDAG00000009818	SMARCA1	97	96.973	Fukomys_damarensis
ENSCSAG00000008460	SMARCA1	99	79.103	ENSFHEG00000007687	smarca5	94	82.828	Fundulus_heteroclitus
ENSCSAG00000008460	SMARCA1	94	91.037	ENSGALG00000008431	SMARCA1	96	93.018	Gallus_gallus
ENSCSAG00000008460	SMARCA1	93	83.503	ENSGAFG00000017731	smarca5	95	82.828	Gambusia_affinis
ENSCSAG00000008460	SMARCA1	92	93.519	ENSGAGG00000023575	SMARCA1	100	93.519	Gopherus_agassizii
ENSCSAG00000008460	SMARCA1	75	96.000	ENSGGOG00000012841	-	98	96.000	Gorilla_gorilla
ENSCSAG00000008460	SMARCA1	100	97.164	ENSHGLG00000003080	SMARCA1	100	97.164	Heterocephalus_glaber_female
ENSCSAG00000008460	SMARCA1	94	96.803	ENSHGLG00100001102	SMARCA1	100	96.803	Heterocephalus_glaber_male
ENSCSAG00000008460	SMARCA1	92	83.538	ENSHCOG00000005458	smarca5	95	82.727	Hippocampus_comes
ENSCSAG00000008460	SMARCA1	95	85.149	ENSIPUG00000016905	Smarca1	99	86.925	Ictalurus_punctatus
ENSCSAG00000008460	SMARCA1	97	80.607	ENSIPUG00000005229	SMARCA5	97	82.657	Ictalurus_punctatus
ENSCSAG00000008460	SMARCA1	100	98.393	ENSSTOG00000014524	SMARCA1	100	98.393	Ictidomys_tridecemlineatus
ENSCSAG00000008460	SMARCA1	100	96.237	ENSJJAG00000002593	Smarca1	100	96.237	Jaculus_jaculus
ENSCSAG00000008460	SMARCA1	92	83.742	ENSKMAG00000003777	smarca5	95	82.929	Kryptolebias_marmoratus
ENSCSAG00000008460	SMARCA1	93	82.626	ENSLBEG00000018112	smarca5	95	82.626	Labrus_bergylta
ENSCSAG00000008460	SMARCA1	88	83.888	ENSLBEG00000013295	SMARCA1	100	84.829	Labrus_bergylta
ENSCSAG00000008460	SMARCA1	96	89.250	ENSLACG00000016697	SMARCA1	98	90.190	Latimeria_chalumnae
ENSCSAG00000008460	SMARCA1	94	88.855	ENSLOCG00000014591	smarca1	97	88.855	Lepisosteus_oculatus
ENSCSAG00000008460	SMARCA1	95	96.720	ENSLAFG00000000896	SMARCA1	100	96.720	Loxodonta_africana
ENSCSAG00000008460	SMARCA1	100	99.905	ENSMFAG00000002117	SMARCA1	99	99.903	Macaca_fascicularis
ENSCSAG00000008460	SMARCA1	100	98.785	ENSMMUG00000008818	SMARCA1	99	99.903	Macaca_mulatta
ENSCSAG00000008460	SMARCA1	100	98.785	ENSMNEG00000041768	SMARCA1	99	99.903	Macaca_nemestrina
ENSCSAG00000008460	SMARCA1	100	99.811	ENSMLEG00000043198	SMARCA1	100	99.811	Mandrillus_leucophaeus
ENSCSAG00000008460	SMARCA1	93	83.707	ENSMAMG00000014294	smarca5	96	82.583	Mastacembelus_armatus
ENSCSAG00000008460	SMARCA1	96	81.158	ENSMZEG00005009369	smarca5	95	83.165	Maylandia_zebra
ENSCSAG00000008460	SMARCA1	95	91.232	ENSMGAG00000007042	SMARCA1	99	91.395	Meleagris_gallopavo
ENSCSAG00000008460	SMARCA1	98	95.865	ENSMAUG00000008133	Smarca1	99	95.865	Mesocricetus_auratus
ENSCSAG00000008460	SMARCA1	100	98.393	ENSMICG00000015768	SMARCA1	100	98.393	Microcebus_murinus
ENSCSAG00000008460	SMARCA1	100	95.673	ENSMOCG00000009464	Smarca1	100	95.673	Microtus_ochrogaster
ENSCSAG00000008460	SMARCA1	93	81.231	ENSMMOG00000005547	smarca5	99	81.231	Mola_mola
ENSCSAG00000008460	SMARCA1	98	89.555	ENSMODG00000013187	-	99	89.545	Monodelphis_domestica
ENSCSAG00000008460	SMARCA1	92	83.333	ENSMALG00000002081	smarca5	97	82.922	Monopterus_albus
