EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000008796 (Gene tree)
Gene ID: 103241953
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 30072 bases
Position: chr15:88729031-88759102
Accession: 103241953
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000005049	MMR_HSR1	PF01926.23	5.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000006855	LSG1-201	4225	-	ENSCSAP00000005049	717 (aa)	XP_008007767	A0A0D9R8W0

Gene Model

Click here to download ENSCSAG00000008796's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000008796's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000008796	LSG1	92	95.745	ENSG00000041802	LSG1	98	98.276	Homo_sapiens
ENSCSAG00000008796	LSG1	92	64.545	ENSAPOG00000009694	lsg1	99	65.152	Acanthochromis_polyacanthus
ENSCSAG00000008796	LSG1	92	83.005	ENSAMEG00000009343	LSG1	99	83.005	Ailuropoda_melanoleuca
ENSCSAG00000008796	LSG1	90	64.130	ENSACIG00000012406	lsg1	99	65.099	Amphilophus_citrinellus
ENSCSAG00000008796	LSG1	92	64.242	ENSAOCG00000016066	lsg1	99	64.848	Amphiprion_ocellaris
ENSCSAG00000008796	LSG1	92	64.697	ENSAPEG00000003252	lsg1	99	64.697	Amphiprion_percula
ENSCSAG00000008796	LSG1	90	65.528	ENSATEG00000011794	lsg1	99	65.198	Anabas_testudineus
ENSCSAG00000008796	LSG1	87	65.079	ENSACAG00000004222	LSG1	99	64.547	Anolis_carolinensis
ENSCSAG00000008796	LSG1	92	94.529	ENSANAG00000021153	LSG1	100	94.529	Aotus_nancymaae
ENSCSAG00000008796	LSG1	92	64.091	ENSACLG00000000520	lsg1	99	64.048	Astatotilapia_calliptera
ENSCSAG00000008796	LSG1	92	63.433	ENSAMXG00000008271	lsg1	99	63.238	Astyanax_mexicanus
ENSCSAG00000008796	LSG1	92	85.281	ENSBTAG00000008461	LSG1	100	85.584	Bos_taurus
ENSCSAG00000008796	LSG1	61	51.020	WBGene00016907	C53H9.2	95	58.065	Caenorhabditis_elegans
ENSCSAG00000008796	LSG1	92	93.617	ENSCJAG00000013962	LSG1	100	93.617	Callithrix_jacchus
ENSCSAG00000008796	LSG1	87	85.280	ENSCAFG00000013445	LSG1	99	85.280	Canis_familiaris
ENSCSAG00000008796	LSG1	92	83.812	ENSCAFG00020002216	LSG1	99	84.912	Canis_lupus_dingo
ENSCSAG00000008796	LSG1	92	84.347	ENSCHIG00000015769	LSG1	99	84.347	Capra_hircus
ENSCSAG00000008796	LSG1	92	88.923	ENSTSYG00000001447	LSG1	100	88.923	Carlito_syrichta
ENSCSAG00000008796	LSG1	87	77.389	ENSCAPG00000009856	LSG1	100	77.316	Cavia_aperea
ENSCSAG00000008796	LSG1	92	92.857	ENSCCAG00000035744	LSG1	100	92.857	Cebus_capucinus
ENSCSAG00000008796	LSG1	100	98.326	ENSCATG00000042060	LSG1	100	98.326	Cercocebus_atys
