EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000010161 (Gene tree)
Gene ID: 103226856
Gene Symbol: RBM28
Alias: FLJ10377
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 31455 bases
Position: chr21:97112215-97143669
Accession: 103226856
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000006401	RRM_1	PF00076.22	5.2e-57	1	3
ENSCSAP00000006401	RRM_1	PF00076.22	5.2e-57	2	3
ENSCSAP00000006401	RRM_1	PF00076.22	5.2e-57	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000008250	RBM28-201	2335	-	ENSCSAP00000006401	758 (aa)	XP_007981016	A0A0D9RCR2

Gene Model

Click here to download ENSCSAG00000010161's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000010161's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000010161	RBM28	100	96.316	ENSG00000106344	RBM28	100	100.000	Homo_sapiens
ENSCSAG00000010161	RBM28	57	55.079	ENSAPOG00000015512	rbm28	100	51.344	Acanthochromis_polyacanthus
ENSCSAG00000010161	RBM28	99	88.235	ENSAMEG00000004776	RBM28	92	94.624	Ailuropoda_melanoleuca
ENSCSAG00000010161	RBM28	55	55.476	ENSACIG00000023153	rbm28	100	51.566	Amphilophus_citrinellus
ENSCSAG00000010161	RBM28	57	54.751	ENSAOCG00000000462	rbm28	100	51.066	Amphiprion_ocellaris
ENSCSAG00000010161	RBM28	57	54.525	ENSAPEG00000012996	rbm28	100	50.943	Amphiprion_percula
ENSCSAG00000010161	RBM28	58	50.947	ENSATEG00000001672	rbm28	66	50.098	Anabas_testudineus
ENSCSAG00000010161	RBM28	100	93.140	ENSANAG00000033922	RBM28	100	92.480	Aotus_nancymaae
ENSCSAG00000010161	RBM28	60	52.542	ENSACLG00000025024	rbm28	65	52.906	Astatotilapia_calliptera
ENSCSAG00000010161	RBM28	58	58.072	ENSAMXG00000000763	rbm28	99	59.910	Astyanax_mexicanus
ENSCSAG00000010161	RBM28	100	83.663	ENSBTAG00000017001	RBM28	100	100.000	Bos_taurus
ENSCSAG00000010161	RBM28	100	90.802	ENSCJAG00000017731	RBM28	100	91.853	Callithrix_jacchus
ENSCSAG00000010161	RBM28	100	85.112	ENSCAFG00000001667	RBM28	100	85.112	Canis_familiaris
ENSCSAG00000010161	RBM28	100	85.112	ENSCAFG00020021648	RBM28	100	85.112	Canis_lupus_dingo
ENSCSAG00000010161	RBM28	100	83.136	ENSCHIG00000014146	RBM28	100	83.794	Capra_hircus
ENSCSAG00000010161	RBM28	100	85.209	ENSTSYG00000002892	RBM28	100	95.000	Carlito_syrichta
ENSCSAG00000010161	RBM28	84	61.635	ENSCAPG00000013218	RBM28	100	61.478	Cavia_aperea
ENSCSAG00000010161	RBM28	100	83.004	ENSCPOG00000006253	RBM28	100	83.663	Cavia_porcellus
ENSCSAG00000010161	RBM28	100	93.140	ENSCCAG00000035105	RBM28	100	93.140	Cebus_capucinus
ENSCSAG00000010161	RBM28	100	98.029	ENSCATG00000040497	RBM28	100	98.110	Cercocebus_atys
ENSCSAG00000010161	RBM28	100	79.578	ENSCLAG00000003707	RBM28	100	80.501	Chinchilla_lanigera
ENSCSAG00000010161	RBM28	56	87.097	ENSCHOG00000001994	-	63	87.097	Choloepus_hoffmanni
ENSCSAG00000010161	RBM28	51	61.276	ENSCPBG00000018088	RBM28	87	59.529	Chrysemys_picta_bellii
ENSCSAG00000010161	RBM28	91	98.773	ENSCANG00000038397	RBM28	100	100.000	Colobus_angolensis_palliatus
ENSCSAG00000010161	RBM28	65	82.294	ENSCGRG00001021278	Rbm28	100	79.156	Cricetulus_griseus_chok1gshd
ENSCSAG00000010161	RBM28	100	80.603	ENSCGRG00000005098	Rbm28	100	80.472	Cricetulus_griseus_crigri
