EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000008517 (Gene tree)
Gene ID: 103221767
Gene Symbol: DDX39B
Alias: BAT1|D6S81E|UAP56
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 9766 bases
Position: chr17:40447061-40456826
Accession: 13917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000004768	ResIII	PF04851.15	8.4e-08	1	1
ENSCSAP00000004768	DEAD	PF00270.29	4.4e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000006567	DDX39B-201	1386	-	ENSCSAP00000004768	425 (aa)	-	A0A0D9R829

Gene Model

Click here to download ENSCSAG00000008517's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03013	RNA transport	KEGG
csab03015	mRNA surveillance pathway	KEGG
csab03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000008517's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000008517	DDX39B	92	36.802	ENSCSAG00000011468	EIF4A1	95	36.802
ENSCSAG00000008517	DDX39B	84	30.352	ENSCSAG00000002279	DDX25	80	30.556
ENSCSAG00000008517	DDX39B	81	35.159	ENSCSAG00000008569	DDX47	75	35.159
ENSCSAG00000008517	DDX39B	80	32.948	ENSCSAG00000005251	DDX49	71	32.948
ENSCSAG00000008517	DDX39B	99	34.272	ENSCSAG00000002564	DDX6	78	35.938
ENSCSAG00000008517	DDX39B	77	38.298	ENSCSAG00000009233	EIF4A2	90	38.298
ENSCSAG00000008517	DDX39B	78	30.029	ENSCSAG00000004022	DDX5	55	30.029
ENSCSAG00000008517	DDX39B	91	32.832	ENSCSAG00000004469	-	82	32.832
ENSCSAG00000008517	DDX39B	91	32.581	ENSCSAG00000004462	DDX19A	82	32.581
ENSCSAG00000008517	DDX39B	87	30.159	ENSCSAG00000013799	DDX59	60	30.159
ENSCSAG00000008517	DDX39B	100	89.882	ENSCSAG00000006342	DDX39A	99	89.882

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000008517	DDX39B	100	99.765	ENSG00000198563	DDX39B	100	100.000	Homo_sapiens
ENSCSAG00000008517	DDX39B	100	99.529	ENSAMEG00000009508	DDX39B	99	99.529	Ailuropoda_melanoleuca
ENSCSAG00000008517	DDX39B	100	93.473	ENSACIG00000004534	ddx39b	99	93.473	Amphilophus_citrinellus
ENSCSAG00000008517	DDX39B	100	93.007	ENSATEG00000012366	ddx39b	99	93.007	Anabas_testudineus
ENSCSAG00000008517	DDX39B	100	96.948	ENSACAG00000012240	DDX39B	99	96.948	Anolis_carolinensis
ENSCSAG00000008517	DDX39B	100	99.765	ENSANAG00000030372	DDX39B	99	99.765	Aotus_nancymaae
ENSCSAG00000008517	DDX39B	100	91.204	ENSACLG00000018759	ddx39b	99	91.204	Astatotilapia_calliptera
ENSCSAG00000008517	DDX39B	100	92.148	ENSAMXG00000017837	ddx39b	99	92.148	Astyanax_mexicanus
ENSCSAG00000008517	DDX39B	100	99.529	ENSBTAG00000014490	DDX39B	99	99.529	Bos_taurus
ENSCSAG00000008517	DDX39B	100	99.765	ENSCJAG00000003152	DDX39B	99	99.765	Callithrix_jacchus
ENSCSAG00000008517	DDX39B	100	99.294	ENSCAFG00000000509	DDX39B	99	99.674	Canis_familiaris
ENSCSAG00000008517	DDX39B	100	99.294	ENSCAFG00020020530	DDX39B	99	99.294	Canis_lupus_dingo