ENSCSAG00000008796	LSG1	95	68.559	ENSCPBG00000015941	LSG1	86	67.867	Chrysemys_picta_bellii
ENSCSAG00000008796	LSG1	60	63.158	ENSCING00000007079	-	91	63.158	Ciona_intestinalis
ENSCSAG00000008796	LSG1	69	56.612	ENSCSAVG00000002514	-	96	56.612	Ciona_savignyi
ENSCSAG00000008796	LSG1	92	98.176	ENSCANG00000030709	LSG1	100	98.176	Colobus_angolensis_palliatus
ENSCSAG00000008796	LSG1	92	82.879	ENSCGRG00001019846	Lsg1	100	83.030	Cricetulus_griseus_chok1gshd
ENSCSAG00000008796	LSG1	92	82.879	ENSCGRG00000014617	Lsg1	100	83.030	Cricetulus_griseus_crigri
ENSCSAG00000008796	LSG1	90	64.769	ENSCSEG00000008522	lsg1	99	63.514	Cynoglossus_semilaevis
ENSCSAG00000008796	LSG1	89	65.991	ENSCVAG00000002484	lsg1	99	66.515	Cyprinodon_variegatus
ENSCSAG00000008796	LSG1	92	67.629	ENSDARG00000015352	lsg1	99	67.781	Danio_rerio
ENSCSAG00000008796	LSG1	92	85.498	ENSDNOG00000006224	LSG1	100	85.196	Dasypus_novemcinctus
ENSCSAG00000008796	LSG1	77	58.197	FBgn0266284	Ns3	93	56.420	Drosophila_melanogaster
ENSCSAG00000008796	LSG1	81	86.667	ENSETEG00000003888	LSG1	89	86.667	Echinops_telfairi
ENSCSAG00000008796	LSG1	81	57.789	ENSEBUG00000003119	lsg1	85	56.436	Eptatretus_burgeri
ENSCSAG00000008796	LSG1	92	86.950	ENSEASG00005000678	LSG1	100	86.950	Equus_asinus_asinus
ENSCSAG00000008796	LSG1	92	87.253	ENSECAG00000017659	LSG1	100	87.253	Equus_caballus
ENSCSAG00000008796	LSG1	80	83.621	ENSEEUG00000015217	LSG1	87	83.621	Erinaceus_europaeus
ENSCSAG00000008796	LSG1	92	63.293	ENSELUG00000023973	lsg1	99	62.594	Esox_lucius
ENSCSAG00000008796	LSG1	92	86.170	ENSFCAG00000024957	LSG1	99	86.170	Felis_catus
ENSCSAG00000008796	LSG1	85	66.721	ENSFALG00000007210	LSG1	94	66.721	Ficedula_albicollis
ENSCSAG00000008796	LSG1	92	79.363	ENSFDAG00000017373	LSG1	100	79.363	Fukomys_damarensis
ENSCSAG00000008796	LSG1	89	64.451	ENSFHEG00000003680	lsg1	99	64.776	Fundulus_heteroclitus
ENSCSAG00000008796	LSG1	75	71.849	ENSGMOG00000015834	lsg1	87	70.238	Gadus_morhua
ENSCSAG00000008796	LSG1	99	61.646	ENSGALG00000007058	LSG1	94	61.227	Gallus_gallus
ENSCSAG00000008796	LSG1	89	65.994	ENSGAFG00000015831	lsg1	99	65.507	Gambusia_affinis
ENSCSAG00000008796	LSG1	90	62.980	ENSGACG00000009323	lsg1	99	62.033	Gasterosteus_aculeatus
ENSCSAG00000008796	LSG1	92	96.353	ENSGGOG00000000520	LSG1	100	96.353	Gorilla_gorilla
ENSCSAG00000008796	LSG1	92	63.348	ENSHBUG00000005659	lsg1	99	63.433	Haplochromis_burtoni
ENSCSAG00000008796	LSG1	92	77.225	ENSHGLG00000017390	LSG1	100	76.923	Heterocephalus_glaber_female
