EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000011052 (Gene tree)
Gene ID: 103227930
Gene Symbol: TRNT1
Alias: CCA1|CGI-47|MtCCA
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 23450 bases
Position: chr22:39222663-39246112
Accession: 103227930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000007272	PolyA_pol	PF01743.20	5.3e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000009146	TRNT1-201	1338	-	ENSCSAP00000007272	434 (aa)	XP_007983238	A0A0D9RF83

Gene Model

Click here to download ENSCSAG00000011052's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000011052's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000011052	TRNT1	100	97.696	ENSG00000072756	TRNT1	100	97.696	Homo_sapiens
ENSCSAG00000011052	TRNT1	93	69.630	ENSAPOG00000013687	trnt1	95	69.630	Acanthochromis_polyacanthus
ENSCSAG00000011052	TRNT1	100	92.661	ENSAMEG00000014520	TRNT1	100	92.661	Ailuropoda_melanoleuca
ENSCSAG00000011052	TRNT1	98	68.471	ENSACIG00000021706	trnt1	99	68.471	Amphilophus_citrinellus
ENSCSAG00000011052	TRNT1	98	68.000	ENSAOCG00000024612	trnt1	99	68.000	Amphiprion_ocellaris
ENSCSAG00000011052	TRNT1	96	60.911	ENSAPEG00000022627	trnt1	97	60.911	Amphiprion_percula
ENSCSAG00000011052	TRNT1	93	71.464	ENSATEG00000008928	trnt1	99	71.464	Anabas_testudineus
ENSCSAG00000011052	TRNT1	88	77.083	ENSAPLG00000004258	TRNT1	95	77.083	Anas_platyrhynchos
ENSCSAG00000011052	TRNT1	98	74.884	ENSACAG00000005657	TRNT1	98	74.884	Anolis_carolinensis
ENSCSAG00000011052	TRNT1	100	97.005	ENSANAG00000024802	TRNT1	100	97.005	Aotus_nancymaae
ENSCSAG00000011052	TRNT1	98	68.310	ENSACLG00000022227	trnt1	99	68.310	Astatotilapia_calliptera
ENSCSAG00000011052	TRNT1	97	69.359	ENSAMXG00000003960	trnt1	97	69.194	Astyanax_mexicanus
ENSCSAG00000011052	TRNT1	100	91.705	ENSBTAG00000019534	TRNT1	100	91.705	Bos_taurus
ENSCSAG00000011052	TRNT1	94	44.181	WBGene00010089	hpo-31	94	44.181	Caenorhabditis_elegans
ENSCSAG00000011052	TRNT1	100	97.005	ENSCJAG00000015466	TRNT1	100	97.005	Callithrix_jacchus
ENSCSAG00000011052	TRNT1	100	92.396	ENSCAFG00000005985	TRNT1	99	92.396	Canis_familiaris
ENSCSAG00000011052	TRNT1	100	92.396	ENSCAFG00020014746	TRNT1	99	92.396	Canis_lupus_dingo
ENSCSAG00000011052	TRNT1	100	91.705	ENSCHIG00000007030	TRNT1	99	91.705	Capra_hircus
ENSCSAG00000011052	TRNT1	100	95.853	ENSTSYG00000013390	TRNT1	100	95.853	Carlito_syrichta
ENSCSAG00000011052	TRNT1	87	75.661	ENSCAPG00000006891	TRNT1	100	75.661	Cavia_aperea
ENSCSAG00000011052	TRNT1	99	92.379	ENSCPOG00000007849	TRNT1	99	92.379	Cavia_porcellus
ENSCSAG00000011052	TRNT1	95	93.029	ENSCCAG00000002919	TRNT1	100	95.012	Cebus_capucinus
