EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000010100 (Gene tree)
Gene ID: -
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 79904 bases
Position: chr25:71568441-71648344
Accession: 103230781
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000006333	SpoU_methylase	PF00588.19	1.9e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000008181	TARBP1-201	4531	XM_007989828	ENSCSAP00000006333	1286 (aa)	XP_007988019	A0A0D9RCJ4

Gene Model

Click here to download ENSCSAG00000010100's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000010100's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000010100	TARBP1	100	97.201	ENSG00000059588	TARBP1	79	97.201	Homo_sapiens
ENSCSAG00000010100	TARBP1	99	46.032	ENSAPOG00000016419	si:dkey-85a20.4	79	46.032	Acanthochromis_polyacanthus
ENSCSAG00000010100	TARBP1	99	85.047	ENSAMEG00000003359	TARBP1	94	85.047	Ailuropoda_melanoleuca
ENSCSAG00000010100	TARBP1	99	46.084	ENSATEG00000020266	si:dkey-85a20.4	79	46.195	Anabas_testudineus
ENSCSAG00000010100	TARBP1	100	68.600	ENSAPLG00000007666	TARBP1	98	68.556	Anas_platyrhynchos
ENSCSAG00000010100	TARBP1	99	63.219	ENSACAG00000001142	TARBP1	80	63.219	Anolis_carolinensis
ENSCSAG00000010100	TARBP1	99	95.028	ENSANAG00000022031	TARBP1	81	95.028	Aotus_nancymaae
ENSCSAG00000010100	TARBP1	99	85.547	ENSBTAG00000004517	TARBP1	79	85.547	Bos_taurus
ENSCSAG00000010100	TARBP1	100	94.557	ENSCJAG00000018155	TARBP1	79	94.557	Callithrix_jacchus
ENSCSAG00000010100	TARBP1	99	86.059	ENSCAFG00000011533	TARBP1	91	86.059	Canis_familiaris
ENSCSAG00000010100	TARBP1	99	86.003	ENSCAFG00020027141	TARBP1	79	86.003	Canis_lupus_dingo
ENSCSAG00000010100	TARBP1	99	84.399	ENSCHIG00000011437	TARBP1	79	84.399	Capra_hircus
ENSCSAG00000010100	TARBP1	99	87.860	ENSTSYG00000010382	TARBP1	95	87.860	Carlito_syrichta
ENSCSAG00000010100	TARBP1	99	69.219	ENSCAPG00000010831	TARBP1	99	69.219	Cavia_aperea
ENSCSAG00000010100	TARBP1	99	78.176	ENSCPOG00000013995	TARBP1	80	78.254	Cavia_porcellus
ENSCSAG00000010100	TARBP1	100	95.101	ENSCCAG00000037278	TARBP1	79	95.101	Cebus_capucinus
ENSCSAG00000010100	TARBP1	100	98.834	ENSCATG00000011754	TARBP1	79	98.834	Cercocebus_atys
ENSCSAG00000010100	TARBP1	99	78.566	ENSCLAG00000003655	TARBP1	95	78.644	Chinchilla_lanigera
ENSCSAG00000010100	TARBP1	89	80.000	ENSCPBG00000005587	TARBP1	76	79.167	Chrysemys_picta_bellii
ENSCSAG00000010100	TARBP1	100	98.523	ENSCANG00000034343	TARBP1	95	98.523	Colobus_angolensis_palliatus
ENSCSAG00000010100	TARBP1	99	78.142	ENSCGRG00001016690	Tarbp1	81	78.142	Cricetulus_griseus_chok1gshd
ENSCSAG00000010100	TARBP1	99	78.142	ENSCGRG00000016893	Tarbp1	87	78.142	Cricetulus_griseus_crigri
ENSCSAG00000010100	TARBP1	99	43.111	ENSCSEG00000005255	si:dkey-85a20.4	78	45.411	Cynoglossus_semilaevis
ENSCSAG00000010100	TARBP1	99	47.104	ENSDARG00000079055	si:dkey-85a20.4	99	54.766	Danio_rerio
ENSCSAG00000010100	TARBP1	99	86.610	ENSDNOG00000008637	TARBP1	78	86.610	Dasypus_novemcinctus
