EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000009817 (Gene tree)
Gene ID: 103218863
Gene Symbol: APOBEC1
Alias: APOBEC-1|BEDP|CDAR1|HEPR
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 1
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 4385 bases
Position: chr11:7696259-7700643
Accession: 604
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000006063	APOBEC_N	PF08210.11	6.4e-28	1	1
ENSCSAP00000006063	APOBEC_C	PF05240.14	7.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000007902	APOBEC1-201	1373	-	ENSCSAP00000006063	191 (aa)	-	A0A0D9RBS4

Gene Model

Click here to download ENSCSAG00000009817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000009817's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000009817	APOBEC1	100	93.194	ENSG00000111701	APOBEC1	81	93.194	Homo_sapiens
ENSCSAG00000009817	APOBEC1	99	82.632	ENSAMEG00000007098	APOBEC1	80	82.632	Ailuropoda_melanoleuca
ENSCSAG00000009817	APOBEC1	66	41.270	ENSACAG00000028578	-	69	41.270	Anolis_carolinensis
ENSCSAG00000009817	APOBEC1	98	92.553	ENSANAG00000027743	APOBEC1	76	92.553	Aotus_nancymaae
ENSCSAG00000009817	APOBEC1	99	75.263	ENSBTAG00000014683	APOBEC1	81	75.263	Bos_taurus
ENSCSAG00000009817	APOBEC1	100	90.052	ENSCJAG00000005398	APOBEC1	86	90.052	Callithrix_jacchus
ENSCSAG00000009817	APOBEC1	99	79.474	ENSCAFG00000013901	APOBEC1	81	79.474	Canis_familiaris
ENSCSAG00000009817	APOBEC1	99	80.000	ENSCAFG00020003511	APOBEC1	79	80.000	Canis_lupus_dingo
ENSCSAG00000009817	APOBEC1	99	76.842	ENSCHIG00000011898	APOBEC1	79	76.842	Capra_hircus
ENSCSAG00000009817	APOBEC1	52	82.828	ENSTSYG00000029141	APOBEC1	70	82.828	Carlito_syrichta
ENSCSAG00000009817	APOBEC1	96	71.585	ENSCAPG00000015882	-	85	71.585	Cavia_aperea
ENSCSAG00000009817	APOBEC1	99	68.783	ENSCPOG00000033068	APOBEC1	80	68.783	Cavia_porcellus
ENSCSAG00000009817	APOBEC1	100	92.670	ENSCCAG00000022258	APOBEC1	81	92.670	Cebus_capucinus
ENSCSAG00000009817	APOBEC1	100	97.382	ENSCATG00000021613	APOBEC1	77	97.382	Cercocebus_atys
ENSCSAG00000009817	APOBEC1	96	70.109	ENSCLAG00000014645	APOBEC1	80	70.109	Chinchilla_lanigera
ENSCSAG00000009817	APOBEC1	57	77.778	ENSCHOG00000002355	-	89	77.778	Choloepus_hoffmanni
ENSCSAG00000009817	APOBEC1	87	47.024	ENSCPBG00000014327	-	63	47.024	Chrysemys_picta_bellii
ENSCSAG00000009817	APOBEC1	87	45.238	ENSCPBG00000014328	-	73	45.238	Chrysemys_picta_bellii
ENSCSAG00000009817	APOBEC1	73	47.887	ENSCPBG00000017398	-	63	47.887	Chrysemys_picta_bellii
ENSCSAG00000009817	APOBEC1	73	48.592	ENSCPBG00000014335	-	57	48.592	Chrysemys_picta_bellii
ENSCSAG00000009817	APOBEC1	98	41.053	ENSCPBG00000014331	-	76	41.053	Chrysemys_picta_bellii
ENSCSAG00000009817	APOBEC1	100	97.382	ENSCANG00000038359	APOBEC1	83	97.382	Colobus_angolensis_palliatus
ENSCSAG00000009817	APOBEC1	94	71.111	ENSCGRG00001011130	Apobec1	79	71.111	Cricetulus_griseus_chok1gshd
ENSCSAG00000009817	APOBEC1	94	71.111	ENSCGRG00000008644	Apobec1	79	71.111	Cricetulus_griseus_crigri
