EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000009219 (Gene tree)
Gene ID: 103230895
Gene Symbol: HNRNPU
Alias: C1orf199|FLJ30202|FLJ37978|HNRNPU-AS1|HNRPU|NCRNA00201|SAF-A|hnRNPU
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 12591 bases
Position: chr25:81878111-81890701
Accession: 103230895
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000005471	SAP	PF02037.27	2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000007286	HNRNPU-201	5140	-	ENSCSAP00000005471	806 (aa)	XP_007988201	A0A0D9RA32

Gene Model

Click here to download ENSCSAG00000009219's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000009219's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000009219	HNRNPU	82	48.563	ENSCSAG00000003544	HNRNPUL1	57	52.670

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000009219	HNRNPU	100	99.628	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSCSAG00000009219	HNRNPU	75	56.502	ENSAPOG00000017400	hnrnpub	81	58.887	Acanthochromis_polyacanthus
ENSCSAG00000009219	HNRNPU	100	95.615	ENSAMEG00000009145	HNRNPU	100	95.615	Ailuropoda_melanoleuca
ENSCSAG00000009219	HNRNPU	83	60.066	ENSACIG00000012138	hnrnpub	87	80.952	Amphilophus_citrinellus
ENSCSAG00000009219	HNRNPU	75	56.907	ENSAOCG00000015843	hnrnpub	81	59.196	Amphiprion_ocellaris
ENSCSAG00000009219	HNRNPU	75	56.907	ENSAPEG00000014679	hnrnpub	81	59.196	Amphiprion_percula
ENSCSAG00000009219	HNRNPU	69	61.484	ENSATEG00000016178	hnrnpub	72	60.575	Anabas_testudineus
ENSCSAG00000009219	HNRNPU	80	83.010	ENSACAG00000004511	HNRNPU	72	89.203	Anolis_carolinensis
ENSCSAG00000009219	HNRNPU	100	99.752	ENSANAG00000033895	-	100	99.752	Aotus_nancymaae
ENSCSAG00000009219	HNRNPU	74	59.265	ENSACLG00000008165	hnrnpub	80	57.098	Astatotilapia_calliptera
ENSCSAG00000009219	HNRNPU	98	98.352	ENSBTAG00000007606	HNRNPU	98	98.352	Bos_taurus
ENSCSAG00000009219	HNRNPU	100	97.212	ENSCJAG00000016914	HNRNPU	100	97.212	Callithrix_jacchus
ENSCSAG00000009219	HNRNPU	100	98.387	ENSCAFG00020000918	HNRNPU	100	98.387	Canis_lupus_dingo
ENSCSAG00000009219	HNRNPU	100	98.387	ENSCHIG00000004900	HNRNPU	100	98.387	Capra_hircus
ENSCSAG00000009219	HNRNPU	100	95.273	ENSCPOG00000011887	HNRNPU	100	95.273	Cavia_porcellus
ENSCSAG00000009219	HNRNPU	100	98.139	ENSCCAG00000037859	-	100	98.139	Cebus_capucinus
ENSCSAG00000009219	HNRNPU	100	98.883	ENSCATG00000035273	HNRNPU	100	98.883	Cercocebus_atys
ENSCSAG00000009219	HNRNPU	100	95.515	ENSCLAG00000007100	HNRNPU	100	95.515	Chinchilla_lanigera
ENSCSAG00000009219	HNRNPU	81	100.000	ENSCHOG00000001387	HNRNPU	79	100.000	Choloepus_hoffmanni
ENSCSAG00000009219	HNRNPU	100	77.962	ENSCPBG00000009415	HNRNPU	98	79.826	Chrysemys_picta_bellii
ENSCSAG00000009219	HNRNPU	100	96.936	ENSCANG00000022780	HNRNPU	100	96.936	Colobus_angolensis_palliatus
ENSCSAG00000009219	HNRNPU	100	95.906	ENSCGRG00001020525	Hnrnpu	100	95.906	Cricetulus_griseus_chok1gshd
