EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAG00000008878 (Gene tree)
Gene ID
103237588
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Chlorocebus_sabaeus
Status
putative
Strand
Minus strand
Length
8074 bases
Position
chr8:138034395-138042468
Accession
103237588
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAP00000005138RRM_1PF00076.221.2e-4312
ENSCSAP00000005138RRM_1PF00076.221.2e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAT00000006944PUF60-2011930XM_008001825ENSCSAP00000005138516 (aa)XP_008000016A0A0D9R949
Gene Model
Click here to download ENSCSAG00000008878's gene model file
Pathways
Pathway IDPathway NameSource
csab03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000008878's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAG00000008878PUF605235.294ENSCSAG00000001722U2AF26137.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAG00000008878PUF60100100.000ENSG00000179950PUF60100100.000Homo_sapiens
ENSCSAG00000008878PUF6010086.180ENSAPOG00000001713puf60b9886.180Acanthochromis_polyacanthus
ENSCSAG00000008878PUF6010097.481ENSAMEG00000006406PUF609297.481Ailuropoda_melanoleuca
ENSCSAG00000008878PUF6010085.413ENSACIG00000021705puf60b10085.413Amphilophus_citrinellus
ENSCSAG00000008878PUF6010077.159ENSACIG00000003263-9977.586Amphilophus_citrinellus
ENSCSAG00000008878PUF6010081.923ENSAOCG00000015558-9782.500Amphiprion_ocellaris
ENSCSAG00000008878PUF6010086.180ENSAOCG00000005395puf60b10086.180Amphiprion_ocellaris
ENSCSAG00000008878PUF6010080.614ENSAPEG00000011923puf60b9780.614Amphiprion_percula
ENSCSAG00000008878PUF6010072.553ENSAPEG00000001836-9974.004Amphiprion_percula
ENSCSAG00000008878PUF6010081.503ENSATEG00000006303-9881.888Anabas_testudineus
ENSCSAG00000008878PUF6010085.988ENSATEG00000001730puf60b9885.988Anabas_testudineus
ENSCSAG00000008878PUF6010098.256ENSAPLG00000010150PUF609998.256Anas_platyrhynchos
ENSCSAG00000008878PUF6010096.917ENSACAG00000001645PUF609696.917Anolis_carolinensis
ENSCSAG00000008878PUF6010099.612ENSANAG00000018626PUF6010099.612Aotus_nancymaae
ENSCSAG00000008878PUF6010085.413ENSACLG00000004462puf60b10085.413Astatotilapia_calliptera
ENSCSAG00000008878PUF6010076.449ENSAMXG00000041030puf60b10076.735Astyanax_mexicanus
ENSCSAG00000008878PUF6010084.934ENSAMXG00000036570puf60a10081.455Astyanax_mexicanus
ENSCSAG00000008878PUF6010099.225ENSBTAG00000037493PUF609899.225Bos_taurus
ENSCSAG00000008878PUF608250.162WBGene00004389rnp-68351.485Caenorhabditis_elegans
ENSCSAG00000008878PUF6010099.806ENSCJAG00000021485PUF609799.806Callithrix_jacchus
ENSCSAG00000008878PUF6010099.225ENSCAFG00000001400PUF609299.225Canis_familiaris
ENSCSAG00000008878PUF6010099.612ENSCAFG00020018754PUF609799.612Canis_lupus_dingo
ENSCSAG00000008878PUF6010099.225ENSCHIG00000001618PUF608699.225Capra_hircus
ENSCSAG00000008878PUF6010099.612ENSTSYG00000011912PUF6010099.612Carlito_syrichta
ENSCSAG00000008878PUF6010093.462ENSCPOG00000014613PUF609393.462Cavia_porcellus
ENSCSAG00000008878PUF6010099.612ENSCCAG00000007744PUF609799.612Cebus_capucinus
ENSCSAG00000008878PUF60100100.000ENSCATG00000035405PUF6097100.000Cercocebus_atys
ENSCSAG00000008878PUF6010099.419ENSCLAG00000009154PUF609199.419Chinchilla_lanigera
