EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000008744 (Gene tree)
Gene ID: 103218591
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 21866 bases
Position: chr11:10500361-10522226
Accession: 103218591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000004954	CSD	PF00313.22	3.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000006756	YBX3-201	1122	-	ENSCSAP00000004954	373 (aa)	XP_007965836	A0A0D9R8L5

Gene Model

Click here to download ENSCSAG00000008744's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000008744's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000008744	YBX3	100	99.196	ENSG00000060138	YBX3	100	99.196	Homo_sapiens
ENSCSAG00000008744	YBX3	96	85.196	ENSAMEG00000009393	YBX3	95	89.706	Ailuropoda_melanoleuca
ENSCSAG00000008744	YBX3	76	64.336	ENSAPLG00000003147	YBX3	100	64.336	Anas_platyrhynchos
ENSCSAG00000008744	YBX3	98	86.923	ENSANAG00000033366	-	93	86.923	Aotus_nancymaae
ENSCSAG00000008744	YBX3	100	96.783	ENSANAG00000024492	-	100	98.418	Aotus_nancymaae
ENSCSAG00000008744	YBX3	100	81.654	ENSBTAG00000009663	YBX3	100	76.744	Bos_taurus
ENSCSAG00000008744	YBX3	80	89.286	ENSCJAG00000033824	-	98	91.892	Callithrix_jacchus
ENSCSAG00000008744	YBX3	100	95.710	ENSCJAG00000021660	-	100	95.710	Callithrix_jacchus
ENSCSAG00000008744	YBX3	77	92.014	ENSCAFG00000013401	YBX3	84	92.884	Canis_familiaris
ENSCSAG00000008744	YBX3	100	87.200	ENSCAFG00020006412	YBX3	100	86.400	Canis_lupus_dingo
ENSCSAG00000008744	YBX3	100	81.654	ENSCHIG00000010863	YBX3	100	80.000	Capra_hircus
ENSCSAG00000008744	YBX3	100	54.155	ENSTSYG00000035821	-	97	79.464	Carlito_syrichta
ENSCSAG00000008744	YBX3	77	94.425	ENSTSYG00000004204	-	88	94.425	Carlito_syrichta
ENSCSAG00000008744	YBX3	77	86.411	ENSCAPG00000015039	YBX3	93	86.411	Cavia_aperea
ENSCSAG00000008744	YBX3	79	87.372	ENSCPOG00000011329	YBX3	86	87.372	Cavia_porcellus
ENSCSAG00000008744	YBX3	100	96.515	ENSCCAG00000016469	YBX3	100	96.515	Cebus_capucinus
ENSCSAG00000008744	YBX3	100	99.464	ENSCATG00000034411	YBX3	100	99.464	Cercocebus_atys
ENSCSAG00000008744	YBX3	77	86.760	ENSCLAG00000016030	YBX3	94	86.760	Chinchilla_lanigera
ENSCSAG00000008744	YBX3	77	82.759	ENSCHOG00000011988	YBX3	54	92.593	Choloepus_hoffmanni
ENSCSAG00000008744	YBX3	78	79.381	ENSCPBG00000014147	YBX3	81	78.498	Chrysemys_picta_bellii
ENSCSAG00000008744	YBX3	84	99.048	ENSCANG00000036801	YBX3	100	99.048	Colobus_angolensis_palliatus
ENSCSAG00000008744	YBX3	85	89.308	ENSCGRG00001016148	Ybx3	100	83.914	Cricetulus_griseus_chok1gshd
ENSCSAG00000008744	YBX3	77	90.411	ENSCGRG00000004563	Ybx3	98	89.041	Cricetulus_griseus_crigri
ENSCSAG00000008744	YBX3	90	80.882	ENSDORG00000009103	Ybx3	81	90.244	Dipodomys_ordii
ENSCSAG00000008744	YBX3	76	84.912	ENSETEG00000002557	YBX3	99	84.155	Echinops_telfairi
