EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000009037 (Gene tree)
Gene ID: 103228069
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 9422 bases
Position: chr22:51616803-51626224
Accession: 103228069
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000005288	MBD	PF01429.19	1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000007102	MBD4-201	2138	XM_007985384	ENSCSAP00000005288	572 (aa)	XP_007983575	A0A0D9R9J9

Gene Model

Click here to download ENSCSAG00000009037's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000009037's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000009037	MBD4	100	93.217	ENSG00000129071	MBD4	100	93.217	Homo_sapiens
ENSCSAG00000009037	MBD4	99	75.563	ENSAMEG00000004562	MBD4	99	75.563	Ailuropoda_melanoleuca
ENSCSAG00000009037	MBD4	52	59.916	ENSAOCG00000001157	mbd4	62	59.916	Amphiprion_ocellaris
ENSCSAG00000009037	MBD4	99	70.855	ENSBTAG00000021645	MBD4	100	70.855	Bos_taurus
ENSCSAG00000009037	MBD4	100	85.665	ENSCJAG00000017293	MBD4	100	85.665	Callithrix_jacchus
ENSCSAG00000009037	MBD4	99	76.042	ENSCAFG00000004867	MBD4	99	76.042	Canis_familiaris
ENSCSAG00000009037	MBD4	99	76.042	ENSCAFG00020007082	MBD4	99	76.042	Canis_lupus_dingo
ENSCSAG00000009037	MBD4	99	69.983	ENSCHIG00000009760	MBD4	100	69.983	Capra_hircus
ENSCSAG00000009037	MBD4	100	87.392	ENSCCAG00000029796	MBD4	100	87.392	Cebus_capucinus
ENSCSAG00000009037	MBD4	100	98.252	ENSCATG00000035211	MBD4	100	98.252	Cercocebus_atys
ENSCSAG00000009037	MBD4	96	70.197	ENSCLAG00000008974	MBD4	98	69.838	Chinchilla_lanigera
ENSCSAG00000009037	MBD4	87	50.958	ENSCPBG00000014704	MBD4	89	50.672	Chrysemys_picta_bellii
ENSCSAG00000009037	MBD4	100	96.853	ENSCANG00000007120	MBD4	100	96.853	Colobus_angolensis_palliatus
ENSCSAG00000009037	MBD4	99	68.182	ENSCGRG00001003507	Mbd4	100	68.182	Cricetulus_griseus_chok1gshd
ENSCSAG00000009037	MBD4	99	68.182	ENSCGRG00000010974	Mbd4	100	68.182	Cricetulus_griseus_crigri
ENSCSAG00000009037	MBD4	99	76.182	ENSDNOG00000049619	MBD4	100	76.182	Dasypus_novemcinctus
ENSCSAG00000009037	MBD4	80	63.383	ENSDORG00000000902	-	95	63.383	Dipodomys_ordii
ENSCSAG00000009037	MBD4	54	50.000	ENSEBUG00000010816	mbd4	73	50.000	Eptatretus_burgeri
ENSCSAG00000009037	MBD4	99	78.185	ENSEASG00005014800	MBD4	100	78.185	Equus_asinus_asinus
ENSCSAG00000009037	MBD4	99	78.185	ENSECAG00000022106	MBD4	100	78.185	Equus_caballus
ENSCSAG00000009037	MBD4	90	61.714	ENSEEUG00000011459	MBD4	93	62.897	Erinaceus_europaeus
ENSCSAG00000009037	MBD4	99	76.817	ENSFCAG00000000083	MBD4	99	76.817	Felis_catus
ENSCSAG00000009037	MBD4	81	46.029	ENSFALG00000013663	MBD4	99	46.047	Ficedula_albicollis
ENSCSAG00000009037	MBD4	87	51.336	ENSGAGG00000018644	MBD4	89	51.341	Gopherus_agassizii
ENSCSAG00000009037	MBD4	100	91.566	ENSGGOG00000010698	MBD4	100	91.566	Gorilla_gorilla
ENSCSAG00000009037	MBD4	96	72.531	ENSHGLG00000009034	MBD4	98	72.531	Heterocephalus_glaber_female
ENSCSAG00000009037	MBD4	96	72.531	ENSHGLG00100000135	MBD4	98	72.531	Heterocephalus_glaber_male
ENSCSAG00000009037	MBD4	99	72.583	ENSSTOG00000020663	MBD4	100	72.583	Ictidomys_tridecemlineatus
ENSCSAG00000009037	MBD4	99	74.523	ENSLAFG00000010609	MBD4	99	74.523	Loxodonta_africana
ENSCSAG00000009037	MBD4	100	97.552	ENSMFAG00000002266	MBD4	100	97.552	Macaca_fascicularis
ENSCSAG00000009037	MBD4	100	95.517	ENSMMUG00000012723	MBD4	100	95.517	Macaca_mulatta
ENSCSAG00000009037	MBD4	96	97.263	ENSMNEG00000029752	MBD4	99	97.263	Macaca_nemestrina
ENSCSAG00000009037	MBD4	100	98.077	ENSMLEG00000024859	MBD4	100	98.077	Mandrillus_leucophaeus
ENSCSAG00000009037	MBD4	100	79.793	ENSMICG00000008022	MBD4	100	79.793	Microcebus_murinus