ENSCSAG00000008517	DDX39B	100	99.529	ENSCHIG00000004579	DDX39B	99	99.529	Capra_hircus
ENSCSAG00000008517	DDX39B	100	99.765	ENSTSYG00000010226	-	99	99.765	Carlito_syrichta
ENSCSAG00000008517	DDX39B	100	85.176	ENSTSYG00000029741	-	91	88.095	Carlito_syrichta
ENSCSAG00000008517	DDX39B	100	99.529	ENSCAPG00000010066	DDX39B	99	99.529	Cavia_aperea
ENSCSAG00000008517	DDX39B	100	99.529	ENSCPOG00000002335	DDX39B	99	99.529	Cavia_porcellus
ENSCSAG00000008517	DDX39B	100	99.765	ENSCCAG00000027897	DDX39B	99	99.765	Cebus_capucinus
ENSCSAG00000008517	DDX39B	100	90.588	ENSCATG00000043709	DDX39B	99	90.588	Cercocebus_atys
ENSCSAG00000008517	DDX39B	100	99.529	ENSCLAG00000014555	DDX39B	99	99.529	Chinchilla_lanigera
ENSCSAG00000008517	DDX39B	64	99.630	ENSCPBG00000014671	-	99	99.630	Chrysemys_picta_bellii
ENSCSAG00000008517	DDX39B	100	99.765	ENSCANG00000041217	DDX39B	99	99.765	Colobus_angolensis_palliatus
ENSCSAG00000008517	DDX39B	83	84.375	ENSCGRG00001021916	-	87	84.375	Cricetulus_griseus_chok1gshd
ENSCSAG00000008517	DDX39B	58	99.184	ENSCGRG00001017315	-	95	99.029	Cricetulus_griseus_chok1gshd
ENSCSAG00000008517	DDX39B	58	99.184	ENSCGRG00000012479	-	76	99.184	Cricetulus_griseus_crigri
ENSCSAG00000008517	DDX39B	100	91.898	ENSDARG00000036069	ddx39b	99	92.130	Danio_rerio
ENSCSAG00000008517	DDX39B	100	99.765	ENSDNOG00000010215	DDX39B	99	99.765	Dasypus_novemcinctus
ENSCSAG00000008517	DDX39B	88	99.733	ENSDORG00000004985	Ddx39b	100	99.733	Dipodomys_ordii
ENSCSAG00000008517	DDX39B	88	86.898	ENSETEG00000009649	DDX39B	87	86.898	Echinops_telfairi
ENSCSAG00000008517	DDX39B	100	99.765	ENSEASG00005017156	DDX39B	99	99.765	Equus_asinus_asinus
ENSCSAG00000008517	DDX39B	100	99.765	ENSECAG00000007750	DDX39B	99	99.765	Equus_caballus
ENSCSAG00000008517	DDX39B	100	92.290	ENSELUG00000017904	ddx39b	99	92.290	Esox_lucius
ENSCSAG00000008517	DDX39B	100	99.529	ENSFCAG00000004497	DDX39B	99	99.529	Felis_catus
ENSCSAG00000008517	DDX39B	100	99.529	ENSFDAG00000011074	DDX39B	99	99.529	Fukomys_damarensis
ENSCSAG00000008517	DDX39B	74	99.361	ENSGAGG00000001300	-	79	99.361	Gopherus_agassizii
ENSCSAG00000008517	DDX39B	100	99.765	ENSGGOG00000005989	DDX39B	99	99.765	Gorilla_gorilla
ENSCSAG00000008517	DDX39B	100	99.059	ENSHGLG00000019248	DDX39B	99	99.059	Heterocephalus_glaber_female
ENSCSAG00000008517	DDX39B	100	99.059	ENSHGLG00100011850	DDX39B	99	99.059	Heterocephalus_glaber_male
ENSCSAG00000008517	DDX39B	100	90.993	ENSIPUG00000015733	DDX39B	94	91.455	Ictalurus_punctatus
ENSCSAG00000008517	DDX39B	100	99.294	ENSSTOG00000012838	DDX39B	99	99.294	Ictidomys_tridecemlineatus
ENSCSAG00000008517	DDX39B	100	99.059	ENSJJAG00000005660	-	99	99.059	Jaculus_jaculus
ENSCSAG00000008517	DDX39B	66	79.078	ENSLBEG00000017177	-	85	75.102	Labrus_bergylta
