EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000009821 (Gene tree)
Gene ID: 103221629
Gene Symbol: SNRPC
Alias: U1-C|Yhc1
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 16447 bases
Position: chr17:37332687-37349133
Accession: 103221629
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000006067	zf-U1	PF06220.12	8.5e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000007904	SNRPC-201	1398	-	ENSCSAP00000006067	178 (aa)	XP_007971069	A0A0D9RBS8

Gene Model

Click here to download ENSCSAG00000009821's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000009821's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000009821	SNRPC	100	89.326	ENSG00000124562	SNRPC	100	89.326	Homo_sapiens
ENSCSAG00000009821	SNRPC	100	83.708	ENSAMEG00000000963	SNRPC	87	78.409	Ailuropoda_melanoleuca
ENSCSAG00000009821	SNRPC	100	81.461	ENSACAG00000015721	SNRPC	87	76.136	Anolis_carolinensis
ENSCSAG00000009821	SNRPC	100	73.596	ENSANAG00000019157	-	100	75.281	Aotus_nancymaae
ENSCSAG00000009821	SNRPC	100	89.326	ENSANAG00000019696	-	100	89.326	Aotus_nancymaae
ENSCSAG00000009821	SNRPC	100	84.831	ENSANAG00000007843	-	100	78.652	Aotus_nancymaae
ENSCSAG00000009821	SNRPC	100	75.281	ENSANAG00000019726	-	92	77.528	Aotus_nancymaae
ENSCSAG00000009821	SNRPC	100	67.978	ENSANAG00000021444	-	61	83.333	Aotus_nancymaae
ENSCSAG00000009821	SNRPC	100	75.281	ENSANAG00000021026	-	92	78.090	Aotus_nancymaae
ENSCSAG00000009821	SNRPC	99	81.921	ENSANAG00000020588	-	92	71.429	Aotus_nancymaae
ENSCSAG00000009821	SNRPC	100	56.742	ENSAMXG00000032641	snrpc	87	63.483	Astyanax_mexicanus
ENSCSAG00000009821	SNRPC	100	100.000	ENSBTAG00000024549	SNRPC	100	100.000	Bos_taurus
ENSCSAG00000009821	SNRPC	100	84.270	ENSCJAG00000043055	-	100	78.090	Callithrix_jacchus
ENSCSAG00000009821	SNRPC	100	83.146	ENSCJAG00000041822	-	100	76.966	Callithrix_jacchus
ENSCSAG00000009821	SNRPC	100	89.326	ENSCJAG00000015321	-	100	89.326	Callithrix_jacchus
ENSCSAG00000009821	SNRPC	100	60.674	ENSCAFG00000025525	-	100	59.551	Canis_familiaris
ENSCSAG00000009821	SNRPC	100	88.202	ENSCAFG00000028988	-	100	88.202	Canis_familiaris
ENSCSAG00000009821	SNRPC	66	100.000	ENSCAFG00000001231	-	93	100.000	Canis_familiaris
ENSCSAG00000009821	SNRPC	100	81.461	ENSCAFG00000031775	-	100	75.281	Canis_familiaris
ENSCSAG00000009821	SNRPC	100	89.326	ENSCAFG00020005945	-	100	89.326	Canis_lupus_dingo
ENSCSAG00000009821	SNRPC	100	81.461	ENSCAFG00020017383	-	100	75.281	Canis_lupus_dingo