ENSCSAG00000010161	RBM28	100	48.912	ENSCSEG00000004212	rbm28	100	49.616	Cynoglossus_semilaevis
ENSCSAG00000010161	RBM28	58	55.111	ENSCVAG00000010493	rbm28	99	48.120	Cyprinodon_variegatus
ENSCSAG00000010161	RBM28	100	56.512	ENSDARG00000025332	rbm28	99	47.186	Danio_rerio
ENSCSAG00000010161	RBM28	100	85.112	ENSDNOG00000001124	RBM28	100	85.112	Dasypus_novemcinctus
ENSCSAG00000010161	RBM28	65	81.855	ENSDORG00000004184	Rbm28	97	81.855	Dipodomys_ordii
ENSCSAG00000010161	RBM28	100	71.335	ENSETEG00000007130	RBM28	99	71.728	Echinops_telfairi
ENSCSAG00000010161	RBM28	82	47.644	ENSEBUG00000004419	rbm28	65	42.387	Eptatretus_burgeri
ENSCSAG00000010161	RBM28	100	84.355	ENSEASG00005008528	RBM28	100	84.876	Equus_asinus_asinus
ENSCSAG00000010161	RBM28	100	83.854	ENSECAG00000007745	RBM28	100	84.245	Equus_caballus
ENSCSAG00000010161	RBM28	100	75.853	ENSEEUG00000002389	RBM28	100	75.853	Erinaceus_europaeus
ENSCSAG00000010161	RBM28	100	53.216	ENSELUG00000020602	rbm28	99	51.955	Esox_lucius
ENSCSAG00000010161	RBM28	100	83.926	ENSFCAG00000000946	RBM28	100	100.000	Felis_catus
ENSCSAG00000010161	RBM28	100	84.717	ENSFDAG00000010169	RBM28	100	85.375	Fukomys_damarensis
ENSCSAG00000010161	RBM28	57	52.968	ENSGMOG00000007091	rbm28	67	50.731	Gadus_morhua
ENSCSAG00000010161	RBM28	58	55.481	ENSGAFG00000004802	rbm28	97	54.324	Gambusia_affinis
ENSCSAG00000010161	RBM28	57	56.092	ENSGACG00000012612	rbm28	82	52.104	Gasterosteus_aculeatus
ENSCSAG00000010161	RBM28	71	79.121	ENSGAGG00000008873	RBM28	85	79.121	Gopherus_agassizii
ENSCSAG00000010161	RBM28	95	94.583	ENSGGOG00000004644	RBM28	97	95.139	Gorilla_gorilla
ENSCSAG00000010161	RBM28	51	56.041	ENSHBUG00000009611	rbm28	94	51.359	Haplochromis_burtoni
ENSCSAG00000010161	RBM28	100	84.980	ENSHGLG00000005409	RBM28	100	84.848	Heterocephalus_glaber_female
ENSCSAG00000010161	RBM28	100	84.980	ENSHGLG00100016458	RBM28	100	84.058	Heterocephalus_glaber_male
ENSCSAG00000010161	RBM28	100	84.334	ENSSTOG00000002169	RBM28	100	84.856	Ictidomys_tridecemlineatus
ENSCSAG00000010161	RBM28	100	75.196	ENSJJAG00000022400	Rbm28	100	75.197	Jaculus_jaculus
ENSCSAG00000010161	RBM28	58	55.056	ENSKMAG00000013348	rbm28	64	52.772	Kryptolebias_marmoratus
ENSCSAG00000010161	RBM28	57	57.079	ENSLBEG00000012998	rbm28	100	49.810	Labrus_bergylta
ENSCSAG00000010161	RBM28	74	55.652	ENSLACG00000010485	-	100	56.042	Latimeria_chalumnae
ENSCSAG00000010161	RBM28	90	60.825	ENSLOCG00000015541	rbm28	80	60.825	Lepisosteus_oculatus
ENSCSAG00000010161	RBM28	100	82.872	ENSLAFG00000010717	RBM28	100	82.872	Loxodonta_africana
ENSCSAG00000010161	RBM28	100	98.292	ENSMFAG00000031036	RBM28	100	98.292	Macaca_fascicularis
ENSCSAG00000010161	RBM28	100	98.163	ENSMMUG00000007250	RBM28	100	98.163	Macaca_mulatta
ENSCSAG00000010161	RBM28	100	97.389	ENSMNEG00000036970	RBM28	100	97.500	Macaca_nemestrina
ENSCSAG00000010161	RBM28	84	98.507	ENSMLEG00000037717	RBM28	100	98.507	Mandrillus_leucophaeus
ENSCSAG00000010161	RBM28	100	50.440	ENSMAMG00000008525	rbm28	100	50.510	Mastacembelus_armatus