ENSCSAG00000011052	TRNT1	99	99.538	ENSCATG00000031985	TRNT1	99	99.538	Cercocebus_atys
ENSCSAG00000011052	TRNT1	99	92.841	ENSCLAG00000005186	TRNT1	99	92.841	Chinchilla_lanigera
ENSCSAG00000011052	TRNT1	85	92.079	ENSCHOG00000005712	TRNT1	85	92.079	Choloepus_hoffmanni
ENSCSAG00000011052	TRNT1	99	79.398	ENSCPBG00000017636	TRNT1	98	79.398	Chrysemys_picta_bellii
ENSCSAG00000011052	TRNT1	93	44.938	ENSCING00000007069	-	99	44.938	Ciona_intestinalis
ENSCSAG00000011052	TRNT1	97	45.047	ENSCSAVG00000007494	-	99	45.047	Ciona_savignyi
ENSCSAG00000011052	TRNT1	100	99.539	ENSCANG00000039030	TRNT1	100	99.539	Colobus_angolensis_palliatus
ENSCSAG00000011052	TRNT1	100	93.088	ENSCGRG00001009998	Trnt1	100	93.088	Cricetulus_griseus_chok1gshd
ENSCSAG00000011052	TRNT1	100	93.088	ENSCGRG00000013410	Trnt1	100	93.088	Cricetulus_griseus_crigri
ENSCSAG00000011052	TRNT1	94	68.966	ENSCSEG00000008157	trnt1	95	68.966	Cynoglossus_semilaevis
ENSCSAG00000011052	TRNT1	94	70.197	ENSCVAG00000019770	trnt1	96	70.197	Cyprinodon_variegatus
ENSCSAG00000011052	TRNT1	94	70.833	ENSDARG00000075297	trnt1	95	70.833	Danio_rerio
ENSCSAG00000011052	TRNT1	100	92.857	ENSDNOG00000008837	TRNT1	100	92.857	Dasypus_novemcinctus
ENSCSAG00000011052	TRNT1	100	90.783	ENSDORG00000014035	Trnt1	100	90.783	Dipodomys_ordii
ENSCSAG00000011052	TRNT1	92	49.257	FBgn0037369	CG2100	83	49.257	Drosophila_melanogaster
ENSCSAG00000011052	TRNT1	57	91.566	ENSETEG00000018177	TRNT1	100	91.566	Echinops_telfairi
ENSCSAG00000011052	TRNT1	93	62.779	ENSEBUG00000012779	-	95	62.779	Eptatretus_burgeri
ENSCSAG00000011052	TRNT1	100	94.931	ENSEASG00005003577	TRNT1	100	94.931	Equus_asinus_asinus
ENSCSAG00000011052	TRNT1	100	95.161	ENSECAG00000014420	TRNT1	100	95.161	Equus_caballus
ENSCSAG00000011052	TRNT1	100	89.401	ENSEEUG00000009567	TRNT1	100	89.401	Erinaceus_europaeus
ENSCSAG00000011052	TRNT1	94	70.833	ENSELUG00000003802	trnt1	95	70.833	Esox_lucius
ENSCSAG00000011052	TRNT1	100	92.396	ENSFCAG00000026805	TRNT1	99	92.396	Felis_catus
ENSCSAG00000011052	TRNT1	89	74.805	ENSFALG00000013539	TRNT1	100	74.805	Ficedula_albicollis
ENSCSAG00000011052	TRNT1	99	93.072	ENSFDAG00000018412	TRNT1	99	93.072	Fukomys_damarensis
ENSCSAG00000011052	TRNT1	94	70.197	ENSFHEG00000019294	trnt1	96	70.197	Fundulus_heteroclitus
ENSCSAG00000011052	TRNT1	93	68.148	ENSGMOG00000007460	trnt1	95	68.148	Gadus_morhua
ENSCSAG00000011052	TRNT1	97	72.535	ENSGALG00000017368	TRNT1	99	72.535	Gallus_gallus
ENSCSAG00000011052	TRNT1	94	69.951	ENSGAFG00000008647	trnt1	96	69.951	Gambusia_affinis
ENSCSAG00000011052	TRNT1	94	68.227	ENSGACG00000011903	trnt1	97	68.041	Gasterosteus_aculeatus