ENSCSAG00000008796	LSG1	92	77.225	ENSHGLG00100018587	LSG1	100	76.923	Heterocephalus_glaber_male
ENSCSAG00000008796	LSG1	89	64.451	ENSHCOG00000016848	lsg1	99	62.315	Hippocampus_comes
ENSCSAG00000008796	LSG1	92	65.198	ENSIPUG00000008631	lsg1	99	65.350	Ictalurus_punctatus
ENSCSAG00000008796	LSG1	74	79.840	ENSSTOG00000010234	LSG1	99	81.637	Ictidomys_tridecemlineatus
ENSCSAG00000008796	LSG1	92	81.269	ENSJJAG00000015513	Lsg1	100	81.269	Jaculus_jaculus
ENSCSAG00000008796	LSG1	90	63.721	ENSKMAG00000009681	lsg1	99	63.374	Kryptolebias_marmoratus
ENSCSAG00000008796	LSG1	90	62.578	ENSLBEG00000024261	lsg1	99	62.861	Labrus_bergylta
ENSCSAG00000008796	LSG1	92	65.913	ENSLACG00000013399	LSG1	99	65.913	Latimeria_chalumnae
ENSCSAG00000008796	LSG1	90	67.233	ENSLOCG00000004918	lsg1	99	66.415	Lepisosteus_oculatus
ENSCSAG00000008796	LSG1	92	84.067	ENSLAFG00000012919	-	100	84.067	Loxodonta_africana
ENSCSAG00000008796	LSG1	100	98.884	ENSMFAG00000039903	LSG1	100	98.884	Macaca_fascicularis
ENSCSAG00000008796	LSG1	92	99.392	ENSMMUG00000010708	LSG1	100	99.392	Macaca_mulatta
ENSCSAG00000008796	LSG1	100	98.466	ENSMNEG00000031538	LSG1	100	98.466	Macaca_nemestrina
ENSCSAG00000008796	LSG1	92	99.088	ENSMLEG00000041184	LSG1	100	99.088	Mandrillus_leucophaeus
ENSCSAG00000008796	LSG1	92	62.727	ENSMAMG00000000470	lsg1	99	61.970	Mastacembelus_armatus
ENSCSAG00000008796	LSG1	92	63.499	ENSMZEG00005017865	lsg1	99	63.582	Maylandia_zebra
ENSCSAG00000008796	LSG1	81	66.269	ENSMGAG00000007050	LSG1	99	65.758	Meleagris_gallopavo
ENSCSAG00000008796	LSG1	84	81.592	ENSMAUG00000016976	Lsg1	93	81.924	Mesocricetus_auratus
ENSCSAG00000008796	LSG1	92	87.253	ENSMICG00000049087	LSG1	100	87.253	Microcebus_murinus
ENSCSAG00000008796	LSG1	92	81.269	ENSMOCG00000022136	Lsg1	100	80.665	Microtus_ochrogaster
ENSCSAG00000008796	LSG1	76	73.179	ENSMMOG00000008884	lsg1	99	68.788	Mola_mola
ENSCSAG00000008796	LSG1	91	59.153	ENSMODG00000019828	LSG1	99	58.584	Monodelphis_domestica
ENSCSAG00000008796	LSG1	92	82.067	MGP_CAROLIEiJ_G0020648	Lsg1	100	82.246	Mus_caroli
ENSCSAG00000008796	LSG1	92	82.371	ENSMUSG00000022538	Lsg1	100	82.549	Mus_musculus
ENSCSAG00000008796	LSG1	90	82.562	MGP_PahariEiJ_G0016352	Lsg1	100	82.727	Mus_pahari
ENSCSAG00000008796	LSG1	92	82.371	MGP_SPRETEiJ_G0021544	Lsg1	100	82.549	Mus_spretus
ENSCSAG00000008796	LSG1	92	84.954	ENSMPUG00000003734	LSG1	99	84.954	Mustela_putorius_furo
ENSCSAG00000008796	LSG1	92	86.495	ENSMLUG00000012548	LSG1	99	86.495	Myotis_lucifugus