ENSCSAG00000008878PUF6010098.256ENSCPBG00000005595PUF609798.256Chrysemys_picta_bellii
ENSCSAG00000008878PUF606459.882ENSCING00000002156-8759.882Ciona_intestinalis
ENSCSAG00000008878PUF609849.237ENSCING00000008436-9549.708Ciona_intestinalis
ENSCSAG00000008878PUF609749.109ENSCSAVG00000004765-9749.304Ciona_savignyi
ENSCSAG00000008878PUF609755.364ENSCSAVG00000001385-9955.000Ciona_savignyi
ENSCSAG00000008878PUF6081100.000ENSCANG00000041843PUF60100100.000Colobus_angolensis_palliatus
ENSCSAG00000008878PUF6010098.837ENSCGRG00001017442Puf609198.837Cricetulus_griseus_chok1gshd
ENSCSAG00000008878PUF6010098.837ENSCGRG00000003717Puf609298.837Cricetulus_griseus_crigri
ENSCSAG00000008878PUF6010085.221ENSCSEG00000019887puf60b9185.029Cynoglossus_semilaevis
ENSCSAG00000008878PUF6010072.467ENSCSEG00000014845-8974.761Cynoglossus_semilaevis
ENSCSAG00000008878PUF609179.789ENSCVAG00000001560-9879.536Cyprinodon_variegatus
ENSCSAG00000008878PUF6010084.645ENSCVAG00000009386puf60b10085.797Cyprinodon_variegatus
ENSCSAG00000008878PUF6010087.146ENSDARG00000032175puf60a9994.043Danio_rerio
ENSCSAG00000008878PUF6010078.759ENSDARG00000001241puf60b9996.032Danio_rerio
ENSCSAG00000008878PUF609883.826ENSDNOG00000043278PUF609083.826Dasypus_novemcinctus
ENSCSAG00000008878PUF6010099.225ENSDORG00000004585Puf609499.225Dipodomys_ordii
ENSCSAG00000008878PUF609748.797FBgn0028577hfp9946.263Drosophila_melanogaster
ENSCSAG00000008878PUF6010061.017ENSEBUG00000014291puf60b8464.384Eptatretus_burgeri
ENSCSAG00000008878PUF609869.841ENSEBUG00000005470-8869.583Eptatretus_burgeri
ENSCSAG00000008878PUF6010099.612ENSEASG00005009695PUF609799.612Equus_asinus_asinus
ENSCSAG00000008878PUF6010099.612ENSECAG00000024681PUF609699.612Equus_caballus
ENSCSAG00000008878PUF6010085.687ENSELUG00000018443-9885.687Esox_lucius
ENSCSAG00000008878PUF6010084.038ENSELUG00000006507puf60b9980.220Esox_lucius
ENSCSAG00000008878PUF6010099.225ENSFCAG00000001045PUF6010099.225Felis_catus
ENSCSAG00000008878PUF6010085.465ENSFALG00000001136PUF609786.628Ficedula_albicollis
ENSCSAG00000008878PUF6010099.225ENSFDAG00000017177PUF609199.225Fukomys_damarensis
ENSCSAG00000008878PUF6010084.837ENSFHEG00000020046puf60b10085.988Fundulus_heteroclitus
ENSCSAG00000008878PUF609679.116ENSFHEG00000021687PUF6010079.959Fundulus_heteroclitus
ENSCSAG00000008878PUF6010071.673ENSGMOG00000006392puf60b9970.913Gadus_morhua
ENSCSAG00000008878PUF606797.965ENSGALG00000039901PUF609497.965Gallus_gallus
ENSCSAG00000008878PUF6010084.261ENSGAFG00000021040puf60b10085.413Gambusia_affinis
ENSCSAG00000008878PUF6010079.344ENSGAFG00000004334-9978.764Gambusia_affinis
ENSCSAG00000008878PUF6010070.600ENSGACG00000001484-10069.231Gasterosteus_aculeatus
ENSCSAG00000008878PUF6010073.805ENSGACG00000004717puf60b9773.129Gasterosteus_aculeatus
ENSCSAG00000008878PUF6010098.256ENSGAGG00000013289PUF609198.256Gopherus_agassizii
ENSCSAG00000008878PUF60100100.000ENSGGOG00000004646PUF6097100.000Gorilla_gorilla
ENSCSAG00000008878PUF6010082.342ENSHBUG00000009634-9882.342Haplochromis_burtoni
ENSCSAG00000008878PUF6010085.413ENSHBUG00000015118puf60b10085.413Haplochromis_burtoni
ENSCSAG00000008878PUF6010099.225ENSHGLG00000006111PUF609199.225Heterocephalus_glaber_female