ENSCSAG00000009821	SNRPC	99	75.568	ENSCAFG00020009944	-	90	76.136	Canis_lupus_dingo
ENSCSAG00000009821	SNRPC	100	99.438	ENSCAFG00020026577	-	100	99.438	Canis_lupus_dingo
ENSCSAG00000009821	SNRPC	100	82.022	ENSCAFG00020005758	-	99	76.136	Canis_lupus_dingo
ENSCSAG00000009821	SNRPC	100	65.169	ENSCHIG00000005039	-	100	56.522	Capra_hircus
ENSCSAG00000009821	SNRPC	100	84.831	ENSCHIG00000012087	-	100	78.652	Capra_hircus
ENSCSAG00000009821	SNRPC	100	89.326	ENSTSYG00000011216	-	100	89.326	Carlito_syrichta
ENSCSAG00000009821	SNRPC	98	76.571	ENSTSYG00000029745	-	50	94.000	Carlito_syrichta
ENSCSAG00000009821	SNRPC	100	62.360	ENSTSYG00000025721	-	100	57.865	Carlito_syrichta
ENSCSAG00000009821	SNRPC	90	83.851	ENSCAPG00000005161	SNRPC	100	83.851	Cavia_aperea
ENSCSAG00000009821	SNRPC	100	89.326	ENSCPOG00000008563	SNRPC	100	89.326	Cavia_porcellus
ENSCSAG00000009821	SNRPC	98	81.714	ENSCCAG00000022751	-	95	76.571	Cebus_capucinus
ENSCSAG00000009821	SNRPC	98	67.429	ENSCCAG00000022209	-	95	61.143	Cebus_capucinus
ENSCSAG00000009821	SNRPC	100	62.360	ENSCCAG00000028293	-	100	60.112	Cebus_capucinus
ENSCSAG00000009821	SNRPC	100	80.899	ENSCCAG00000036059	-	89	80.899	Cebus_capucinus
ENSCSAG00000009821	SNRPC	100	89.326	ENSCATG00000035787	SNRPC	100	89.326	Cercocebus_atys
ENSCSAG00000009821	SNRPC	99	72.727	ENSCLAG00000010242	-	58	84.211	Chinchilla_lanigera
ENSCSAG00000009821	SNRPC	100	89.326	ENSCLAG00000016920	SNRPC	100	89.326	Chinchilla_lanigera
ENSCSAG00000009821	SNRPC	100	68.539	ENSCHOG00000011439	SNRPC	88	63.068	Choloepus_hoffmanni
ENSCSAG00000009821	SNRPC	100	83.146	ENSCPBG00000027142	SNRPC	100	76.966	Chrysemys_picta_bellii
ENSCSAG00000009821	SNRPC	100	89.326	ENSCANG00000028035	SNRPC	100	89.326	Colobus_angolensis_palliatus
ENSCSAG00000009821	SNRPC	100	74.157	ENSCGRG00001021483	-	100	66.292	Cricetulus_griseus_chok1gshd
ENSCSAG00000009821	SNRPC	100	84.831	ENSCGRG00001009011	-	100	78.652	Cricetulus_griseus_chok1gshd
ENSCSAG00000009821	SNRPC	100	83.146	ENSCGRG00000005005	Snrpc	99	77.841	Cricetulus_griseus_crigri
ENSCSAG00000009821	SNRPC	100	84.270	ENSDNOG00000034699	-	99	78.090	Dasypus_novemcinctus
ENSCSAG00000009821	SNRPC	67	99.167	ENSDNOG00000042403	-	95	99.167	Dasypus_novemcinctus
ENSCSAG00000009821	SNRPC	100	98.876	ENSEASG00005021007	SNRPC	100	98.876	Equus_asinus_asinus
ENSCSAG00000009821	SNRPC	100	98.876	ENSECAG00000026848	SNRPC	100	98.876	Equus_caballus
ENSCSAG00000009821	SNRPC	99	67.232	ENSEEUG00000014633	SNRPC	90	61.017	Erinaceus_europaeus