ENSCSAG00000008796	LSG1	92	81.791	ENSNGAG00000021872	Lsg1	100	80.273	Nannospalax_galili
ENSCSAG00000008796	LSG1	92	96.809	ENSNLEG00000008293	LSG1	100	96.809	Nomascus_leucogenys
ENSCSAG00000008796	LSG1	63	70.225	ENSMEUG00000009041	-	82	70.175	Notamacropus_eugenii
ENSCSAG00000008796	LSG1	92	63.008	ENSONIG00000002635	lsg1	99	63.407	Oreochromis_niloticus
ENSCSAG00000008796	LSG1	87	72.930	ENSOANG00000012742	LSG1	99	71.975	Ornithorhynchus_anatinus
ENSCSAG00000008796	LSG1	92	86.950	ENSOCUG00000004817	LSG1	100	86.950	Oryctolagus_cuniculus
ENSCSAG00000008796	LSG1	90	63.509	ENSORLG00000007695	lsg1	99	63.775	Oryzias_latipes
ENSCSAG00000008796	LSG1	90	63.509	ENSORLG00020016286	lsg1	99	63.166	Oryzias_latipes_hni
ENSCSAG00000008796	LSG1	90	63.975	ENSORLG00015012025	lsg1	99	63.623	Oryzias_latipes_hsok
ENSCSAG00000008796	LSG1	90	62.791	ENSOMEG00000022379	lsg1	99	63.142	Oryzias_melastigma
ENSCSAG00000008796	LSG1	92	86.858	ENSOGAG00000003475	LSG1	100	86.858	Otolemur_garnettii
ENSCSAG00000008796	LSG1	92	83.460	ENSOARG00000020403	LSG1	99	83.612	Ovis_aries
ENSCSAG00000008796	LSG1	92	95.441	ENSPPAG00000029271	LSG1	100	95.441	Pan_paniscus
ENSCSAG00000008796	LSG1	92	85.714	ENSPPRG00000010281	LSG1	99	85.714	Panthera_pardus
ENSCSAG00000008796	LSG1	92	86.474	ENSPTIG00000010789	LSG1	99	86.474	Panthera_tigris_altaica
ENSCSAG00000008796	LSG1	92	95.441	ENSPTRG00000015760	LSG1	100	95.441	Pan_troglodytes
ENSCSAG00000008796	LSG1	100	98.326	ENSPANG00000018249	LSG1	100	98.326	Papio_anubis
ENSCSAG00000008796	LSG1	88	65.415	ENSPKIG00000002895	lsg1	100	64.458	Paramormyrops_kingsleyae
ENSCSAG00000008796	LSG1	88	65.679	ENSPSIG00000009821	LSG1	99	65.055	Pelodiscus_sinensis
ENSCSAG00000008796	LSG1	87	65.605	ENSPMGG00000000931	lsg1	99	65.287	Periophthalmus_magnuspinnatus
ENSCSAG00000008796	LSG1	92	82.477	ENSPEMG00000012082	-	100	82.175	Peromyscus_maniculatus_bairdii
ENSCSAG00000008796	LSG1	92	60.646	ENSPMAG00000007451	lsg1	99	60.352	Petromyzon_marinus
ENSCSAG00000008796	LSG1	92	67.188	ENSPCIG00000013890	LSG1	82	67.188	Phascolarctos_cinereus
ENSCSAG00000008796	LSG1	89	66.462	ENSPFOG00000021882	lsg1	99	66.316	Poecilia_formosa
ENSCSAG00000008796	LSG1	89	65.231	ENSPLAG00000019536	lsg1	99	65.766	Poecilia_latipinna
ENSCSAG00000008796	LSG1	89	65.644	ENSPMEG00000017281	lsg1	99	65.517	Poecilia_mexicana
ENSCSAG00000008796	LSG1	89	55.188	ENSPREG00000006048	lsg1	99	56.130	Poecilia_reticulata
ENSCSAG00000008796	LSG1	85	95.717	ENSPPYG00000014425	LSG1	100	94.728	Pongo_abelii
