EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000010506 (Gene tree)
Gene ID: 103227979
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 8330 bases
Position: chr22:45848788-45857117
Accession: 103227979
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000006699	PseudoU_synth_2	PF00849.22	7.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000008555	RPUSD3-201	1252	XM_007985154	ENSCSAP00000006699	351 (aa)	XP_007983345	A0A0D9RDL0

Gene Model

Click here to download ENSCSAG00000010506's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000010506's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000010506	RPUSD3	79	30.822	ENSCSAG00000002274	RPUSD4	72	30.822

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000010506	RPUSD3	100	91.738	ENSG00000156990	RPUSD3	100	91.738	Homo_sapiens
ENSCSAG00000010506	RPUSD3	100	79.830	ENSAMEG00000016227	RPUSD3	100	79.830	Ailuropoda_melanoleuca
ENSCSAG00000010506	RPUSD3	81	56.338	ENSACAG00000009836	RPUSD3	81	56.338	Anolis_carolinensis
ENSCSAG00000010506	RPUSD3	78	63.194	ENSANAG00000007127	-	98	63.194	Aotus_nancymaae
ENSCSAG00000010506	RPUSD3	53	86.486	ENSANAG00000038118	-	89	86.486	Aotus_nancymaae
ENSCSAG00000010506	RPUSD3	56	88.832	ENSANAG00000019945	-	79	88.832	Aotus_nancymaae
ENSCSAG00000010506	RPUSD3	98	81.105	ENSBTAG00000007968	RPUSD3	100	81.105	Bos_taurus
ENSCSAG00000010506	RPUSD3	100	79.830	ENSCAFG00000029733	RPUSD3	100	79.830	Canis_familiaris
ENSCSAG00000010506	RPUSD3	100	79.830	ENSCAFG00020008582	RPUSD3	100	79.830	Canis_lupus_dingo
ENSCSAG00000010506	RPUSD3	98	81.105	ENSCHIG00000026027	RPUSD3	100	81.105	Capra_hircus
ENSCSAG00000010506	RPUSD3	98	78.510	ENSTSYG00000009994	RPUSD3	99	78.510	Carlito_syrichta
ENSCSAG00000010506	RPUSD3	74	81.923	ENSCAPG00000017559	RPUSD3	98	81.923	Cavia_aperea
ENSCSAG00000010506	RPUSD3	98	68.406	ENSCPOG00000037956	RPUSD3	91	68.406	Cavia_porcellus
ENSCSAG00000010506	RPUSD3	100	88.319	ENSCCAG00000029530	RPUSD3	100	88.319	Cebus_capucinus
ENSCSAG00000010506	RPUSD3	100	97.436	ENSCATG00000036939	RPUSD3	100	97.436	Cercocebus_atys
ENSCSAG00000010506	RPUSD3	50	84.821	ENSCHOG00000010151	-	67	84.821	Choloepus_hoffmanni
ENSCSAG00000010506	RPUSD3	73	54.086	ENSCPBG00000008825	RPUSD3	95	54.651	Chrysemys_picta_bellii
ENSCSAG00000010506	RPUSD3	100	96.011	ENSCANG00000040711	RPUSD3	100	96.011	Colobus_angolensis_palliatus
ENSCSAG00000010506	RPUSD3	99	72.334	ENSCGRG00001004923	Rpusd3	96	72.334	Cricetulus_griseus_chok1gshd
ENSCSAG00000010506	RPUSD3	95	74.184	ENSCGRG00000018315	Rpusd3	98	74.184	Cricetulus_griseus_crigri
ENSCSAG00000010506	RPUSD3	99	76.286	ENSDNOG00000039160	RPUSD3	93	76.286	Dasypus_novemcinctus
ENSCSAG00000010506	RPUSD3	74	77.736	ENSDORG00000026827	Rpusd3	92	77.736	Dipodomys_ordii
ENSCSAG00000010506	RPUSD3	100	71.875	ENSETEG00000006538	RPUSD3	99	71.875	Echinops_telfairi