ENSCSAG00000009821	SNRPC	53	87.234	ENSELUG00000000815	SNRPC	50	94.872	Esox_lucius
ENSCSAG00000009821	SNRPC	54	98.958	ENSFCAG00000031775	-	56	98.958	Felis_catus
ENSCSAG00000009821	SNRPC	100	89.326	ENSFCAG00000044077	-	100	89.326	Felis_catus
ENSCSAG00000009821	SNRPC	100	84.270	ENSFALG00000003756	SNRPC	100	78.090	Ficedula_albicollis
ENSCSAG00000009821	SNRPC	100	89.326	ENSFDAG00000018111	SNRPC	100	89.326	Fukomys_damarensis
ENSCSAG00000009821	SNRPC	100	82.682	ENSGALG00000002773	SNRPC	100	76.536	Gallus_gallus
ENSCSAG00000009821	SNRPC	100	83.146	ENSGAGG00000003063	SNRPC	100	76.966	Gopherus_agassizii
ENSCSAG00000009821	SNRPC	100	89.326	ENSGGOG00000012499	SNRPC	100	89.326	Gorilla_gorilla
ENSCSAG00000009821	SNRPC	63	81.250	ENSHGLG00000005871	-	54	88.312	Heterocephalus_glaber_female
ENSCSAG00000009821	SNRPC	100	89.326	ENSHGLG00000013981	SNRPC	100	89.326	Heterocephalus_glaber_female
ENSCSAG00000009821	SNRPC	100	89.326	ENSHGLG00100009478	SNRPC	100	89.326	Heterocephalus_glaber_male
ENSCSAG00000009821	SNRPC	100	74.157	ENSHGLG00100017764	-	100	75.843	Heterocephalus_glaber_male
ENSCSAG00000009821	SNRPC	53	86.170	ENSIPUG00000024851	snrpc	100	63.483	Ictalurus_punctatus
ENSCSAG00000009821	SNRPC	100	89.326	ENSSTOG00000013786	SNRPC	100	89.326	Ictidomys_tridecemlineatus
ENSCSAG00000009821	SNRPC	100	84.831	ENSJJAG00000021741	Snrpc	100	78.652	Jaculus_jaculus
ENSCSAG00000009821	SNRPC	100	89.326	ENSLAFG00000013534	SNRPC	100	89.326	Loxodonta_africana
ENSCSAG00000009821	SNRPC	100	84.831	ENSMFAG00000030525	-	100	78.652	Macaca_fascicularis
ENSCSAG00000009821	SNRPC	100	89.326	ENSMFAG00000031764	-	100	89.326	Macaca_fascicularis
ENSCSAG00000009821	SNRPC	100	84.270	ENSMMUG00000000869	-	100	84.270	Macaca_mulatta
ENSCSAG00000009821	SNRPC	100	76.966	ENSMMUG00000045425	-	100	71.348	Macaca_mulatta
ENSCSAG00000009821	SNRPC	100	84.270	ENSMMUG00000039415	-	100	78.090	Macaca_mulatta
ENSCSAG00000009821	SNRPC	100	89.326	ENSMNEG00000032731	SNRPC	100	89.326	Macaca_nemestrina
ENSCSAG00000009821	SNRPC	100	89.326	ENSMLEG00000033916	-	100	89.326	Mandrillus_leucophaeus
ENSCSAG00000009821	SNRPC	98	81.034	ENSMLEG00000040224	-	89	72.414	Mandrillus_leucophaeus
ENSCSAG00000009821	SNRPC	100	86.517	ENSMGAG00000006054	SNRPC	100	86.517	Meleagris_gallopavo
ENSCSAG00000009821	SNRPC	100	74.157	ENSMICG00000036552	-	87	72.000	Microcebus_murinus
ENSCSAG00000009821	SNRPC	100	88.764	ENSMICG00000007339	-	100	88.764	Microcebus_murinus
ENSCSAG00000009821	SNRPC	100	84.831	ENSMICG00000032183	-	100	78.652	Microcebus_murinus