ENSCSAG00000008744	YBX3	100	85.523	ENSEASG00005014726	YBX3	97	88.268	Equus_asinus_asinus
ENSCSAG00000008744	YBX3	100	88.472	ENSECAG00000013777	YBX3	100	89.008	Equus_caballus
ENSCSAG00000008744	YBX3	76	91.901	ENSEEUG00000010415	YBX3	100	91.901	Erinaceus_europaeus
ENSCSAG00000008744	YBX3	100	92.246	ENSFCAG00000027748	YBX3	100	93.583	Felis_catus
ENSCSAG00000008744	YBX3	76	65.625	ENSFALG00000003661	YBX3	100	61.806	Ficedula_albicollis
ENSCSAG00000008744	YBX3	77	85.017	ENSFDAG00000021192	YBX3	92	83.972	Fukomys_damarensis
ENSCSAG00000008744	YBX3	100	53.581	ENSGALG00000031890	YBX3	70	97.849	Gallus_gallus
ENSCSAG00000008744	YBX3	78	79.381	ENSGAGG00000017780	YBX3	81	78.840	Gopherus_agassizii
ENSCSAG00000008744	YBX3	100	99.464	ENSGGOG00000001352	YBX3	100	99.464	Gorilla_gorilla
ENSCSAG00000008744	YBX3	73	78.909	ENSHGLG00000015495	-	100	68.555	Heterocephalus_glaber_female
ENSCSAG00000008744	YBX3	81	75.163	ENSHGLG00000014798	-	86	76.094	Heterocephalus_glaber_female
ENSCSAG00000008744	YBX3	54	97.727	ENSHGLG00100003589	YBX3	87	63.415	Heterocephalus_glaber_male
ENSCSAG00000008744	YBX3	77	86.063	ENSSTOG00000002108	-	88	86.063	Ictidomys_tridecemlineatus
ENSCSAG00000008744	YBX3	93	84.682	ENSSTOG00000032577	-	100	82.842	Ictidomys_tridecemlineatus
ENSCSAG00000008744	YBX3	79	68.013	ENSJJAG00000014239	Ybx3	96	85.227	Jaculus_jaculus
ENSCSAG00000008744	YBX3	100	90.885	ENSLAFG00000017247	YBX3	100	91.421	Loxodonta_africana
ENSCSAG00000008744	YBX3	100	99.196	ENSMFAG00000039369	YBX3	100	99.196	Macaca_fascicularis
ENSCSAG00000008744	YBX3	87	99.385	ENSMMUG00000022469	YBX3	100	99.385	Macaca_mulatta
ENSCSAG00000008744	YBX3	100	98.928	ENSMNEG00000045109	YBX3	100	98.928	Macaca_nemestrina
ENSCSAG00000008744	YBX3	92	85.714	ENSMLEG00000033618	YBX3	79	99.303	Mandrillus_leucophaeus
ENSCSAG00000008744	YBX3	77	66.551	ENSMGAG00000014224	YBX3	93	100.000	Meleagris_gallopavo
ENSCSAG00000008744	YBX3	88	88.379	ENSMAUG00000012185	Ybx3	98	85.981	Mesocricetus_auratus
ENSCSAG00000008744	YBX3	86	75.556	ENSMICG00000031459	-	100	61.126	Microcebus_murinus
ENSCSAG00000008744	YBX3	100	90.080	ENSMICG00000038002	-	100	91.689	Microcebus_murinus
ENSCSAG00000008744	YBX3	83	89.068	ENSMOCG00000016291	Ybx3	96	90.847	Microtus_ochrogaster
ENSCSAG00000008744	YBX3	77	82.986	ENSMODG00000018248	YBX3	91	83.681	Monodelphis_domestica
ENSCSAG00000008744	YBX3	85	88.365	MGP_CAROLIEiJ_G0028947	Ybx3	100	83.378	Mus_caroli
ENSCSAG00000008744	YBX3	85	88.365	ENSMUSG00000030189	Ybx3	100	83.378	Mus_musculus
ENSCSAG00000008744	YBX3	85	88.994	MGP_PahariEiJ_G0022709	Ybx3	100	83.914	Mus_pahari
ENSCSAG00000008744	YBX3	85	88.679	MGP_SPRETEiJ_G0029994	Ybx3	100	83.646	Mus_spretus
ENSCSAG00000008744	YBX3	100	79.790	ENSMPUG00000011810	YBX3	100	79.265	Mustela_putorius_furo