ENSCSAG00000010506	RPUSD3	58	38.350	ENSEBUG00000015605	RPUSD3	67	38.350	Eptatretus_burgeri
ENSCSAG00000010506	RPUSD3	100	80.966	ENSEASG00005014160	RPUSD3	97	81.375	Equus_asinus_asinus
ENSCSAG00000010506	RPUSD3	100	82.102	ENSECAG00000019988	RPUSD3	97	82.521	Equus_caballus
ENSCSAG00000010506	RPUSD3	99	56.583	ENSEEUG00000007353	RPUSD3	100	56.583	Erinaceus_europaeus
ENSCSAG00000010506	RPUSD3	100	80.682	ENSFCAG00000014199	RPUSD3	100	80.682	Felis_catus
ENSCSAG00000010506	RPUSD3	77	49.451	ENSFALG00000012968	RPUSD3	99	46.886	Ficedula_albicollis
ENSCSAG00000010506	RPUSD3	75	83.969	ENSFDAG00000008350	RPUSD3	81	83.969	Fukomys_damarensis
ENSCSAG00000010506	RPUSD3	75	54.753	ENSGAGG00000007493	RPUSD3	82	55.682	Gopherus_agassizii
ENSCSAG00000010506	RPUSD3	100	92.023	ENSGGOG00000013120	RPUSD3	100	92.023	Gorilla_gorilla
ENSCSAG00000010506	RPUSD3	93	68.449	ENSHGLG00000011722	RPUSD3	96	68.449	Heterocephalus_glaber_female
ENSCSAG00000010506	RPUSD3	93	68.449	ENSHGLG00100016038	RPUSD3	96	68.449	Heterocephalus_glaber_male
ENSCSAG00000010506	RPUSD3	100	77.841	ENSSTOG00000002125	RPUSD3	99	78.223	Ictidomys_tridecemlineatus
ENSCSAG00000010506	RPUSD3	95	73.235	ENSJJAG00000012679	Rpusd3	99	73.235	Jaculus_jaculus
ENSCSAG00000010506	RPUSD3	98	80.233	ENSLAFG00000017501	RPUSD3	100	80.233	Loxodonta_africana
ENSCSAG00000010506	RPUSD3	100	97.721	ENSMFAG00000032407	RPUSD3	100	97.721	Macaca_fascicularis
ENSCSAG00000010506	RPUSD3	100	93.732	ENSMMUG00000010628	RPUSD3	97	97.749	Macaca_mulatta
ENSCSAG00000010506	RPUSD3	100	97.436	ENSMNEG00000040308	RPUSD3	100	97.436	Macaca_nemestrina
ENSCSAG00000010506	RPUSD3	100	98.006	ENSMLEG00000033940	RPUSD3	100	98.006	Mandrillus_leucophaeus
ENSCSAG00000010506	RPUSD3	94	75.821	ENSMAUG00000015473	Rpusd3	97	75.821	Mesocricetus_auratus
ENSCSAG00000010506	RPUSD3	98	81.105	ENSMICG00000002315	RPUSD3	100	81.105	Microcebus_murinus
ENSCSAG00000010506	RPUSD3	97	72.727	ENSMOCG00000022613	Rpusd3	99	72.727	Microtus_ochrogaster
ENSCSAG00000010506	RPUSD3	86	59.211	ENSMODG00000005210	RPUSD3	80	59.211	Monodelphis_domestica
ENSCSAG00000010506	RPUSD3	98	72.965	MGP_CAROLIEiJ_G0028725	Rpusd3	100	72.965	Mus_caroli
ENSCSAG00000010506	RPUSD3	98	73.256	ENSMUSG00000051169	Rpusd3	100	73.256	Mus_musculus
ENSCSAG00000010506	RPUSD3	98	73.256	MGP_PahariEiJ_G0022476	Rpusd3	100	73.256	Mus_pahari
ENSCSAG00000010506	RPUSD3	98	72.965	MGP_SPRETEiJ_G0029753	Rpusd3	100	72.965	Mus_spretus
ENSCSAG00000010506	RPUSD3	100	76.989	ENSMPUG00000017132	RPUSD3	99	77.364	Mustela_putorius_furo
ENSCSAG00000010506	RPUSD3	98	83.526	ENSMLUG00000006135	RPUSD3	99	83.965	Myotis_lucifugus
ENSCSAG00000010506	RPUSD3	96	74.777	ENSNGAG00000023704	Rpusd3	97	75.375	Nannospalax_galili
ENSCSAG00000010506	RPUSD3	100	77.208	ENSNLEG00000004214	RPUSD3	95	93.532	Nomascus_leucogenys