ENSCSAG00000009821	SNRPC	100	84.831	ENSMOCG00000017609	Snrpc	100	78.652	Microtus_ochrogaster
ENSCSAG00000009821	SNRPC	100	84.270	ENSMODG00000013904	-	100	78.090	Monodelphis_domestica
ENSCSAG00000009821	SNRPC	100	84.831	MGP_CAROLIEiJ_G0021308	Snrpc	100	78.652	Mus_caroli
ENSCSAG00000009821	SNRPC	100	84.831	ENSMUSG00000024217	Snrpc	100	78.652	Mus_musculus
ENSCSAG00000009821	SNRPC	66	99.153	MGP_SPRETEiJ_G0022221	-	98	99.153	Mus_spretus
ENSCSAG00000009821	SNRPC	100	83.708	ENSMPUG00000003210	SNRPC	99	78.409	Mustela_putorius_furo
ENSCSAG00000009821	SNRPC	100	83.708	ENSMLUG00000002488	SNRPC	99	78.409	Myotis_lucifugus
ENSCSAG00000009821	SNRPC	100	84.831	ENSNGAG00000019686	Snrpc	100	78.652	Nannospalax_galili
ENSCSAG00000009821	SNRPC	100	89.326	ENSNLEG00000034810	SNRPC	100	89.326	Nomascus_leucogenys
ENSCSAG00000009821	SNRPC	90	83.230	ENSMEUG00000009300	SNRPC	100	83.230	Notamacropus_eugenii
ENSCSAG00000009821	SNRPC	100	89.326	ENSODEG00000017080	-	100	89.326	Octodon_degus
ENSCSAG00000009821	SNRPC	100	89.326	ENSODEG00000020370	-	100	89.326	Octodon_degus
ENSCSAG00000009821	SNRPC	100	84.831	ENSODEG00000020201	-	100	78.652	Octodon_degus
ENSCSAG00000009821	SNRPC	54	93.814	ENSODEG00000006008	-	69	94.792	Octodon_degus
ENSCSAG00000009821	SNRPC	100	89.326	ENSODEG00000018985	-	100	89.326	Octodon_degus
ENSCSAG00000009821	SNRPC	100	84.270	ENSODEG00000019633	-	100	78.090	Octodon_degus
ENSCSAG00000009821	SNRPC	90	81.212	ENSOANG00000003405	SNRPC	99	81.212	Ornithorhynchus_anatinus
ENSCSAG00000009821	SNRPC	100	84.270	ENSOCUG00000026430	-	99	78.090	Oryctolagus_cuniculus
ENSCSAG00000009821	SNRPC	54	97.917	ENSOCUG00000023292	-	100	76.966	Oryctolagus_cuniculus
ENSCSAG00000009821	SNRPC	100	89.326	ENSOCUG00000026668	-	100	89.326	Oryctolagus_cuniculus
ENSCSAG00000009821	SNRPC	97	75.145	ENSOGAG00000028405	-	99	72.832	Otolemur_garnettii
ENSCSAG00000009821	SNRPC	100	87.640	ENSOGAG00000026269	-	100	78.090	Otolemur_garnettii
ENSCSAG00000009821	SNRPC	98	85.057	ENSOGAG00000008755	-	88	78.409	Otolemur_garnettii
ENSCSAG00000009821	SNRPC	100	89.326	ENSOARG00000010823	SNRPC	100	89.326	Ovis_aries
ENSCSAG00000009821	SNRPC	100	89.326	ENSPPAG00000043871	SNRPC	100	89.326	Pan_paniscus
ENSCSAG00000009821	SNRPC	100	89.326	ENSPPRG00000008647	-	100	89.326	Panthera_pardus
ENSCSAG00000009821	SNRPC	90	68.293	ENSPTIG00000011880	-	81	49.091	Panthera_tigris_altaica
ENSCSAG00000009821	SNRPC	100	89.326	ENSPTIG00000021867	-	100	89.326	Panthera_tigris_altaica