ENSCSAG00000008878PUF6010099.225ENSHGLG00100012362PUF609199.225Heterocephalus_glaber_male
ENSCSAG00000008878PUF609866.601ENSHCOG00000000378-9964.850Hippocampus_comes
ENSCSAG00000008878PUF6010082.255ENSHCOG00000015541puf60b9981.852Hippocampus_comes
ENSCSAG00000008878PUF6010078.571ENSIPUG00000004660puf60b9978.343Ictalurus_punctatus
ENSCSAG00000008878PUF6010082.420ENSIPUG00000002453puf60a9982.798Ictalurus_punctatus
ENSCSAG00000008878PUF6010099.419ENSSTOG00000025037PUF609299.419Ictidomys_tridecemlineatus
ENSCSAG00000008878PUF6010099.031ENSJJAG00000001076Puf609299.031Jaculus_jaculus
ENSCSAG00000008878PUF6010078.261ENSKMAG00000010106-10075.746Kryptolebias_marmoratus
ENSCSAG00000008878PUF6010084.837ENSKMAG00000016745puf60b10085.988Kryptolebias_marmoratus
ENSCSAG00000008878PUF6010083.493ENSLBEG00000012505puf60b10083.493Labrus_bergylta
ENSCSAG00000008878PUF607091.185ENSLACG00000005456PUF609990.909Latimeria_chalumnae
ENSCSAG00000008878PUF6010091.137ENSLOCG00000010106puf60b9889.981Lepisosteus_oculatus
ENSCSAG00000008878PUF6010098.062ENSLAFG00000022929PUF609398.062Loxodonta_africana
ENSCSAG00000008878PUF60100100.000ENSMFAG00000043373PUF6098100.000Macaca_fascicularis
ENSCSAG00000008878PUF60100100.000ENSMMUG00000013558PUF6097100.000Macaca_mulatta
ENSCSAG00000008878PUF60100100.000ENSMNEG00000031099PUF6097100.000Macaca_nemestrina
ENSCSAG00000008878PUF60100100.000ENSMLEG00000040009PUF60100100.000Mandrillus_leucophaeus
ENSCSAG00000008878PUF6010083.109ENSMAMG00000019476-9882.726Mastacembelus_armatus
ENSCSAG00000008878PUF6010085.797ENSMAMG00000010394puf60b10083.551Mastacembelus_armatus
ENSCSAG00000008878PUF6010085.413ENSMZEG00005018515puf60b10085.413Maylandia_zebra
ENSCSAG00000008878PUF6010082.534ENSMZEG00005019425-9882.534Maylandia_zebra
ENSCSAG00000008878PUF6010098.256ENSMGAG00000013070PUF609798.256Meleagris_gallopavo
ENSCSAG00000008878PUF607098.889ENSMAUG00000014267-8898.889Mesocricetus_auratus
ENSCSAG00000008878PUF609680.361ENSMAUG00000018549-9580.361Mesocricetus_auratus
ENSCSAG00000008878PUF6010099.612ENSMICG00000012226PUF609899.612Microcebus_murinus
ENSCSAG00000008878PUF6010099.031ENSMOCG00000018780Puf609299.031Microtus_ochrogaster
ENSCSAG00000008878PUF6010085.605ENSMMOG00000004217puf60b10085.605Mola_mola
ENSCSAG00000008878PUF6010073.308ENSMMOG00000018059-9976.484Mola_mola
ENSCSAG00000008878PUF6010098.837ENSMODG00000009161PUF609398.837Monodelphis_domestica
ENSCSAG00000008878PUF6010078.311ENSMALG00000006797puf60b9778.311Monopterus_albus
ENSCSAG00000008878PUF6010081.190ENSMALG00000000200-9879.771Monopterus_albus
ENSCSAG00000008878PUF6010098.837MGP_CAROLIEiJ_G0019910Puf609198.837Mus_caroli
ENSCSAG00000008878PUF6010098.837ENSMUSG00000002524Puf609198.837Mus_musculus
ENSCSAG00000008878PUF6010098.837MGP_PahariEiJ_G0019920Puf609198.837Mus_pahari
ENSCSAG00000008878PUF6010098.837MGP_SPRETEiJ_G0020812Puf609198.837Mus_spretus
ENSCSAG00000008878PUF6010099.225ENSMPUG00000008137PUF609199.225Mustela_putorius_furo
ENSCSAG00000008878PUF6010098.450ENSMLUG00000000238-9298.450Myotis_lucifugus
ENSCSAG00000008878PUF6010091.860ENSMLUG00000013032-9791.860Myotis_lucifugus
ENSCSAG00000008878PUF6010099.031ENSNGAG00000000712Puf6010099.031Nannospalax_galili