ENSCSAG00000010100	TARBP1	99	74.315	ENSDORG00000007984	Tarbp1	99	74.315	Dipodomys_ordii
ENSCSAG00000010100	TARBP1	99	88.240	ENSEASG00005000252	TARBP1	80	87.928	Equus_asinus_asinus
ENSCSAG00000010100	TARBP1	99	88.006	ENSECAG00000023673	TARBP1	79	88.084	Equus_caballus
ENSCSAG00000010100	TARBP1	99	45.719	ENSELUG00000012193	si:dkey-85a20.4	80	45.719	Esox_lucius
ENSCSAG00000010100	TARBP1	99	82.399	ENSFCAG00000014183	TARBP1	79	82.399	Felis_catus
ENSCSAG00000010100	TARBP1	99	68.281	ENSFALG00000013565	TARBP1	98	68.224	Ficedula_albicollis
ENSCSAG00000010100	TARBP1	99	76.089	ENSFDAG00000001308	TARBP1	99	76.165	Fukomys_damarensis
ENSCSAG00000010100	TARBP1	91	53.803	ENSFHEG00000007565	si:dkey-85a20.4	75	53.803	Fundulus_heteroclitus
ENSCSAG00000010100	TARBP1	100	43.052	ENSGMOG00000004549	si:dkey-85a20.4	93	43.128	Gadus_morhua
ENSCSAG00000010100	TARBP1	99	64.009	ENSGALG00000011000	TARBP1	80	64.009	Gallus_gallus
ENSCSAG00000010100	TARBP1	99	45.420	ENSGAFG00000007387	si:dkey-85a20.4	79	45.343	Gambusia_affinis
ENSCSAG00000010100	TARBP1	100	45.967	ENSGACG00000005865	si:dkey-85a20.4	92	45.967	Gasterosteus_aculeatus
ENSCSAG00000010100	TARBP1	99	73.230	ENSGAGG00000012102	TARBP1	82	73.116	Gopherus_agassizii
ENSCSAG00000010100	TARBP1	100	93.406	ENSGGOG00000022879	TARBP1	94	93.406	Gorilla_gorilla
ENSCSAG00000010100	TARBP1	99	47.131	ENSHBUG00000008877	si:dkey-85a20.4	79	47.131	Haplochromis_burtoni
ENSCSAG00000010100	TARBP1	99	79.345	ENSHGLG00000011592	TARBP1	80	79.423	Heterocephalus_glaber_female
ENSCSAG00000010100	TARBP1	99	78.833	ENSHGLG00100015169	TARBP1	88	78.833	Heterocephalus_glaber_male
ENSCSAG00000010100	TARBP1	98	44.841	ENSIPUG00000005249	si:dkey-85a20.4	77	44.841	Ictalurus_punctatus
ENSCSAG00000010100	TARBP1	99	75.919	ENSSTOG00000032291	TARBP1	91	75.919	Ictidomys_tridecemlineatus
ENSCSAG00000010100	TARBP1	99	73.266	ENSJJAG00000017840	Tarbp1	88	73.266	Jaculus_jaculus
ENSCSAG00000010100	TARBP1	74	47.995	ENSKMAG00000017546	si:dkey-85a20.4	63	48.396	Kryptolebias_marmoratus
ENSCSAG00000010100	TARBP1	76	50.466	ENSLBEG00000012132	si:dkey-85a20.4	68	50.599	Labrus_bergylta
ENSCSAG00000010100	TARBP1	99	56.371	ENSLACG00000004337	TARBP1	79	56.502	Latimeria_chalumnae
ENSCSAG00000010100	TARBP1	99	51.276	ENSLOCG00000016214	si:dkey-85a20.4	79	51.276	Lepisosteus_oculatus
ENSCSAG00000010100	TARBP1	99	86.126	ENSLAFG00000011394	TARBP1	81	86.126	Loxodonta_africana
ENSCSAG00000010100	TARBP1	100	95.575	ENSMFAG00000041068	TARBP1	80	95.575	Macaca_fascicularis
ENSCSAG00000010100	TARBP1	100	95.497	ENSMMUG00000021703	TARBP1	79	95.497	Macaca_mulatta
ENSCSAG00000010100	TARBP1	100	98.989	ENSMNEG00000045002	TARBP1	79	98.989	Macaca_nemestrina
ENSCSAG00000010100	TARBP1	100	98.911	ENSMLEG00000044182	TARBP1	95	98.911	Mandrillus_leucophaeus
ENSCSAG00000010100	TARBP1	99	46.882	ENSMAMG00000021760	si:dkey-85a20.4	80	46.882	Mastacembelus_armatus
ENSCSAG00000010100	TARBP1	99	47.054	ENSMZEG00005005751	si:dkey-85a20.4	79	47.054	Maylandia_zebra