ENSCSAG00000009817	APOBEC1	99	80.526	ENSDNOG00000010926	APOBEC1	81	80.526	Dasypus_novemcinctus
ENSCSAG00000009817	APOBEC1	95	65.574	ENSDORG00000023717	Apobec1	86	65.574	Dipodomys_ordii
ENSCSAG00000009817	APOBEC1	98	78.307	ENSETEG00000004867	APOBEC1	80	78.307	Echinops_telfairi
ENSCSAG00000009817	APOBEC1	100	83.246	ENSEASG00005015951	APOBEC1	80	83.246	Equus_asinus_asinus
ENSCSAG00000009817	APOBEC1	100	83.246	ENSECAG00000017163	APOBEC1	100	83.246	Equus_caballus
ENSCSAG00000009817	APOBEC1	91	52.023	ENSEEUG00000007530	-	82	52.023	Erinaceus_europaeus
ENSCSAG00000009817	APOBEC1	98	65.957	ENSEEUG00000009112	-	84	65.957	Erinaceus_europaeus
ENSCSAG00000009817	APOBEC1	99	83.684	ENSFCAG00000009350	APOBEC1	81	83.684	Felis_catus
ENSCSAG00000009817	APOBEC1	57	50.459	ENSFALG00000007257	-	55	50.459	Ficedula_albicollis
ENSCSAG00000009817	APOBEC1	99	60.317	ENSFDAG00000018470	APOBEC1	91	60.317	Fukomys_damarensis
ENSCSAG00000009817	APOBEC1	73	50.000	ENSGAGG00000004947	-	70	50.000	Gopherus_agassizii
ENSCSAG00000009817	APOBEC1	90	46.552	ENSGAGG00000011837	-	84	48.026	Gopherus_agassizii
ENSCSAG00000009817	APOBEC1	79	46.667	ENSGAGG00000021744	-	58	46.667	Gopherus_agassizii
ENSCSAG00000009817	APOBEC1	87	45.882	ENSGAGG00000006624	-	59	45.882	Gopherus_agassizii
ENSCSAG00000009817	APOBEC1	99	66.138	ENSHGLG00000001495	APOBEC1	80	66.138	Heterocephalus_glaber_female
ENSCSAG00000009817	APOBEC1	99	66.138	ENSHGLG00100002187	APOBEC1	80	66.138	Heterocephalus_glaber_male
ENSCSAG00000009817	APOBEC1	96	63.043	ENSSTOG00000021971	APOBEC1	68	82.090	Ictidomys_tridecemlineatus
ENSCSAG00000009817	APOBEC1	95	75.691	ENSJJAG00000022108	Apobec1	79	75.691	Jaculus_jaculus
ENSCSAG00000009817	APOBEC1	99	77.895	ENSLAFG00000030837	APOBEC1	85	77.895	Loxodonta_africana
ENSCSAG00000009817	APOBEC1	100	97.382	ENSMFAG00000000277	APOBEC1	100	97.382	Macaca_fascicularis
ENSCSAG00000009817	APOBEC1	100	96.859	ENSMNEG00000029670	APOBEC1	81	96.859	Macaca_nemestrina
ENSCSAG00000009817	APOBEC1	100	97.382	ENSMLEG00000036301	APOBEC1	81	97.382	Mandrillus_leucophaeus
ENSCSAG00000009817	APOBEC1	95	71.823	ENSMAUG00000022167	Apobec1	82	71.823	Mesocricetus_auratus
ENSCSAG00000009817	APOBEC1	99	82.632	ENSMICG00000043645	APOBEC1	83	82.632	Microcebus_murinus
ENSCSAG00000009817	APOBEC1	99	66.842	ENSMODG00000018004	APOBEC1	81	66.842	Monodelphis_domestica
ENSCSAG00000009817	APOBEC1	94	70.391	ENSMUSG00000040613	Apobec1	78	70.391	Mus_musculus
ENSCSAG00000009817	APOBEC1	95	67.582	MGP_PahariEiJ_G0022580	-	79	67.582	Mus_pahari
ENSCSAG00000009817	APOBEC1	94	70.391	MGP_SPRETEiJ_G0029857	Apobec1	78	70.391	Mus_spretus
ENSCSAG00000009817	APOBEC1	99	77.895	ENSMPUG00000017532	APOBEC1	81	77.895	Mustela_putorius_furo
ENSCSAG00000009817	APOBEC1	95	73.481	ENSNGAG00000022607	Apobec1	79	73.481	Nannospalax_galili
ENSCSAG00000009817	APOBEC1	100	94.241	ENSNLEG00000005342	APOBEC1	81	94.241	Nomascus_leucogenys
ENSCSAG00000009817	APOBEC1	99	64.737	ENSMEUG00000013406	APOBEC1	81	64.737	Notamacropus_eugenii
ENSCSAG00000009817	APOBEC1	74	66.667	ENSOPRG00000009508	-	78	66.667	Ochotona_princeps