ENSCSAG00000008517	DDX39B	100	78.118	ENSLBEG00000012254	ddx39b	99	78.037	Labrus_bergylta
ENSCSAG00000008517	DDX39B	100	89.559	ENSLACG00000002110	DDX39B	99	89.559	Latimeria_chalumnae
ENSCSAG00000008517	DDX39B	100	99.529	ENSLAFG00000014202	DDX39B	99	99.529	Loxodonta_africana
ENSCSAG00000008517	DDX39B	100	99.765	ENSMFAG00000034233	DDX39B	99	99.765	Macaca_fascicularis
ENSCSAG00000008517	DDX39B	100	99.765	ENSMMUG00000008839	DDX39B	99	99.765	Macaca_mulatta
ENSCSAG00000008517	DDX39B	100	99.765	ENSMNEG00000041059	DDX39B	99	99.765	Macaca_nemestrina
ENSCSAG00000008517	DDX39B	100	99.765	ENSMLEG00000043791	DDX39B	99	99.765	Mandrillus_leucophaeus
ENSCSAG00000008517	DDX39B	100	91.204	ENSMZEG00005017654	ddx39b	99	91.204	Maylandia_zebra
ENSCSAG00000008517	DDX39B	100	99.059	ENSMAUG00000008059	Ddx39b	99	99.059	Mesocricetus_auratus
ENSCSAG00000008517	DDX39B	100	99.765	ENSMICG00000017349	DDX39B	99	99.765	Microcebus_murinus
ENSCSAG00000008517	DDX39B	100	99.294	ENSMOCG00000011169	Ddx39b	99	99.294	Microtus_ochrogaster
ENSCSAG00000008517	DDX39B	88	99.734	ENSMODG00000015791	DDX39B	88	99.734	Monodelphis_domestica
ENSCSAG00000008517	DDX39B	100	99.294	ENSMUSG00000019432	Ddx39b	100	100.000	Mus_musculus
ENSCSAG00000008517	DDX39B	100	99.294	MGP_PahariEiJ_G0020513	Ddx39b	100	100.000	Mus_pahari
ENSCSAG00000008517	DDX39B	100	99.294	MGP_SPRETEiJ_G0022424	Ddx39b	99	99.294	Mus_spretus
ENSCSAG00000008517	DDX39B	100	99.529	ENSMPUG00000011407	DDX39B	99	99.529	Mustela_putorius_furo
ENSCSAG00000008517	DDX39B	72	99.675	ENSMLUG00000001681	DDX39B	99	99.675	Myotis_lucifugus
ENSCSAG00000008517	DDX39B	100	99.765	ENSNGAG00000022948	Ddx39b	99	99.765	Nannospalax_galili
ENSCSAG00000008517	DDX39B	100	75.059	ENSNLEG00000006094	DDX39B	99	75.059	Nomascus_leucogenys
ENSCSAG00000008517	DDX39B	85	99.543	ENSMEUG00000008264	DDX39B	85	99.543	Notamacropus_eugenii
ENSCSAG00000008517	DDX39B	100	99.529	ENSOPRG00000011923	DDX39B	99	99.529	Ochotona_princeps
ENSCSAG00000008517	DDX39B	100	99.294	ENSODEG00000018083	DDX39B	99	99.294	Octodon_degus
ENSCSAG00000008517	DDX39B	100	92.075	ENSONIG00000004740	ddx39b	99	92.075	Oreochromis_niloticus
ENSCSAG00000008517	DDX39B	56	99.156	ENSOANG00000008361	DDX39B	95	99.156	Ornithorhynchus_anatinus
ENSCSAG00000008517	DDX39B	100	95.909	ENSOCUG00000024126	DDX39B	99	95.909	Oryctolagus_cuniculus
ENSCSAG00000008517	DDX39B	84	91.375	ENSOGAG00000009067	-	100	98.765	Otolemur_garnettii
ENSCSAG00000008517	DDX39B	100	98.357	ENSOGAG00000028850	-	99	98.357	Otolemur_garnettii
ENSCSAG00000008517	DDX39B	100	99.529	ENSOARG00000008787	DDX39B	97	99.529	Ovis_aries
ENSCSAG00000008517	DDX39B	100	99.765	ENSPPAG00000043072	DDX39B	99	99.765	Pan_paniscus
ENSCSAG00000008517	DDX39B	100	99.529	ENSPPRG00000001913	DDX39B	99	99.529	Panthera_pardus