ENSCSAG00000011052	TRNT1	99	79.861	ENSGAGG00000020942	TRNT1	98	79.861	Gopherus_agassizii
ENSCSAG00000011052	TRNT1	100	97.926	ENSGGOG00000015286	TRNT1	100	97.926	Gorilla_gorilla
ENSCSAG00000011052	TRNT1	98	68.310	ENSHBUG00000002797	trnt1	99	68.310	Haplochromis_burtoni
ENSCSAG00000011052	TRNT1	99	92.379	ENSHGLG00000003649	TRNT1	99	92.379	Heterocephalus_glaber_female
ENSCSAG00000011052	TRNT1	99	87.558	ENSHGLG00000000221	-	99	87.558	Heterocephalus_glaber_female
ENSCSAG00000011052	TRNT1	99	91.224	ENSHGLG00100016421	TRNT1	99	91.224	Heterocephalus_glaber_male
ENSCSAG00000011052	TRNT1	94	67.980	ENSHCOG00000010618	trnt1	95	67.980	Hippocampus_comes
ENSCSAG00000011052	TRNT1	96	68.750	ENSIPUG00000000971	trnt1	97	68.750	Ictalurus_punctatus
ENSCSAG00000011052	TRNT1	100	88.710	ENSSTOG00000000150	TRNT1	98	92.079	Ictidomys_tridecemlineatus
ENSCSAG00000011052	TRNT1	100	93.088	ENSJJAG00000018561	Trnt1	99	93.088	Jaculus_jaculus
ENSCSAG00000011052	TRNT1	96	68.160	ENSKMAG00000011307	trnt1	99	68.160	Kryptolebias_marmoratus
ENSCSAG00000011052	TRNT1	94	63.990	ENSLBEG00000019457	trnt1	97	63.990	Labrus_bergylta
ENSCSAG00000011052	TRNT1	99	71.824	ENSLACG00000013227	TRNT1	99	71.824	Latimeria_chalumnae
ENSCSAG00000011052	TRNT1	99	69.954	ENSLOCG00000011105	trnt1	99	69.954	Lepisosteus_oculatus
ENSCSAG00000011052	TRNT1	100	94.931	ENSLAFG00000023191	TRNT1	100	94.931	Loxodonta_africana
ENSCSAG00000011052	TRNT1	99	99.769	ENSMFAG00000045113	TRNT1	99	99.769	Macaca_fascicularis
ENSCSAG00000011052	TRNT1	99	99.769	ENSMMUG00000017983	TRNT1	99	99.769	Macaca_mulatta
ENSCSAG00000011052	TRNT1	99	99.769	ENSMNEG00000037805	TRNT1	99	99.769	Macaca_nemestrina
ENSCSAG00000011052	TRNT1	88	99.738	ENSMLEG00000033671	TRNT1	99	99.738	Mandrillus_leucophaeus
ENSCSAG00000011052	TRNT1	98	68.000	ENSMAMG00000023401	trnt1	99	68.000	Mastacembelus_armatus
ENSCSAG00000011052	TRNT1	98	68.310	ENSMZEG00005009141	trnt1	99	68.310	Maylandia_zebra
ENSCSAG00000011052	TRNT1	74	75.389	ENSMGAG00000009971	TRNT1	100	75.389	Meleagris_gallopavo
ENSCSAG00000011052	TRNT1	100	93.318	ENSMAUG00000020707	Trnt1	100	93.318	Mesocricetus_auratus
ENSCSAG00000011052	TRNT1	100	93.548	ENSMICG00000016615	TRNT1	100	93.548	Microcebus_murinus
ENSCSAG00000011052	TRNT1	100	92.857	ENSMOCG00000004539	Trnt1	100	92.857	Microtus_ochrogaster
ENSCSAG00000011052	TRNT1	95	68.523	ENSMMOG00000010742	trnt1	97	68.523	Mola_mola
ENSCSAG00000011052	TRNT1	100	85.023	ENSMODG00000004368	TRNT1	100	85.023	Monodelphis_domestica
ENSCSAG00000011052	TRNT1	98	67.059	ENSMALG00000008376	trnt1	99	67.059	Monopterus_albus
ENSCSAG00000011052	TRNT1	100	93.548	MGP_CAROLIEiJ_G0028698	Trnt1	100	93.548	Mus_caroli