ENSCSAG00000010161	RBM28	60	52.542	ENSMZEG00005019625	rbm28	70	52.906	Maylandia_zebra
ENSCSAG00000010161	RBM28	100	77.506	ENSMAUG00000002263	Rbm28	99	77.864	Mesocricetus_auratus
ENSCSAG00000010161	RBM28	93	84.211	ENSMICG00000000107	RBM28	100	84.488	Microcebus_murinus
ENSCSAG00000010161	RBM28	100	81.209	ENSMOCG00000014615	Rbm28	100	80.815	Microtus_ochrogaster
ENSCSAG00000010161	RBM28	57	54.839	ENSMMOG00000008600	rbm28	99	52.500	Mola_mola
ENSCSAG00000010161	RBM28	100	72.382	ENSMODG00000015151	RBM28	100	72.644	Monodelphis_domestica
ENSCSAG00000010161	RBM28	58	54.102	ENSMALG00000006419	rbm28	63	51.606	Monopterus_albus
ENSCSAG00000010161	RBM28	100	80.395	MGP_CAROLIEiJ_G0028162	Rbm28	100	80.526	Mus_caroli
ENSCSAG00000010161	RBM28	100	80.658	ENSMUSG00000029701	Rbm28	100	80.526	Mus_musculus
ENSCSAG00000010161	RBM28	100	80.921	MGP_PahariEiJ_G0021920	Rbm28	100	80.658	Mus_pahari
ENSCSAG00000010161	RBM28	100	80.921	MGP_SPRETEiJ_G0029162	Rbm28	100	80.789	Mus_spretus
ENSCSAG00000010161	RBM28	100	84.494	ENSMPUG00000006511	RBM28	100	83.706	Mustela_putorius_furo
ENSCSAG00000010161	RBM28	100	83.990	ENSMLUG00000002186	RBM28	100	84.514	Myotis_lucifugus
ENSCSAG00000010161	RBM28	100	81.028	ENSNGAG00000006480	-	100	80.501	Nannospalax_galili
ENSCSAG00000010161	RBM28	100	78.656	ENSNGAG00000017946	-	100	78.261	Nannospalax_galili
ENSCSAG00000010161	RBM28	100	93.194	ENSNLEG00000012307	RBM28	100	100.000	Nomascus_leucogenys
ENSCSAG00000010161	RBM28	81	85.000	ENSMEUG00000009611	RBM28	91	85.000	Notamacropus_eugenii
ENSCSAG00000010161	RBM28	90	77.863	ENSOPRG00000015140	RBM28	90	76.908	Ochotona_princeps
ENSCSAG00000010161	RBM28	100	80.237	ENSODEG00000003213	-	100	79.578	Octodon_degus
ENSCSAG00000010161	RBM28	76	89.673	ENSODEG00000013217	-	83	89.673	Octodon_degus
ENSCSAG00000010161	RBM28	58	52.667	ENSONIG00000014924	rbm28	100	49.365	Oreochromis_niloticus
ENSCSAG00000010161	RBM28	100	62.646	ENSOANG00000000815	-	100	60.124	Ornithorhynchus_anatinus
ENSCSAG00000010161	RBM28	100	81.747	ENSOCUG00000003009	RBM28	100	81.747	Oryctolagus_cuniculus
ENSCSAG00000010161	RBM28	58	55.530	ENSORLG00000009636	rbm28	64	53.074	Oryzias_latipes
ENSCSAG00000010161	RBM28	58	55.079	ENSORLG00020002123	rbm28	99	48.909	Oryzias_latipes_hni
ENSCSAG00000010161	RBM28	99	61.165	ENSORLG00015015030	rbm28	97	59.804	Oryzias_latipes_hsok
ENSCSAG00000010161	RBM28	58	56.984	ENSOMEG00000007801	rbm28	100	50.566	Oryzias_melastigma
ENSCSAG00000010161	RBM28	90	92.500	ENSOGAG00000006011	RBM28	100	92.500	Otolemur_garnettii
ENSCSAG00000010161	RBM28	100	83.596	ENSOARG00000002547	RBM28	100	83.596	Ovis_aries
ENSCSAG00000010161	RBM28	100	94.751	ENSPPAG00000041730	RBM28	100	100.000	Pan_paniscus
ENSCSAG00000010161	RBM28	100	83.816	ENSPPRG00000004420	RBM28	100	100.000	Panthera_pardus
ENSCSAG00000010161	RBM28	100	84.058	ENSPTIG00000008550	RBM28	100	100.000	Panthera_tigris_altaica
ENSCSAG00000010161	RBM28	100	96.063	ENSPTRG00000019659	RBM28	100	100.000	Pan_troglodytes
ENSCSAG00000010161	RBM28	100	98.163	ENSPANG00000022295	RBM28	100	98.163	Papio_anubis