ENSCSAG00000010100	TARBP1	99	77.361	ENSMAUG00000020968	Tarbp1	81	77.361	Mesocricetus_auratus
ENSCSAG00000010100	TARBP1	99	79.050	ENSMICG00000015280	TARBP1	78	79.050	Microcebus_murinus
ENSCSAG00000010100	TARBP1	99	76.484	ENSMOCG00000004128	Tarbp1	81	76.484	Microtus_ochrogaster
ENSCSAG00000010100	TARBP1	99	44.727	ENSMMOG00000007795	si:dkey-85a20.4	79	44.881	Mola_mola
ENSCSAG00000010100	TARBP1	99	76.475	ENSMODG00000008504	TARBP1	78	76.475	Monodelphis_domestica
ENSCSAG00000010100	TARBP1	99	45.581	ENSMALG00000002916	si:dkey-85a20.4	79	45.750	Monopterus_albus
ENSCSAG00000010100	TARBP1	99	76.250	MGP_CAROLIEiJ_G0031729	Tarbp1	79	80.077	Mus_caroli
ENSCSAG00000010100	TARBP1	99	76.016	ENSMUSG00000090290	Tarbp1	81	76.016	Mus_musculus
ENSCSAG00000010100	TARBP1	99	76.503	MGP_PahariEiJ_G0023326	Tarbp1	81	76.503	Mus_pahari
ENSCSAG00000010100	TARBP1	99	76.484	MGP_SPRETEiJ_G0032846	Tarbp1	81	76.484	Mus_spretus
ENSCSAG00000010100	TARBP1	97	83.614	ENSMPUG00000002802	TARBP1	99	83.614	Mustela_putorius_furo
ENSCSAG00000010100	TARBP1	99	75.019	ENSMLUG00000002414	TARBP1	94	75.019	Myotis_lucifugus
ENSCSAG00000010100	TARBP1	100	97.512	ENSNLEG00000002518	TARBP1	79	97.512	Nomascus_leucogenys
ENSCSAG00000010100	TARBP1	79	86.401	ENSOPRG00000013822	TARBP1	63	86.401	Ochotona_princeps
ENSCSAG00000010100	TARBP1	99	78.254	ENSODEG00000005238	TARBP1	83	78.332	Octodon_degus
ENSCSAG00000010100	TARBP1	99	47.216	ENSONIG00000009789	si:dkey-85a20.4	92	47.216	Oreochromis_niloticus
ENSCSAG00000010100	TARBP1	100	85.070	ENSOCUG00000017418	TARBP1	79	85.070	Oryctolagus_cuniculus
ENSCSAG00000010100	TARBP1	99	43.927	ENSORLG00000010529	si:dkey-85a20.4	79	43.869	Oryzias_latipes
ENSCSAG00000010100	TARBP1	99	43.621	ENSORLG00020019264	si:dkey-85a20.4	79	43.564	Oryzias_latipes_hni
ENSCSAG00000010100	TARBP1	99	43.697	ENSORLG00015003276	si:dkey-85a20.4	79	43.641	Oryzias_latipes_hsok
ENSCSAG00000010100	TARBP1	99	84.358	ENSOGAG00000002379	TARBP1	79	84.358	Otolemur_garnettii
ENSCSAG00000010100	TARBP1	99	84.034	ENSOARG00000003434	TARBP1	85	84.034	Ovis_aries
ENSCSAG00000010100	TARBP1	100	97.278	ENSPPAG00000028097	TARBP1	94	97.278	Pan_paniscus
ENSCSAG00000010100	TARBP1	99	81.444	ENSPPRG00000013561	TARBP1	83	81.289	Panthera_pardus
ENSCSAG00000010100	TARBP1	99	85.125	ENSPTIG00000009281	TARBP1	95	85.125	Panthera_tigris_altaica
ENSCSAG00000010100	TARBP1	100	97.123	ENSPTRG00000002124	TARBP1	79	97.123	Pan_troglodytes
ENSCSAG00000010100	TARBP1	100	99.067	ENSPANG00000021933	TARBP1	79	99.067	Papio_anubis
ENSCSAG00000010100	TARBP1	100	47.504	ENSPKIG00000016716	si:dkey-85a20.4	79	47.504	Paramormyrops_kingsleyae
ENSCSAG00000010100	TARBP1	99	70.620	ENSPSIG00000010699	TARBP1	100	70.620	Pelodiscus_sinensis
ENSCSAG00000010100	TARBP1	99	77.873	ENSPEMG00000006888	Tarbp1	85	77.873	Peromyscus_maniculatus_bairdii
ENSCSAG00000010100	TARBP1	90	83.981	ENSPCIG00000029710	TARBP1	76	83.981	Phascolarctos_cinereus