ENSCSAG00000008460	SMARCA1	100	95.861	MGP_CAROLIEiJ_G0033034	Smarca1	100	95.861	Mus_caroli
ENSCSAG00000008460	SMARCA1	100	95.861	ENSMUSG00000031099	Smarca1	100	95.861	Mus_musculus
ENSCSAG00000008460	SMARCA1	100	95.955	MGP_PahariEiJ_G0031579	Smarca1	100	95.955	Mus_pahari
ENSCSAG00000008460	SMARCA1	100	95.955	MGP_SPRETEiJ_G0034192	Smarca1	100	95.955	Mus_spretus
ENSCSAG00000008460	SMARCA1	100	97.103	ENSMPUG00000017423	SMARCA1	95	97.103	Mustela_putorius_furo
ENSCSAG00000008460	SMARCA1	100	94.310	ENSMLUG00000029614	SMARCA1	100	93.750	Myotis_lucifugus
ENSCSAG00000008460	SMARCA1	98	96.731	ENSNGAG00000006492	Smarca1	99	96.731	Nannospalax_galili
ENSCSAG00000008460	SMARCA1	93	83.809	ENSNBRG00000004463	smarca5	99	83.131	Neolamprologus_brichardi
ENSCSAG00000008460	SMARCA1	100	97.944	ENSNLEG00000015179	SMARCA1	100	97.944	Nomascus_leucogenys
ENSCSAG00000008460	SMARCA1	89	82.038	ENSMEUG00000008819	SMARCA1	99	82.019	Notamacropus_eugenii
ENSCSAG00000008460	SMARCA1	98	95.511	ENSODEG00000012163	SMARCA1	99	95.511	Octodon_degus
ENSCSAG00000008460	SMARCA1	96	81.256	ENSONIG00000009993	smarca5	95	83.266	Oreochromis_niloticus
ENSCSAG00000008460	SMARCA1	92	93.827	ENSOANG00000002862	SMARCA1	100	93.827	Ornithorhynchus_anatinus
ENSCSAG00000008460	SMARCA1	100	96.786	ENSOCUG00000001047	SMARCA1	100	96.786	Oryctolagus_cuniculus
ENSCSAG00000008460	SMARCA1	92	83.640	ENSORLG00000021998	smarca5	95	82.828	Oryzias_latipes
ENSCSAG00000008460	SMARCA1	92	83.742	ENSORLG00020017679	smarca5	95	82.929	Oryzias_latipes_hni
ENSCSAG00000008460	SMARCA1	92	83.640	ENSORLG00015017210	smarca5	95	82.727	Oryzias_latipes_hsok
ENSCSAG00000008460	SMARCA1	92	83.640	ENSOMEG00000000086	smarca5	95	82.727	Oryzias_melastigma
ENSCSAG00000008460	SMARCA1	98	97.421	ENSOGAG00000004399	SMARCA1	99	97.421	Otolemur_garnettii
ENSCSAG00000008460	SMARCA1	95	97.236	ENSOARG00000014638	SMARCA1	100	98.878	Ovis_aries
ENSCSAG00000008460	SMARCA1	100	99.905	ENSPPAG00000034647	SMARCA1	100	99.905	Pan_paniscus
ENSCSAG00000008460	SMARCA1	100	98.582	ENSPPRG00000008929	SMARCA1	100	98.582	Panthera_pardus
ENSCSAG00000008460	SMARCA1	95	96.755	ENSPTIG00000000915	SMARCA1	98	96.755	Panthera_tigris_altaica
ENSCSAG00000008460	SMARCA1	100	99.905	ENSPTRG00000049876	SMARCA1	99	99.903	Pan_troglodytes
ENSCSAG00000008460	SMARCA1	100	99.905	ENSPANG00000003871	SMARCA1	100	99.905	Papio_anubis
ENSCSAG00000008460	SMARCA1	89	87.315	ENSPKIG00000013411	smarca1	98	87.124	Paramormyrops_kingsleyae
ENSCSAG00000008460	SMARCA1	95	91.412	ENSPSIG00000010101	SMARCA1	100	93.210	Pelodiscus_sinensis
ENSCSAG00000008460	SMARCA1	98	96.538	ENSPEMG00000017503	Smarca1	99	96.538	Peromyscus_maniculatus_bairdii
ENSCSAG00000008460	SMARCA1	95	92.108	ENSPCIG00000015460	SMARCA1	98	92.192	Phascolarctos_cinereus
ENSCSAG00000008460	SMARCA1	92	83.742	ENSPFOG00000007649	smarca5	95	82.828	Poecilia_formosa
ENSCSAG00000008460	SMARCA1	92	83.742	ENSPLAG00000003363	smarca5	95	82.828	Poecilia_latipinna