ENSCSAG00000009817	APOBEC1	99	75.789	ENSOCUG00000025736	APOBEC1	71	75.789	Oryctolagus_cuniculus
ENSCSAG00000009817	APOBEC1	99	80.000	ENSOGAG00000026415	APOBEC1	81	80.000	Otolemur_garnettii
ENSCSAG00000009817	APOBEC1	99	75.789	ENSOARG00000002072	APOBEC1	79	75.789	Ovis_aries
ENSCSAG00000009817	APOBEC1	100	84.293	ENSPPAG00000027657	APOBEC1	79	84.293	Pan_paniscus
ENSCSAG00000009817	APOBEC1	99	83.158	ENSPPRG00000012182	APOBEC1	81	83.158	Panthera_pardus
ENSCSAG00000009817	APOBEC1	99	83.158	ENSPTIG00000020280	APOBEC1	81	83.158	Panthera_tigris_altaica
ENSCSAG00000009817	APOBEC1	100	93.194	ENSPTRG00000004614	APOBEC1	81	93.194	Pan_troglodytes
ENSCSAG00000009817	APOBEC1	100	97.382	ENSPANG00000021027	APOBEC1	81	97.382	Papio_anubis
ENSCSAG00000009817	APOBEC1	96	44.865	ENSPSIG00000012568	-	77	44.865	Pelodiscus_sinensis
ENSCSAG00000009817	APOBEC1	71	49.541	ENSPSIG00000012791	-	75	49.541	Pelodiscus_sinensis
ENSCSAG00000009817	APOBEC1	94	70.556	ENSPEMG00000023841	Apobec1	79	70.556	Peromyscus_maniculatus_bairdii
ENSCSAG00000009817	APOBEC1	99	67.895	ENSPCIG00000023973	APOBEC1	81	67.895	Phascolarctos_cinereus
ENSCSAG00000009817	APOBEC1	100	93.717	ENSPPYG00000004228	APOBEC1	77	93.717	Pongo_abelii
ENSCSAG00000009817	APOBEC1	74	80.851	ENSPCAG00000008733	APOBEC1	75	80.851	Procavia_capensis
ENSCSAG00000009817	APOBEC1	99	84.211	ENSPCOG00000013957	APOBEC1	84	84.211	Propithecus_coquereli
ENSCSAG00000009817	APOBEC1	99	61.053	ENSPVAG00000010709	APOBEC1	80	61.053	Pteropus_vampyrus
ENSCSAG00000009817	APOBEC1	94	68.156	ENSRNOG00000015411	Apobec1	78	68.156	Rattus_norvegicus
ENSCSAG00000009817	APOBEC1	100	95.288	ENSRBIG00000031161	APOBEC1	81	95.288	Rhinopithecus_bieti
ENSCSAG00000009817	APOBEC1	100	94.764	ENSRROG00000033576	APOBEC1	100	94.764	Rhinopithecus_roxellana
ENSCSAG00000009817	APOBEC1	74	93.662	ENSSBOG00000030587	APOBEC1	80	93.662	Saimiri_boliviensis_boliviensis
ENSCSAG00000009817	APOBEC1	99	69.474	ENSSHAG00000008925	APOBEC1	83	69.474	Sarcophilus_harrisii
ENSCSAG00000009817	APOBEC1	73	67.857	ENSSARG00000000032	-	82	67.857	Sorex_araneus
ENSCSAG00000009817	APOBEC1	50	72.917	ENSSARG00000011972	-	73	72.917	Sorex_araneus
ENSCSAG00000009817	APOBEC1	88	39.766	ENSSPUG00000009044	-	65	39.766	Sphenodon_punctatus
ENSCSAG00000009817	APOBEC1	99	81.579	ENSSSCG00000000668	APOBEC1	81	81.579	Sus_scrofa
ENSCSAG00000009817	APOBEC1	58	54.054	ENSTGUG00000013118	-	76	54.054	Taeniopygia_guttata
ENSCSAG00000009817	APOBEC1	99	77.368	ENSTBEG00000010043	APOBEC1	80	77.368	Tupaia_belangeri
ENSCSAG00000009817	APOBEC1	74	78.014	ENSTTRG00000014015	APOBEC1	75	78.014	Tursiops_truncatus
ENSCSAG00000009817	APOBEC1	99	82.105	ENSUAMG00000011636	APOBEC1	78	82.105	Ursus_americanus
ENSCSAG00000009817	APOBEC1	99	82.105	ENSUMAG00000016552	APOBEC1	78	82.105	Ursus_maritimus
ENSCSAG00000009817	APOBEC1	99	77.368	ENSVPAG00000001343	APOBEC1	81	77.368	Vicugna_pacos
ENSCSAG00000009817	APOBEC1	99	81.053	ENSVVUG00000010522	APOBEC1	81	81.053	Vulpes_vulpes