ENSCSAG00000009037	MBD4	68	50.761	ENSMOCG00000002466	-	97	50.254	Microtus_ochrogaster
ENSCSAG00000009037	MBD4	86	59.363	ENSMODG00000006399	-	99	58.964	Monodelphis_domestica
ENSCSAG00000009037	MBD4	99	66.841	MGP_CAROLIEiJ_G0028760	Mbd4	100	66.841	Mus_caroli
ENSCSAG00000009037	MBD4	99	66.492	ENSMUSG00000030322	Mbd4	100	66.492	Mus_musculus
ENSCSAG00000009037	MBD4	99	67.596	MGP_PahariEiJ_G0022511	-	100	67.596	Mus_pahari
ENSCSAG00000009037	MBD4	99	65.969	MGP_SPRETEiJ_G0029788	Mbd4	100	65.969	Mus_spretus
ENSCSAG00000009037	MBD4	99	74.739	ENSMPUG00000017195	MBD4	99	74.869	Mustela_putorius_furo
ENSCSAG00000009037	MBD4	92	79.478	ENSMLUG00000014766	MBD4	97	79.735	Myotis_lucifugus
ENSCSAG00000009037	MBD4	100	91.883	ENSNLEG00000005337	MBD4	100	91.883	Nomascus_leucogenys
ENSCSAG00000009037	MBD4	99	64.421	ENSOPRG00000000473	MBD4	99	64.421	Ochotona_princeps
ENSCSAG00000009037	MBD4	85	42.713	ENSONIG00000017212	mbd4	60	63.445	Oreochromis_niloticus
ENSCSAG00000009037	MBD4	72	46.336	ENSOANG00000004589	-	89	48.718	Ornithorhynchus_anatinus
ENSCSAG00000009037	MBD4	99	67.010	ENSOCUG00000013006	MBD4	100	67.010	Oryctolagus_cuniculus
ENSCSAG00000009037	MBD4	99	75.652	ENSOGAG00000010236	MBD4	100	75.304	Otolemur_garnettii
ENSCSAG00000009037	MBD4	99	70.157	ENSOARG00000014699	MBD4	100	70.157	Ovis_aries
ENSCSAG00000009037	MBD4	100	92.870	ENSPPAG00000036528	MBD4	100	92.870	Pan_paniscus
ENSCSAG00000009037	MBD4	99	76.923	ENSPPRG00000016480	MBD4	99	76.923	Panthera_pardus
ENSCSAG00000009037	MBD4	100	91.738	ENSPTRG00000015377	MBD4	100	91.738	Pan_troglodytes
ENSCSAG00000009037	MBD4	100	96.713	ENSPANG00000015047	MBD4	100	96.713	Papio_anubis
ENSCSAG00000009037	MBD4	86	50.951	ENSPSIG00000007892	MBD4	88	50.951	Pelodiscus_sinensis
ENSCSAG00000009037	MBD4	90	62.261	ENSPEMG00000006226	Mbd4	97	62.261	Peromyscus_maniculatus_bairdii
ENSCSAG00000009037	MBD4	89	58.588	ENSPCIG00000002276	-	98	58.206	Phascolarctos_cinereus
ENSCSAG00000009037	MBD4	100	92.496	ENSPPYG00000013417	MBD4	100	92.496	Pongo_abelii
ENSCSAG00000009037	MBD4	95	70.524	ENSPCAG00000012915	MBD4	99	70.524	Procavia_capensis
ENSCSAG00000009037	MBD4	99	78.683	ENSPVAG00000005238	MBD4	99	78.336	Pteropus_vampyrus
ENSCSAG00000009037	MBD4	99	66.667	ENSRNOG00000010919	Mbd4	100	66.667	Rattus_norvegicus
ENSCSAG00000009037	MBD4	100	97.378	ENSRBIG00000027722	MBD4	100	97.378	Rhinopithecus_bieti
ENSCSAG00000009037	MBD4	100	97.028	ENSRROG00000029136	MBD4	100	97.028	Rhinopithecus_roxellana
ENSCSAG00000009037	MBD4	99	86.806	ENSSBOG00000016810	MBD4	100	86.285	Saimiri_boliviensis_boliviensis
ENSCSAG00000009037	MBD4	93	56.192	ENSSHAG00000012953	MBD4	92	56.579	Sarcophilus_harrisii
ENSCSAG00000009037	MBD4	85	44.071	ENSSFOG00015016292	mbd4	95	43.874	Scleropages_formosus
ENSCSAG00000009037	MBD4	86	44.834	ENSSMAG00000013958	-	68	44.752	Scophthalmus_maximus
ENSCSAG00000009037	MBD4	80	61.588	ENSSARG00000004496	-	80	62.017	Sorex_araneus
ENSCSAG00000009037	MBD4	86	49.119	ENSSPUG00000017344	MBD4	91	49.119	Sphenodon_punctatus
ENSCSAG00000009037	MBD4	99	74.695	ENSSSCG00000033303	MBD4	100	74.695	Sus_scrofa
ENSCSAG00000009037	MBD4	85	40.040	ENSTNIG00000017927	mbd4	58	64.398	Tetraodon_nigroviridis
ENSCSAG00000009037	MBD4	87	60.550	ENSTBEG00000003041	-	86	60.550	Tupaia_belangeri
ENSCSAG00000009037	MBD4	97	76.064	ENSTTRG00000011265	MBD4	100	76.064	Tursiops_truncatus
ENSCSAG00000009037	MBD4	86	78.557	ENSUAMG00000000814	MBD4	99	78.557	Ursus_americanus
ENSCSAG00000009037	MBD4	99	76.265	ENSUMAG00000017542	MBD4	100	76.265	Ursus_maritimus
ENSCSAG00000009037	MBD4	67	74.312	ENSVPAG00000004040	-	70	74.312	Vicugna_pacos
ENSCSAG00000009037	MBD4	99	75.390	ENSVVUG00000014222	MBD4	99	75.521	Vulpes_vulpes