ENSCSAG00000010506	RPUSD3	74	67.433	ENSMEUG00000013098	-	100	67.433	Notamacropus_eugenii
ENSCSAG00000010506	RPUSD3	96	62.242	ENSOPRG00000002300	RPUSD3	96	62.242	Ochotona_princeps
ENSCSAG00000010506	RPUSD3	75	80.303	ENSODEG00000018137	RPUSD3	90	80.843	Octodon_degus
ENSCSAG00000010506	RPUSD3	82	51.568	ENSOANG00000012081	-	99	51.930	Ornithorhynchus_anatinus
ENSCSAG00000010506	RPUSD3	98	66.952	ENSOCUG00000027885	RPUSD3	100	66.952	Oryctolagus_cuniculus
ENSCSAG00000010506	RPUSD3	89	83.974	ENSOGAG00000012592	RPUSD3	99	83.974	Otolemur_garnettii
ENSCSAG00000010506	RPUSD3	99	81.766	ENSOARG00000005928	RPUSD3	99	81.766	Ovis_aries
ENSCSAG00000010506	RPUSD3	100	91.738	ENSPPAG00000038083	RPUSD3	100	91.738	Pan_paniscus
ENSCSAG00000010506	RPUSD3	100	80.966	ENSPPRG00000024433	RPUSD3	100	80.966	Panthera_pardus
ENSCSAG00000010506	RPUSD3	98	81.977	ENSPTIG00000006828	RPUSD3	100	81.977	Panthera_tigris_altaica
ENSCSAG00000010506	RPUSD3	100	92.023	ENSPTRG00000051760	RPUSD3	100	92.023	Pan_troglodytes
ENSCSAG00000010506	RPUSD3	100	98.575	ENSPANG00000023885	RPUSD3	100	98.575	Papio_anubis
ENSCSAG00000010506	RPUSD3	95	73.824	ENSPEMG00000017245	Rpusd3	99	73.824	Peromyscus_maniculatus_bairdii
ENSCSAG00000010506	RPUSD3	82	64.138	ENSPCIG00000021901	RPUSD3	84	64.138	Phascolarctos_cinereus
ENSCSAG00000010506	RPUSD3	100	92.023	ENSPPYG00000013676	RPUSD3	100	92.023	Pongo_abelii
ENSCSAG00000010506	RPUSD3	82	60.208	ENSPCAG00000013731	-	100	60.208	Procavia_capensis
ENSCSAG00000010506	RPUSD3	100	85.227	ENSPCOG00000018314	RPUSD3	100	85.227	Propithecus_coquereli
ENSCSAG00000010506	RPUSD3	100	79.261	ENSPVAG00000011107	RPUSD3	100	79.261	Pteropus_vampyrus
ENSCSAG00000010506	RPUSD3	98	68.314	ENSRNOG00000009084	Rpusd3	100	68.314	Rattus_norvegicus
ENSCSAG00000010506	RPUSD3	100	96.866	ENSRBIG00000041230	RPUSD3	100	96.866	Rhinopithecus_bieti
ENSCSAG00000010506	RPUSD3	100	97.151	ENSRROG00000043328	RPUSD3	100	97.151	Rhinopithecus_roxellana
ENSCSAG00000010506	RPUSD3	100	88.319	ENSSBOG00000036106	RPUSD3	100	88.319	Saimiri_boliviensis_boliviensis
ENSCSAG00000010506	RPUSD3	88	59.355	ENSSHAG00000015536	RPUSD3	99	59.355	Sarcophilus_harrisii
ENSCSAG00000010506	RPUSD3	100	80.114	ENSSSCG00000011555	RPUSD3	100	80.114	Sus_scrofa
ENSCSAG00000010506	RPUSD3	66	50.215	ENSTGUG00000008744	RPUSD3	93	49.770	Taeniopygia_guttata
ENSCSAG00000010506	RPUSD3	82	78.201	ENSTBEG00000000176	RPUSD3	100	78.201	Tupaia_belangeri
ENSCSAG00000010506	RPUSD3	100	80.114	ENSTTRG00000007544	RPUSD3	100	80.114	Tursiops_truncatus
ENSCSAG00000010506	RPUSD3	89	82.051	ENSUAMG00000011354	RPUSD3	97	82.051	Ursus_americanus
ENSCSAG00000010506	RPUSD3	100	79.545	ENSUMAG00000018830	RPUSD3	100	79.545	Ursus_maritimus
ENSCSAG00000010506	RPUSD3	98	80.523	ENSVVUG00000023735	RPUSD3	100	80.523	Vulpes_vulpes
ENSCSAG00000010506	RPUSD3	80	49.291	ENSXETG00000023546	rpusd3	99	49.291	Xenopus_tropicalis