ENSCSAG00000009219	HNRNPU	70	64.062	ENSCSEG00000010804	hnrnpub	96	60.746	Cynoglossus_semilaevis
ENSCSAG00000009219	HNRNPU	81	71.429	ENSCVAG00000004280	hnrnpub	85	71.429	Cyprinodon_variegatus
ENSCSAG00000009219	HNRNPU	79	85.714	ENSDARG00000004735	hnrnpub	94	57.663	Danio_rerio
ENSCSAG00000009219	HNRNPU	80	62.319	ENSDARG00000015206	hnrnpua	92	59.003	Danio_rerio
ENSCSAG00000009219	HNRNPU	80	100.000	ENSDNOG00000000215	HNRNPU	88	100.000	Dasypus_novemcinctus
ENSCSAG00000009219	HNRNPU	100	92.060	ENSDORG00000015491	Hnrnpu	100	92.184	Dipodomys_ordii
ENSCSAG00000009219	HNRNPU	100	93.548	ENSETEG00000014565	HNRNPU	100	92.928	Echinops_telfairi
ENSCSAG00000009219	HNRNPU	100	97.767	ENSEASG00005003017	HNRNPU	100	97.767	Equus_asinus_asinus
ENSCSAG00000009219	HNRNPU	100	97.519	ENSECAG00000007955	HNRNPU	100	97.519	Equus_caballus
ENSCSAG00000009219	HNRNPU	99	50.184	ENSELUG00000011966	hnrnpua	58	72.727	Esox_lucius
ENSCSAG00000009219	HNRNPU	76	56.941	ENSELUG00000010733	hnrnpub	82	56.533	Esox_lucius
ENSCSAG00000009219	HNRNPU	100	98.387	ENSFCAG00000002156	HNRNPU	99	98.387	Felis_catus
ENSCSAG00000009219	HNRNPU	90	98.822	ENSFDAG00000006026	HNRNPU	100	98.822	Fukomys_damarensis
ENSCSAG00000009219	HNRNPU	75	54.003	ENSFHEG00000022639	hnrnpub	81	55.136	Fundulus_heteroclitus
ENSCSAG00000009219	HNRNPU	74	58.347	ENSGMOG00000001755	hnrnpub	77	60.726	Gadus_morhua
ENSCSAG00000009219	HNRNPU	100	77.922	ENSGALG00000010671	HNRNPU	100	77.049	Gallus_gallus
ENSCSAG00000009219	HNRNPU	75	53.744	ENSGAFG00000009369	hnrnpub	79	55.488	Gambusia_affinis
ENSCSAG00000009219	HNRNPU	77	59.225	ENSGACG00000004679	hnrnpub	99	53.438	Gasterosteus_aculeatus
ENSCSAG00000009219	HNRNPU	100	98.015	ENSGGOG00000004061	HNRNPU	100	98.015	Gorilla_gorilla
ENSCSAG00000009219	HNRNPU	75	57.229	ENSHBUG00000012290	hnrnpub	80	57.098	Haplochromis_burtoni
ENSCSAG00000009219	HNRNPU	100	97.395	ENSHGLG00000010594	-	100	97.395	Heterocephalus_glaber_female
ENSCSAG00000009219	HNRNPU	82	99.160	ENSHGLG00100015093	HNRNPU	100	99.160	Heterocephalus_glaber_male
ENSCSAG00000009219	HNRNPU	74	52.493	ENSHCOG00000020091	hnrnpub	78	54.012	Hippocampus_comes
ENSCSAG00000009219	HNRNPU	72	78.261	ENSIPUG00000007749	hnrnpu	92	72.549	Ictalurus_punctatus
ENSCSAG00000009219	HNRNPU	100	94.196	ENSJJAG00000011371	Hnrnpu	100	94.196	Jaculus_jaculus
ENSCSAG00000009219	HNRNPU	75	54.665	ENSKMAG00000004532	hnrnpub	80	56.012	Kryptolebias_marmoratus
ENSCSAG00000009219	HNRNPU	75	55.721	ENSLBEG00000022520	hnrnpub	80	57.604	Labrus_bergylta
ENSCSAG00000009219	HNRNPU	99	62.408	ENSLACG00000017463	HNRNPU	99	62.269	Latimeria_chalumnae
ENSCSAG00000009219	HNRNPU	82	63.833	ENSLOCG00000016652	hnrnpua	76	66.199	Lepisosteus_oculatus
ENSCSAG00000009219	HNRNPU	100	96.402	ENSLAFG00000021377	HNRNPU	100	96.402	Loxodonta_africana