ENSCSAG00000008878PUF6010082.726ENSNBRG00000017223-9882.692Neolamprologus_brichardi
ENSCSAG00000008878PUF608382.805ENSNBRG00000013047puf60b9784.235Neolamprologus_brichardi
ENSCSAG00000008878PUF60100100.000ENSNLEG00000002156PUF6097100.000Nomascus_leucogenys
ENSCSAG00000008878PUF607599.659ENSOPRG00000002147PUF607599.659Ochotona_princeps
ENSCSAG00000008878PUF6072100.000ENSODEG00000014024-89100.000Octodon_degus
ENSCSAG00000008878PUF609873.964ENSODEG00000015513-9672.340Octodon_degus
ENSCSAG00000008878PUF6010085.413ENSONIG00000006247puf60b9785.413Oreochromis_niloticus
ENSCSAG00000008878PUF6010082.726ENSONIG00000014030-9782.726Oreochromis_niloticus
ENSCSAG00000008878PUF609778.020ENSOANG00000006962PUF609778.218Ornithorhynchus_anatinus
ENSCSAG00000008878PUF6010085.221ENSORLG00000012279puf60b10084.837Oryzias_latipes
ENSCSAG00000008878PUF609978.598ENSORLG00000028655-9978.707Oryzias_latipes
ENSCSAG00000008878PUF609979.198ENSORLG00020018144-9779.310Oryzias_latipes_hni
ENSCSAG00000008878PUF6010085.221ENSORLG00020007333puf6010084.837Oryzias_latipes_hni
ENSCSAG00000008878PUF609979.198ENSORLG00015016833-9779.310Oryzias_latipes_hsok
ENSCSAG00000008878PUF6010084.321ENSORLG00015007718puf60b10084.704Oryzias_latipes_hsok
ENSCSAG00000008878PUF609980.230ENSOMEG00000022185-9780.230Oryzias_melastigma
ENSCSAG00000008878PUF6010082.895ENSOMEG00000001643puf60b9983.030Oryzias_melastigma
ENSCSAG00000008878PUF6010099.419ENSOGAG00000006259PUF609299.419Otolemur_garnettii
ENSCSAG00000008878PUF6010096.705ENSOARG00000016235PUF609796.705Ovis_aries
ENSCSAG00000008878PUF60100100.000ENSPPAG00000029933PUF6097100.000Pan_paniscus
ENSCSAG00000008878PUF6010099.225ENSPPRG00000003257PUF6010099.225Panthera_pardus
ENSCSAG00000008878PUF6010096.899ENSPTIG00000009795PUF609896.899Panthera_tigris_altaica
ENSCSAG00000008878PUF6010099.806ENSPTRG00000043963-9799.806Pan_troglodytes
ENSCSAG00000008878PUF6010099.806ENSPTRG00000020670PUF609799.806Pan_troglodytes
ENSCSAG00000008878PUF60100100.000ENSPANG00000021936PUF6097100.000Papio_anubis
ENSCSAG00000008878PUF6010087.885ENSPKIG00000012204puf60b10087.885Paramormyrops_kingsleyae
ENSCSAG00000008878PUF6010086.424ENSPKIG00000004295puf60a9992.059Paramormyrops_kingsleyae
ENSCSAG00000008878PUF6010098.062ENSPSIG00000004679PUF609898.062Pelodiscus_sinensis
ENSCSAG00000008878PUF6010084.351ENSPMGG00000013444puf60b9984.351Periophthalmus_magnuspinnatus
ENSCSAG00000008878PUF6010099.031ENSPEMG00000008820Puf609299.031Peromyscus_maniculatus_bairdii
ENSCSAG00000008878PUF6010099.419ENSPCIG00000020270PUF609899.419Phascolarctos_cinereus
ENSCSAG00000008878PUF6010084.837ENSPFOG00000019217puf60b9882.726Poecilia_formosa
ENSCSAG00000008878PUF6010080.732ENSPFOG00000011118-9781.081Poecilia_formosa
ENSCSAG00000008878PUF6010080.732ENSPLAG00000017025-9080.695Poecilia_latipinna
ENSCSAG00000008878PUF6010084.837ENSPLAG00000010754puf60b10085.988Poecilia_latipinna
ENSCSAG00000008878PUF6010080.732ENSPMEG00000009767-9081.081Poecilia_mexicana
ENSCSAG00000008878PUF6010084.837ENSPMEG00000000838puf60b10085.988Poecilia_mexicana
ENSCSAG00000008878PUF6010082.056ENSPREG00000005440puf60b9883.936Poecilia_reticulata
ENSCSAG00000008878PUF608198.321ENSPPYG00000018951-9598.321Pongo_abelii