ENSCSAG00000009821	SNRPC	100	89.326	ENSPTRG00000018070	SNRPC	100	89.326	Pan_troglodytes
ENSCSAG00000009821	SNRPC	100	67.416	ENSPANG00000018228	-	94	70.225	Papio_anubis
ENSCSAG00000009821	SNRPC	100	89.326	ENSPANG00000022802	-	100	89.326	Papio_anubis
ENSCSAG00000009821	SNRPC	99	81.818	ENSPSIG00000004876	SNRPC	77	81.818	Pelodiscus_sinensis
ENSCSAG00000009821	SNRPC	100	84.831	ENSPEMG00000010773	Snrpc	100	78.652	Peromyscus_maniculatus_bairdii
ENSCSAG00000009821	SNRPC	100	78.090	ENSPEMG00000002763	-	100	71.910	Peromyscus_maniculatus_bairdii
ENSCSAG00000009821	SNRPC	100	83.708	ENSPCAG00000016885	SNRPC	90	78.409	Procavia_capensis
ENSCSAG00000009821	SNRPC	100	89.326	ENSPCOG00000004904	SNRPC	100	89.326	Propithecus_coquereli
ENSCSAG00000009821	SNRPC	100	83.146	ENSPVAG00000015597	SNRPC	87	77.841	Pteropus_vampyrus
ENSCSAG00000009821	SNRPC	100	84.831	ENSRNOG00000000493	Snrpc	100	78.652	Rattus_norvegicus
ENSCSAG00000009821	SNRPC	100	84.831	ENSRBIG00000014819	-	100	78.652	Rhinopithecus_bieti
ENSCSAG00000009821	SNRPC	100	84.831	ENSRBIG00000022998	-	100	84.831	Rhinopithecus_bieti
ENSCSAG00000009821	SNRPC	100	89.326	ENSRBIG00000037567	-	100	89.326	Rhinopithecus_bieti
ENSCSAG00000009821	SNRPC	100	89.326	ENSRROG00000041300	SNRPC	100	89.326	Rhinopithecus_roxellana
ENSCSAG00000009821	SNRPC	100	89.326	ENSSBOG00000031528	-	100	89.326	Saimiri_boliviensis_boliviensis
ENSCSAG00000009821	SNRPC	98	73.714	ENSSBOG00000023189	-	58	86.458	Saimiri_boliviensis_boliviensis
ENSCSAG00000009821	SNRPC	96	73.529	ENSSBOG00000032361	-	66	81.250	Saimiri_boliviensis_boliviensis
ENSCSAG00000009821	SNRPC	99	84.091	ENSSHAG00000000945	-	87	77.841	Sarcophilus_harrisii
ENSCSAG00000009821	SNRPC	100	83.708	ENSSPUG00000002502	SNRPC	100	77.528	Sphenodon_punctatus
ENSCSAG00000009821	SNRPC	100	100.000	ENSSSCG00000001531	SNRPC	100	100.000	Sus_scrofa
ENSCSAG00000009821	SNRPC	100	83.146	ENSTGUG00000001773	SNRPC	99	77.401	Taeniopygia_guttata
ENSCSAG00000009821	SNRPC	98	78.286	ENSTBEG00000013022	-	62	92.708	Tupaia_belangeri
ENSCSAG00000009821	SNRPC	54	91.667	ENSTBEG00000015356	-	68	91.667	Tupaia_belangeri
ENSCSAG00000009821	SNRPC	100	83.708	ENSTTRG00000007827	SNRPC	86	78.409	Tursiops_truncatus
ENSCSAG00000009821	SNRPC	78	97.826	ENSUAMG00000014125	SNRPC	93	97.826	Ursus_americanus
ENSCSAG00000009821	SNRPC	100	98.876	ENSUMAG00000010869	SNRPC	100	98.876	Ursus_maritimus
ENSCSAG00000009821	SNRPC	97	84.393	ENSVVUG00000010467	-	87	80.000	Vulpes_vulpes
ENSCSAG00000009821	SNRPC	100	84.270	ENSVVUG00000021947	-	100	78.090	Vulpes_vulpes