ENSCSAG00000008796	LSG1	82	85.333	ENSPCAG00000005511	LSG1	90	85.333	Procavia_capensis
ENSCSAG00000008796	LSG1	92	88.923	ENSPCOG00000012360	LSG1	100	88.923	Propithecus_coquereli
ENSCSAG00000008796	LSG1	92	63.939	ENSPNYG00000021994	lsg1	99	63.897	Pundamilia_nyererei
ENSCSAG00000008796	LSG1	92	65.813	ENSPNAG00000015533	lsg1	99	65.554	Pygocentrus_nattereri
ENSCSAG00000008796	LSG1	92	82.805	ENSRNOG00000001727	Lsg1	100	82.805	Rattus_norvegicus
ENSCSAG00000008796	LSG1	92	97.720	ENSRBIG00000029053	LSG1	100	97.720	Rhinopithecus_bieti
ENSCSAG00000008796	LSG1	92	97.720	ENSRROG00000037702	LSG1	100	97.720	Rhinopithecus_roxellana
ENSCSAG00000008796	LSG1	68	46.552	YGL099W	LSG1	68	58.683	Saccharomyces_cerevisiae
ENSCSAG00000008796	LSG1	92	94.225	ENSSBOG00000034938	LSG1	100	94.225	Saimiri_boliviensis_boliviensis
ENSCSAG00000008796	LSG1	72	67.424	ENSSHAG00000003487	LSG1	99	66.603	Sarcophilus_harrisii
ENSCSAG00000008796	LSG1	90	65.015	ENSSFOG00015008955	lsg1	99	63.293	Scleropages_formosus
ENSCSAG00000008796	LSG1	90	64.087	ENSSDUG00000004622	lsg1	99	63.757	Seriola_dumerili
ENSCSAG00000008796	LSG1	90	63.777	ENSSLDG00000010869	lsg1	99	64.286	Seriola_lalandi_dorsalis
ENSCSAG00000008796	LSG1	74	84.118	ENSSARG00000012981	LSG1	81	84.118	Sorex_araneus
ENSCSAG00000008796	LSG1	92	67.417	ENSSPUG00000016347	LSG1	99	67.016	Sphenodon_punctatus
ENSCSAG00000008796	LSG1	92	62.879	ENSSPAG00000005508	lsg1	99	63.333	Stegastes_partitus
ENSCSAG00000008796	LSG1	92	84.954	ENSSSCG00000011827	LSG1	99	84.195	Sus_scrofa
ENSCSAG00000008796	LSG1	81	64.370	ENSTGUG00000009068	LSG1	99	63.866	Taeniopygia_guttata
ENSCSAG00000008796	LSG1	89	61.466	ENSTRUG00000017380	lsg1	99	59.939	Takifugu_rubripes
ENSCSAG00000008796	LSG1	89	64.806	ENSTNIG00000015570	lsg1	99	63.746	Tetraodon_nigroviridis
ENSCSAG00000008796	LSG1	92	77.997	ENSTTRG00000000559	LSG1	99	77.086	Tursiops_truncatus
ENSCSAG00000008796	LSG1	92	84.195	ENSUAMG00000012454	LSG1	99	84.195	Ursus_americanus
ENSCSAG00000008796	LSG1	92	84.195	ENSUMAG00000000855	LSG1	99	84.195	Ursus_maritimus
ENSCSAG00000008796	LSG1	87	81.120	ENSVPAG00000012400	LSG1	99	81.120	Vicugna_pacos
ENSCSAG00000008796	LSG1	87	84.480	ENSVVUG00000008956	LSG1	97	84.480	Vulpes_vulpes
ENSCSAG00000008796	LSG1	92	66.015	ENSXETG00000003451	lsg1	99	66.052	Xenopus_tropicalis
ENSCSAG00000008796	LSG1	89	65.131	ENSXCOG00000003239	lsg1	99	65.015	Xiphophorus_couchianus
ENSCSAG00000008796	LSG1	89	65.265	ENSXMAG00000005536	lsg1	99	65.158	Xiphophorus_maculatus