ENSCSAG00000008878PUF608199.281ENSPCAG00000014837PUF6010099.281Procavia_capensis
ENSCSAG00000008878PUF6010099.419ENSPCOG00000027981PUF609899.419Propithecus_coquereli
ENSCSAG00000008878PUF60100100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSCSAG00000008878PUF6010085.413ENSPNYG00000002556puf60b10085.413Pundamilia_nyererei
ENSCSAG00000008878PUF6010082.534ENSPNYG00000004273-9882.534Pundamilia_nyererei
ENSCSAG00000008878PUF6010077.927ENSPNAG00000019415puf60b8977.457Pygocentrus_nattereri
ENSCSAG00000008878PUF6010083.174ENSPNAG00000019909puf60a9982.824Pygocentrus_nattereri
ENSCSAG00000008878PUF6010098.837ENSRNOG00000009960Puf609298.837Rattus_norvegicus
ENSCSAG00000008878PUF60100100.000ENSRBIG00000035274PUF6097100.000Rhinopithecus_bieti
ENSCSAG00000008878PUF60100100.000ENSRROG00000029360PUF6098100.000Rhinopithecus_roxellana
ENSCSAG00000008878PUF6010098.450ENSSBOG00000027089PUF609798.450Saimiri_boliviensis_boliviensis
ENSCSAG00000008878PUF609098.707ENSSHAG00000006668PUF608998.707Sarcophilus_harrisii
ENSCSAG00000008878PUF6010081.868ENSSFOG00015019371puf60a9886.922Scleropages_formosus
ENSCSAG00000008878PUF609686.235ENSSFOG00015019619puf60b9986.235Scleropages_formosus
ENSCSAG00000008878PUF607394.224ENSSMAG00000016381puf60b7294.224Scophthalmus_maximus
ENSCSAG00000008878PUF609980.888ENSSDUG00000007048-9781.081Seriola_dumerili
ENSCSAG00000008878PUF6010084.211ENSSDUG00000009935puf60b9984.242Seriola_dumerili
ENSCSAG00000008878PUF6010085.988ENSSLDG00000024011puf60b10083.738Seriola_lalandi_dorsalis
ENSCSAG00000008878PUF6010080.228ENSSLDG00000007366-9980.645Seriola_lalandi_dorsalis
ENSCSAG00000008878PUF606784.971ENSSPUG00000013518PUF609484.971Sphenodon_punctatus
ENSCSAG00000008878PUF6010083.364ENSSPAG00000012144puf60b10083.925Stegastes_partitus
ENSCSAG00000008878PUF6010081.870ENSSPAG00000020285-10082.443Stegastes_partitus
ENSCSAG00000008878PUF6010099.225ENSSSCG00000038800PUF6010093.817Sus_scrofa
ENSCSAG00000008878PUF6010094.961ENSTGUG00000012797-9994.961Taeniopygia_guttata
ENSCSAG00000008878PUF6010077.519ENSTRUG00000008843-10077.519Takifugu_rubripes
ENSCSAG00000008878PUF6010084.837ENSTRUG00000005420puf60b10082.617Takifugu_rubripes
ENSCSAG00000008878PUF6010078.488ENSTNIG00000003069-9978.488Tetraodon_nigroviridis
ENSCSAG00000008878PUF6010084.837ENSTNIG00000013675puf60b9984.645Tetraodon_nigroviridis
ENSCSAG00000008878PUF606295.608ENSTBEG00000002751-9995.593Tupaia_belangeri
ENSCSAG00000008878PUF608181.214ENSTBEG00000001899-10081.503Tupaia_belangeri
ENSCSAG00000008878PUF6010098.643ENSTTRG00000017088PUF6010098.643Tursiops_truncatus
ENSCSAG00000008878PUF6010099.612ENSUAMG00000024917PUF609799.612Ursus_americanus
ENSCSAG00000008878PUF6010094.767ENSUMAG00000000272PUF609294.767Ursus_maritimus
ENSCSAG00000008878PUF6010099.612ENSVVUG00000022527PUF6010099.612Vulpes_vulpes
ENSCSAG00000008878PUF6010094.380ENSXETG00000012469puf609794.380Xenopus_tropicalis
ENSCSAG00000008878PUF6010081.574ENSXCOG00000012355puf60b10082.726Xiphophorus_couchianus
ENSCSAG00000008878PUF6010078.378ENSXMAG00000010507-9877.606Xiphophorus_maculatus
ENSCSAG00000008878PUF6010084.837ENSXMAG00000001862puf60b10085.988Xiphophorus_maculatus

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