ENSCSAG00000008744	YBX3	71	92.937	ENSMLUG00000007476	YBX3	100	91.078	Myotis_lucifugus
ENSCSAG00000008744	YBX3	79	85.522	ENSNGAG00000000710	Ybx3	88	84.404	Nannospalax_galili
ENSCSAG00000008744	YBX3	95	94.085	ENSNLEG00000034844	YBX3	100	94.085	Nomascus_leucogenys
ENSCSAG00000008744	YBX3	82	80.592	ENSODEG00000017957	YBX3	94	81.308	Octodon_degus
ENSCSAG00000008744	YBX3	79	87.119	ENSOCUG00000001889	YBX3	85	86.780	Oryctolagus_cuniculus
ENSCSAG00000008744	YBX3	100	89.474	ENSOGAG00000013245	YBX3	100	89.211	Otolemur_garnettii
ENSCSAG00000008744	YBX3	80	77.926	ENSOARG00000020919	YBX3	99	82.155	Ovis_aries
ENSCSAG00000008744	YBX3	100	91.957	ENSPPAG00000039068	YBX3	100	91.957	Pan_paniscus
ENSCSAG00000008744	YBX3	100	91.979	ENSPPRG00000005859	YBX3	100	93.316	Panthera_pardus
ENSCSAG00000008744	YBX3	76	92.632	ENSPTIG00000005322	YBX3	81	91.986	Panthera_tigris_altaica
ENSCSAG00000008744	YBX3	100	99.198	ENSPTRG00000004681	YBX3	100	99.198	Pan_troglodytes
ENSCSAG00000008744	YBX3	100	99.196	ENSPANG00000010280	YBX3	100	99.196	Papio_anubis
ENSCSAG00000008744	YBX3	57	99.038	ENSPSIG00000009247	YBX3	95	100.000	Pelodiscus_sinensis
ENSCSAG00000008744	YBX3	62	91.525	ENSPEMG00000010391	-	85	65.763	Peromyscus_maniculatus_bairdii
ENSCSAG00000008744	YBX3	87	88.889	ENSPEMG00000012132	-	99	86.916	Peromyscus_maniculatus_bairdii
ENSCSAG00000008744	YBX3	69	81.154	ENSPCIG00000029949	YBX3	100	79.231	Phascolarctos_cinereus
ENSCSAG00000008744	YBX3	100	98.660	ENSPPYG00000004279	YBX3	100	98.660	Pongo_abelii
ENSCSAG00000008744	YBX3	79	88.396	ENSPCAG00000001397	YBX3	98	89.931	Procavia_capensis
ENSCSAG00000008744	YBX3	100	79.200	ENSPVAG00000006740	YBX3	77	92.069	Pteropus_vampyrus
ENSCSAG00000008744	YBX3	85	89.623	ENSRNOG00000005480	Ybx3	100	84.182	Rattus_norvegicus
ENSCSAG00000008744	YBX3	100	98.391	ENSRBIG00000039208	YBX3	100	98.391	Rhinopithecus_bieti
ENSCSAG00000008744	YBX3	100	98.660	ENSRROG00000029638	YBX3	100	98.660	Rhinopithecus_roxellana
ENSCSAG00000008744	YBX3	92	87.464	ENSSBOG00000030573	YBX3	87	95.593	Saimiri_boliviensis_boliviensis
ENSCSAG00000008744	YBX3	76	80.412	ENSSHAG00000003262	YBX3	98	80.412	Sarcophilus_harrisii
ENSCSAG00000008744	YBX3	100	88.189	ENSSSCG00000000633	YBX3	100	89.764	Sus_scrofa
ENSCSAG00000008744	YBX3	100	86.059	ENSTBEG00000012570	YBX3	81	94.198	Tupaia_belangeri
ENSCSAG00000008744	YBX3	71	84.211	ENSTTRG00000008045	YBX3	100	84.211	Tursiops_truncatus
ENSCSAG00000008744	YBX3	75	87.770	ENSUAMG00000016662	YBX3	100	88.129	Ursus_americanus
ENSCSAG00000008744	YBX3	76	91.228	ENSUMAG00000016118	YBX3	94	91.289	Ursus_maritimus
ENSCSAG00000008744	YBX3	76	71.626	ENSVPAG00000000876	YBX3	100	72.183	Vicugna_pacos
ENSCSAG00000008744	YBX3	75	88.129	ENSVVUG00000004956	YBX3	100	88.849	Vulpes_vulpes
ENSCSAG00000008744	YBX3	53	92.222	ENSXETG00000016239	ybx3	92	53.000	Xenopus_tropicalis