ENSCSAG00000008517	DDX39B	100	98.588	ENSPTIG00000017669	DDX39B	99	98.588	Panthera_tigris_altaica
ENSCSAG00000008517	DDX39B	100	99.765	ENSPTRG00000032509	DDX39B	99	99.765	Pan_troglodytes
ENSCSAG00000008517	DDX39B	100	99.765	ENSPANG00000018609	DDX39B	99	99.765	Papio_anubis
ENSCSAG00000008517	DDX39B	100	90.553	ENSPKIG00000011324	ddx39b	99	91.244	Paramormyrops_kingsleyae
ENSCSAG00000008517	DDX39B	100	99.059	ENSPEMG00000016905	Ddx39b	99	99.059	Peromyscus_maniculatus_bairdii
ENSCSAG00000008517	DDX39B	100	99.765	ENSPCIG00000017572	DDX39B	99	99.765	Phascolarctos_cinereus
ENSCSAG00000008517	DDX39B	100	99.765	ENSPPYG00000016433	DDX39B	99	99.765	Pongo_abelii
ENSCSAG00000008517	DDX39B	66	99.288	ENSPCAG00000003484	DDX39B	99	99.288	Procavia_capensis
ENSCSAG00000008517	DDX39B	100	99.765	ENSPCOG00000018656	DDX39B	99	99.765	Propithecus_coquereli
ENSCSAG00000008517	DDX39B	100	99.294	ENSPVAG00000004653	DDX39B	99	99.294	Pteropus_vampyrus
ENSCSAG00000008517	DDX39B	99	82.783	ENSPNYG00000010382	ddx39b	99	82.751	Pundamilia_nyererei
ENSCSAG00000008517	DDX39B	100	91.917	ENSPNAG00000026926	ddx39b	99	91.917	Pygocentrus_nattereri
ENSCSAG00000008517	DDX39B	100	99.294	ENSRNOG00000000841	Ddx39b	99	99.294	Rattus_norvegicus
ENSCSAG00000008517	DDX39B	100	89.412	ENSRBIG00000031309	DDX39B	99	89.412	Rhinopithecus_bieti
ENSCSAG00000008517	DDX39B	100	99.765	ENSRROG00000039517	DDX39B	99	99.765	Rhinopithecus_roxellana
ENSCSAG00000008517	DDX39B	100	89.412	ENSSBOG00000035513	-	99	89.412	Saimiri_boliviensis_boliviensis
ENSCSAG00000008517	DDX39B	100	99.765	ENSSHAG00000003209	DDX39B	99	99.765	Sarcophilus_harrisii
ENSCSAG00000008517	DDX39B	100	91.014	ENSSFOG00015016107	ddx39b	99	91.475	Scleropages_formosus
ENSCSAG00000008517	DDX39B	100	93.473	ENSSDUG00000011557	ddx39b	99	93.706	Seriola_dumerili
ENSCSAG00000008517	DDX39B	100	93.240	ENSSLDG00000015763	ddx39b	99	93.473	Seriola_lalandi_dorsalis
ENSCSAG00000008517	DDX39B	88	87.701	ENSSARG00000005245	DDX39B	100	87.701	Sorex_araneus
ENSCSAG00000008517	DDX39B	100	97.647	ENSSPUG00000012805	DDX39B	99	97.647	Sphenodon_punctatus
ENSCSAG00000008517	DDX39B	100	99.765	ENSSSCG00000001400	DDX39B	99	99.708	Sus_scrofa
ENSCSAG00000008517	DDX39B	100	76.471	ENSTBEG00000003721	DDX39B	99	76.471	Tupaia_belangeri
ENSCSAG00000008517	DDX39B	100	91.163	ENSTTRG00000014074	DDX39B	99	91.163	Tursiops_truncatus
ENSCSAG00000008517	DDX39B	100	86.651	ENSUAMG00000027335	DDX39B	99	86.651	Ursus_americanus
ENSCSAG00000008517	DDX39B	100	90.588	ENSUMAG00000015124	DDX39B	99	90.588	Ursus_maritimus
ENSCSAG00000008517	DDX39B	62	100.000	ENSVPAG00000009167	-	74	100.000	Vicugna_pacos
ENSCSAG00000008517	DDX39B	100	99.294	ENSVVUG00000019518	DDX39B	98	99.294	Vulpes_vulpes
ENSCSAG00000008517	DDX39B	100	83.607	ENSXETG00000002498	ddx39b	98	83.607	Xenopus_tropicalis