ENSCSAG00000009219	HNRNPU	100	98.883	ENSMFAG00000037308	HNRNPU	100	98.883	Macaca_fascicularis
ENSCSAG00000009219	HNRNPU	100	100.000	ENSMMUG00000021098	HNRNPU	100	100.000	Macaca_mulatta
ENSCSAG00000009219	HNRNPU	100	98.883	ENSMNEG00000043645	HNRNPU	100	98.883	Macaca_nemestrina
ENSCSAG00000009219	HNRNPU	75	57.463	ENSMAMG00000007196	hnrnpub	80	58.050	Mastacembelus_armatus
ENSCSAG00000009219	HNRNPU	74	59.425	ENSMZEG00005003185	hnrnpub	80	57.254	Maylandia_zebra
ENSCSAG00000009219	HNRNPU	100	96.030	ENSMAUG00000008842	Hnrnpu	100	96.030	Mesocricetus_auratus
ENSCSAG00000009219	HNRNPU	100	97.767	ENSMICG00000004616	HNRNPU	100	97.767	Microcebus_murinus
ENSCSAG00000009219	HNRNPU	100	95.782	ENSMOCG00000015623	Hnrnpu	100	95.533	Microtus_ochrogaster
ENSCSAG00000009219	HNRNPU	100	89.882	ENSMODG00000006515	HNRNPU	100	90.118	Monodelphis_domestica
ENSCSAG00000009219	HNRNPU	78	70.588	ENSMALG00000018243	hnrnpub	75	61.318	Monopterus_albus
ENSCSAG00000009219	HNRNPU	100	95.911	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	95.911	Mus_caroli
ENSCSAG00000009219	HNRNPU	100	96.035	ENSMUSG00000039630	Hnrnpu	100	96.035	Mus_musculus
ENSCSAG00000009219	HNRNPU	100	94.678	MGP_PahariEiJ_G0028193	Hnrnpu	100	94.802	Mus_pahari
ENSCSAG00000009219	HNRNPU	100	96.035	MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.035	Mus_spretus
ENSCSAG00000009219	HNRNPU	100	89.591	ENSMLUG00000000475	HNRNPU	100	89.122	Myotis_lucifugus
ENSCSAG00000009219	HNRNPU	100	96.402	ENSNGAG00000019075	Hnrnpu	100	96.402	Nannospalax_galili
ENSCSAG00000009219	HNRNPU	75	57.035	ENSNBRG00000017855	hnrnpub	80	56.942	Neolamprologus_brichardi
ENSCSAG00000009219	HNRNPU	99	87.198	ENSMEUG00000000541	HNRNPU	100	87.319	Notamacropus_eugenii
ENSCSAG00000009219	HNRNPU	70	97.087	ENSODEG00000014458	-	100	97.087	Octodon_degus
ENSCSAG00000009219	HNRNPU	80	83.333	ENSONIG00000001260	hnrnpub	88	83.333	Oreochromis_niloticus
ENSCSAG00000009219	HNRNPU	98	95.916	ENSOCUG00000014469	HNRNPU	93	95.916	Oryctolagus_cuniculus
ENSCSAG00000009219	HNRNPU	75	56.587	ENSORLG00000016114	hnrnpub	80	54.805	Oryzias_latipes
ENSCSAG00000009219	HNRNPU	75	56.951	ENSORLG00020005363	hnrnpub	80	54.737	Oryzias_latipes_hni
ENSCSAG00000009219	HNRNPU	75	56.801	ENSORLG00015001190	hnrnpub	80	55.046	Oryzias_latipes_hsok
ENSCSAG00000009219	HNRNPU	75	56.399	ENSOMEG00000014951	hnrnpub	81	54.977	Oryzias_melastigma
ENSCSAG00000009219	HNRNPU	100	98.511	ENSOGAG00000014024	HNRNPU	100	98.511	Otolemur_garnettii
ENSCSAG00000009219	HNRNPU	82	100.000	ENSOARG00000004985	HNRNPU	92	98.826	Ovis_aries
ENSCSAG00000009219	HNRNPU	100	98.511	ENSPPAG00000038652	HNRNPU	100	98.511	Pan_paniscus
ENSCSAG00000009219	HNRNPU	100	96.242	ENSPPRG00000002662	HNRNPU	100	96.242	Panthera_pardus
ENSCSAG00000009219	HNRNPU	100	98.511	ENSPTRG00000002182	HNRNPU	100	98.511	Pan_troglodytes
ENSCSAG00000009219	HNRNPU	100	100.000	ENSPANG00000011643	HNRNPU	100	100.000	Papio_anubis