ENSCSAG00000010100	TARBP1	99	45.315	ENSPFOG00000013020	si:dkey-85a20.4	92	45.315	Poecilia_formosa
ENSCSAG00000010100	TARBP1	99	45.573	ENSPLAG00000006044	si:dkey-85a20.4	79	45.496	Poecilia_latipinna
ENSCSAG00000010100	TARBP1	99	45.699	ENSPMEG00000017857	si:dkey-85a20.4	79	45.622	Poecilia_mexicana
ENSCSAG00000010100	TARBP1	99	45.767	ENSPREG00000022753	si:dkey-85a20.4	79	45.503	Poecilia_reticulata
ENSCSAG00000010100	TARBP1	89	97.746	ENSPPYG00000000102	TARBP1	77	97.746	Pongo_abelii
ENSCSAG00000010100	TARBP1	81	94.000	ENSPCAG00000004808	TARBP1	65	94.000	Procavia_capensis
ENSCSAG00000010100	TARBP1	99	86.371	ENSPCOG00000005666	TARBP1	79	86.449	Propithecus_coquereli
ENSCSAG00000010100	TARBP1	99	67.907	ENSPVAG00000014798	TARBP1	80	67.907	Pteropus_vampyrus
ENSCSAG00000010100	TARBP1	99	45.888	ENSPNYG00000019135	si:dkey-85a20.4	78	45.888	Pundamilia_nyererei
ENSCSAG00000010100	TARBP1	99	71.094	ENSRNOG00000053574	Tarbp1	81	71.094	Rattus_norvegicus
ENSCSAG00000010100	TARBP1	100	91.142	ENSRBIG00000043362	TARBP1	87	91.142	Rhinopithecus_bieti
ENSCSAG00000010100	TARBP1	100	98.289	ENSRROG00000029527	TARBP1	83	98.289	Rhinopithecus_roxellana
ENSCSAG00000010100	TARBP1	100	95.179	ENSSBOG00000034503	TARBP1	92	95.179	Saimiri_boliviensis_boliviensis
ENSCSAG00000010100	TARBP1	99	75.619	ENSSHAG00000000013	TARBP1	95	75.619	Sarcophilus_harrisii
ENSCSAG00000010100	TARBP1	99	47.027	ENSSFOG00015002660	si:dkey-85a20.4	95	47.027	Scleropages_formosus
ENSCSAG00000010100	TARBP1	99	46.702	ENSSMAG00000007081	si:dkey-85a20.4	78	46.778	Scophthalmus_maximus
ENSCSAG00000010100	TARBP1	99	44.907	ENSSDUG00000023566	si:dkey-85a20.4	79	45.027	Seriola_dumerili
ENSCSAG00000010100	TARBP1	99	47.117	ENSSLDG00000020200	si:dkey-85a20.4	79	47.193	Seriola_lalandi_dorsalis
ENSCSAG00000010100	TARBP1	94	85.681	ENSSARG00000012207	TARBP1	75	85.681	Sorex_araneus
ENSCSAG00000010100	TARBP1	99	69.057	ENSSPUG00000015364	TARBP1	79	69.057	Sphenodon_punctatus
ENSCSAG00000010100	TARBP1	99	46.535	ENSSPAG00000007213	si:dkey-85a20.4	79	46.535	Stegastes_partitus
ENSCSAG00000010100	TARBP1	94	95.960	ENSSSCG00000010160	TARBP1	78	95.960	Sus_scrofa
ENSCSAG00000010100	TARBP1	99	68.016	ENSTGUG00000010214	TARBP1	98	68.016	Taeniopygia_guttata
ENSCSAG00000010100	TARBP1	99	45.587	ENSTNIG00000016586	si:dkey-85a20.4	94	45.664	Tetraodon_nigroviridis
ENSCSAG00000010100	TARBP1	94	82.187	ENSTTRG00000008707	TARBP1	78	82.187	Tursiops_truncatus
ENSCSAG00000010100	TARBP1	99	84.735	ENSUMAG00000006730	TARBP1	96	84.735	Ursus_maritimus
ENSCSAG00000010100	TARBP1	85	92.784	ENSVPAG00000007665	TARBP1	75	92.784	Vicugna_pacos
ENSCSAG00000010100	TARBP1	99	85.981	ENSVVUG00000007460	TARBP1	91	85.826	Vulpes_vulpes
ENSCSAG00000010100	TARBP1	99	57.110	ENSXETG00000016224	tarbp1	94	57.110	Xenopus_tropicalis
ENSCSAG00000010100	TARBP1	90	48.704	ENSXCOG00000011779	si:dkey-85a20.4	86	48.704	Xiphophorus_couchianus
ENSCSAG00000010100	TARBP1	81	43.401	ENSXMAG00000009600	si:dkey-85a20.4	100	43.309	Xiphophorus_maculatus