ENSCSAG00000010161	RBM28	99	50.433	ENSPKIG00000023453	rbm28	67	51.619	Paramormyrops_kingsleyae
ENSCSAG00000010161	RBM28	100	77.895	ENSPEMG00000020673	Rbm28	100	77.895	Peromyscus_maniculatus_bairdii
ENSCSAG00000010161	RBM28	100	71.728	ENSPCIG00000012810	RBM28	100	70.926	Phascolarctos_cinereus
ENSCSAG00000010161	RBM28	58	56.125	ENSPFOG00000018209	rbm28	100	49.049	Poecilia_formosa
ENSCSAG00000010161	RBM28	57	55.631	ENSPLAG00000016078	rbm28	96	49.742	Poecilia_latipinna
ENSCSAG00000010161	RBM28	58	56.347	ENSPMEG00000004292	rbm28	100	49.176	Poecilia_mexicana
ENSCSAG00000010161	RBM28	56	54.943	ENSPREG00000014287	rbm28	98	48.249	Poecilia_reticulata
ENSCSAG00000010161	RBM28	100	96.570	ENSPPYG00000017975	RBM28	100	96.570	Pongo_abelii
ENSCSAG00000010161	RBM28	74	76.901	ENSPCAG00000008223	RBM28	83	76.944	Procavia_capensis
ENSCSAG00000010161	RBM28	90	100.000	ENSPCOG00000016797	RBM28	100	100.000	Propithecus_coquereli
ENSCSAG00000010161	RBM28	77	91.628	ENSPVAG00000005443	RBM28	76	91.628	Pteropus_vampyrus
ENSCSAG00000010161	RBM28	100	48.931	ENSPNYG00000014003	rbm28	65	52.515	Pundamilia_nyererei
ENSCSAG00000010161	RBM28	100	79.342	ENSRNOG00000005468	Rbm28	100	79.211	Rattus_norvegicus
ENSCSAG00000010161	RBM28	100	97.510	ENSRBIG00000033990	RBM28	100	100.000	Rhinopithecus_bieti
ENSCSAG00000010161	RBM28	100	97.638	ENSRROG00000040747	RBM28	100	100.000	Rhinopithecus_roxellana
ENSCSAG00000010161	RBM28	85	87.664	ENSSBOG00000012308	RBM28	100	88.976	Saimiri_boliviensis_boliviensis
ENSCSAG00000010161	RBM28	96	67.755	ENSSHAG00000017017	RBM28	99	67.935	Sarcophilus_harrisii
ENSCSAG00000010161	RBM28	56	59.674	ENSSFOG00015001231	rbm28	69	54.420	Scleropages_formosus
ENSCSAG00000010161	RBM28	58	53.075	ENSSMAG00000003885	rbm28	99	51.660	Scophthalmus_maximus
ENSCSAG00000010161	RBM28	58	55.679	ENSSLDG00000020099	rbm28	100	50.064	Seriola_lalandi_dorsalis
ENSCSAG00000010161	RBM28	76	85.213	ENSSARG00000008303	RBM28	81	85.213	Sorex_araneus
ENSCSAG00000010161	RBM28	66	73.529	ENSSPUG00000000838	RBM28	79	73.529	Sphenodon_punctatus
ENSCSAG00000010161	RBM28	57	52.318	ENSSPAG00000023305	rbm28	100	47.757	Stegastes_partitus
ENSCSAG00000010161	RBM28	100	85.375	ENSSSCG00000031847	RBM28	100	85.375	Sus_scrofa
ENSCSAG00000010161	RBM28	99	51.943	ENSTNIG00000017962	rbm28	99	51.760	Tetraodon_nigroviridis
ENSCSAG00000010161	RBM28	86	88.462	ENSTBEG00000012749	RBM28	86	88.462	Tupaia_belangeri
ENSCSAG00000010161	RBM28	100	81.997	ENSTTRG00000013647	RBM28	100	81.866	Tursiops_truncatus
ENSCSAG00000010161	RBM28	100	77.602	ENSUAMG00000006949	RBM28	100	77.953	Ursus_americanus
ENSCSAG00000010161	RBM28	100	85.244	ENSUMAG00000005997	RBM28	100	84.980	Ursus_maritimus
ENSCSAG00000010161	RBM28	88	76.842	ENSVPAG00000008304	RBM28	87	76.241	Vicugna_pacos
ENSCSAG00000010161	RBM28	100	84.848	ENSVVUG00000007270	RBM28	100	84.848	Vulpes_vulpes
ENSCSAG00000010161	RBM28	100	56.226	ENSXETG00000009271	rbm28	100	56.226	Xenopus_tropicalis
ENSCSAG00000010161	RBM28	58	53.531	ENSXCOG00000020357	rbm28	99	51.992	Xiphophorus_couchianus
ENSCSAG00000010161	RBM28	57	54.072	ENSXMAG00000004415	rbm28	100	48.909	Xiphophorus_maculatus