ENSCSAG00000009219	HNRNPU	99	56.361	ENSPKIG00000022332	hnrnpub	78	64.706	Paramormyrops_kingsleyae
ENSCSAG00000009219	HNRNPU	75	65.087	ENSPKIG00000006885	hnrnpua	78	66.507	Paramormyrops_kingsleyae
ENSCSAG00000009219	HNRNPU	100	91.885	ENSPCIG00000008657	HNRNPU	100	91.527	Phascolarctos_cinereus
ENSCSAG00000009219	HNRNPU	75	53.744	ENSPFOG00000002908	hnrnpub	80	55.488	Poecilia_formosa
ENSCSAG00000009219	HNRNPU	75	54.038	ENSPLAG00000004160	hnrnpub	80	55.657	Poecilia_latipinna
ENSCSAG00000009219	HNRNPU	100	98.144	ENSPCOG00000018655	-	100	98.144	Propithecus_coquereli
ENSCSAG00000009219	HNRNPU	100	94.541	ENSPCOG00000003883	-	100	94.541	Propithecus_coquereli
ENSCSAG00000009219	HNRNPU	100	95.879	ENSPVAG00000002581	HNRNPU	100	95.879	Pteropus_vampyrus
ENSCSAG00000009219	HNRNPU	75	57.640	ENSPNYG00000021642	hnrnpub	80	57.410	Pundamilia_nyererei
ENSCSAG00000009219	HNRNPU	99	55.972	ENSPNAG00000001055	hnrnpub	79	64.399	Pygocentrus_nattereri
ENSCSAG00000009219	HNRNPU	100	95.037	ENSRNOG00000033790	Hnrnpu	100	95.658	Rattus_norvegicus
ENSCSAG00000009219	HNRNPU	100	98.139	ENSRBIG00000031519	HNRNPU	100	98.139	Rhinopithecus_bieti
ENSCSAG00000009219	HNRNPU	100	99.752	ENSRROG00000041642	HNRNPU	100	99.752	Rhinopithecus_roxellana
ENSCSAG00000009219	HNRNPU	75	66.512	ENSSFOG00015001124	hnrnpub	78	65.683	Scleropages_formosus
ENSCSAG00000009219	HNRNPU	94	60.104	ENSSFOG00015019004	hnrnpu	77	67.412	Scleropages_formosus
ENSCSAG00000009219	HNRNPU	69	61.661	ENSSMAG00000003607	hnrnpub	77	57.669	Scophthalmus_maximus
ENSCSAG00000009219	HNRNPU	75	55.117	ENSSDUG00000005912	hnrnpub	79	56.287	Seriola_dumerili
ENSCSAG00000009219	HNRNPU	75	54.971	ENSSLDG00000004899	hnrnpub	79	56.138	Seriola_lalandi_dorsalis
ENSCSAG00000009219	HNRNPU	100	79.187	ENSSPUG00000011393	HNRNPU	100	79.665	Sphenodon_punctatus
ENSCSAG00000009219	HNRNPU	68	60.993	ENSSPAG00000011853	hnrnpub	80	58.423	Stegastes_partitus
ENSCSAG00000009219	HNRNPU	100	98.635	ENSSSCG00000010877	HNRNPU	100	98.635	Sus_scrofa
ENSCSAG00000009219	HNRNPU	75	57.271	ENSTRUG00000007759	hnrnpub	79	57.740	Takifugu_rubripes
ENSCSAG00000009219	HNRNPU	80	68.085	ENSTNIG00000009725	hnrnpub	90	68.085	Tetraodon_nigroviridis
ENSCSAG00000009219	HNRNPU	70	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
ENSCSAG00000009219	HNRNPU	100	96.364	ENSUAMG00000021120	HNRNPU	100	96.364	Ursus_americanus
ENSCSAG00000009219	HNRNPU	89	98.000	ENSUMAG00000012322	HNRNPU	98	95.495	Ursus_maritimus
ENSCSAG00000009219	HNRNPU	80	97.297	ENSVPAG00000010520	HNRNPU	91	97.297	Vicugna_pacos
ENSCSAG00000009219	HNRNPU	100	98.387	ENSVVUG00000026524	HNRNPU	100	98.387	Vulpes_vulpes
ENSCSAG00000009219	HNRNPU	99	67.476	ENSXETG00000011386	hnrnpu	99	68.396	Xenopus_tropicalis
ENSCSAG00000009219	HNRNPU	75	54.038	ENSXMAG00000010356	hnrnpub	80	55.793	Xiphophorus_maculatus