ENSCSAG00000008460	SMARCA1	92	83.640	ENSPMEG00000019849	smarca5	95	82.727	Poecilia_mexicana
ENSCSAG00000008460	SMARCA1	92	83.640	ENSPREG00000023250	smarca5	95	82.727	Poecilia_reticulata
ENSCSAG00000008460	SMARCA1	100	97.164	ENSPPYG00000020703	SMARCA1	100	97.164	Pongo_abelii
ENSCSAG00000008460	SMARCA1	76	89.189	ENSPCOG00000020722	SMARCA1	94	93.539	Propithecus_coquereli
ENSCSAG00000008460	SMARCA1	92	95.882	ENSPVAG00000003805	SMARCA1	94	95.882	Pteropus_vampyrus
ENSCSAG00000008460	SMARCA1	55	84.384	ENSPNYG00000012299	smarca5	92	82.933	Pundamilia_nyererei
ENSCSAG00000008460	SMARCA1	100	96.408	ENSRNOG00000003762	Smarca1	100	96.408	Rattus_norvegicus
ENSCSAG00000008460	SMARCA1	100	99.811	ENSRROG00000034167	SMARCA1	100	99.811	Rhinopithecus_roxellana
ENSCSAG00000008460	SMARCA1	96	97.096	ENSSBOG00000020641	SMARCA1	100	99.796	Saimiri_boliviensis_boliviensis
ENSCSAG00000008460	SMARCA1	92	86.742	ENSSHAG00000013518	SMARCA1	99	86.742	Sarcophilus_harrisii
ENSCSAG00000008460	SMARCA1	95	82.154	ENSSFOG00015016794	smarca5	100	83.814	Scleropages_formosus
ENSCSAG00000008460	SMARCA1	98	85.314	ENSSFOG00015009043	smarca1	98	87.675	Scleropages_formosus
ENSCSAG00000008460	SMARCA1	93	82.371	ENSSMAG00000004801	smarca5	95	82.371	Scophthalmus_maximus
ENSCSAG00000008460	SMARCA1	93	83.198	ENSSDUG00000020690	smarca5	96	82.525	Seriola_dumerili
ENSCSAG00000008460	SMARCA1	93	83.198	ENSSLDG00000025190	smarca5	96	82.525	Seriola_lalandi_dorsalis
ENSCSAG00000008460	SMARCA1	85	88.257	ENSSARG00000000842	SMARCA1	92	88.257	Sorex_araneus
ENSCSAG00000008460	SMARCA1	92	92.119	ENSSPUG00000000590	SMARCA1	94	92.103	Sphenodon_punctatus
ENSCSAG00000008460	SMARCA1	93	83.299	ENSSPAG00000002894	smarca5	97	84.026	Stegastes_partitus
ENSCSAG00000008460	SMARCA1	98	97.784	ENSSSCG00000012649	SMARCA1	99	97.784	Sus_scrofa
ENSCSAG00000008460	SMARCA1	93	92.770	ENSTGUG00000003899	-	100	92.770	Taeniopygia_guttata
ENSCSAG00000008460	SMARCA1	93	83.401	ENSTRUG00000014094	smarca5	95	82.727	Takifugu_rubripes
ENSCSAG00000008460	SMARCA1	92	82.582	ENSTNIG00000017717	smarca5	94	81.616	Tetraodon_nigroviridis
ENSCSAG00000008460	SMARCA1	92	90.091	ENSTBEG00000014973	SMARCA1	99	90.091	Tupaia_belangeri
ENSCSAG00000008460	SMARCA1	92	94.201	ENSTTRG00000006168	SMARCA1	99	94.201	Tursiops_truncatus
ENSCSAG00000008460	SMARCA1	100	98.015	ENSUAMG00000020201	SMARCA1	100	98.015	Ursus_americanus
ENSCSAG00000008460	SMARCA1	95	92.885	ENSUMAG00000004073	SMARCA1	97	98.783	Ursus_maritimus
ENSCSAG00000008460	SMARCA1	72	99.675	ENSVPAG00000010492	-	79	99.675	Vicugna_pacos
ENSCSAG00000008460	SMARCA1	95	98.900	ENSVVUG00000008878	SMARCA1	99	99.060	Vulpes_vulpes
ENSCSAG00000008460	SMARCA1	94	89.347	ENSXETG00000001526	smarca1	99	89.347	Xenopus_tropicalis
ENSCSAG00000008460	SMARCA1	93	83.401	ENSXCOG00000011170	smarca5	98	82.727	Xiphophorus_couchianus
ENSCSAG00000008460	SMARCA1	93	83.401	ENSXMAG00000009678	smarca5	97	84.978	Xiphophorus_maculatus