ENSCSAG00000011052	TRNT1	100	93.548	ENSMUSG00000013736	Trnt1	100	93.548	Mus_musculus
ENSCSAG00000011052	TRNT1	100	92.857	MGP_PahariEiJ_G0022449	Trnt1	100	92.857	Mus_pahari
ENSCSAG00000011052	TRNT1	100	93.548	MGP_SPRETEiJ_G0029726	Trnt1	100	93.548	Mus_spretus
ENSCSAG00000011052	TRNT1	100	92.857	ENSMPUG00000017017	TRNT1	99	92.857	Mustela_putorius_furo
ENSCSAG00000011052	TRNT1	89	88.860	ENSMLUG00000011864	TRNT1	100	88.860	Myotis_lucifugus
ENSCSAG00000011052	TRNT1	100	92.166	ENSNGAG00000000537	Trnt1	100	92.166	Nannospalax_galili
ENSCSAG00000011052	TRNT1	79	67.919	ENSNBRG00000023606	trnt1	99	67.919	Neolamprologus_brichardi
ENSCSAG00000011052	TRNT1	100	98.387	ENSNLEG00000003226	TRNT1	100	98.387	Nomascus_leucogenys
ENSCSAG00000011052	TRNT1	100	85.023	ENSMEUG00000004684	TRNT1	100	85.023	Notamacropus_eugenii
ENSCSAG00000011052	TRNT1	88	79.896	ENSOPRG00000015067	TRNT1	99	79.896	Ochotona_princeps
ENSCSAG00000011052	TRNT1	99	92.379	ENSODEG00000007597	TRNT1	99	92.379	Octodon_degus
ENSCSAG00000011052	TRNT1	98	68.545	ENSONIG00000020273	trnt1	98	68.545	Oreochromis_niloticus
ENSCSAG00000011052	TRNT1	99	75.231	ENSOANG00000007514	TRNT1	99	75.231	Ornithorhynchus_anatinus
ENSCSAG00000011052	TRNT1	100	85.253	ENSOCUG00000008580	TRNT1	99	85.253	Oryctolagus_cuniculus
ENSCSAG00000011052	TRNT1	94	68.227	ENSORLG00000003165	trnt1	96	68.227	Oryzias_latipes
ENSCSAG00000011052	TRNT1	94	68.473	ENSORLG00020022060	trnt1	96	68.473	Oryzias_latipes_hni
ENSCSAG00000011052	TRNT1	98	65.412	ENSORLG00015018915	trnt1	99	65.412	Oryzias_latipes_hsok
ENSCSAG00000011052	TRNT1	95	66.019	ENSOMEG00000003331	trnt1	97	66.019	Oryzias_melastigma
ENSCSAG00000011052	TRNT1	100	91.475	ENSOARG00000008631	TRNT1	99	91.475	Ovis_aries
ENSCSAG00000011052	TRNT1	100	97.926	ENSPPAG00000043566	TRNT1	100	97.926	Pan_paniscus
ENSCSAG00000011052	TRNT1	99	92.841	ENSPPRG00000001327	TRNT1	99	92.841	Panthera_pardus
ENSCSAG00000011052	TRNT1	100	92.396	ENSPTIG00000011448	TRNT1	99	92.396	Panthera_tigris_altaica
ENSCSAG00000011052	TRNT1	100	97.926	ENSPTRG00000014564	TRNT1	100	97.926	Pan_troglodytes
ENSCSAG00000011052	TRNT1	99	99.538	ENSPANG00000025944	TRNT1	99	99.538	Papio_anubis
ENSCSAG00000011052	TRNT1	98	69.626	ENSPKIG00000020015	trnt1	98	69.626	Paramormyrops_kingsleyae
ENSCSAG00000011052	TRNT1	91	81.612	ENSPSIG00000017356	TRNT1	99	83.333	Pelodiscus_sinensis
ENSCSAG00000011052	TRNT1	98	66.588	ENSPMGG00000008888	trnt1	98	66.588	Periophthalmus_magnuspinnatus
ENSCSAG00000011052	TRNT1	100	94.009	ENSPEMG00000019845	Trnt1	100	94.009	Peromyscus_maniculatus_bairdii
ENSCSAG00000011052	TRNT1	100	85.253	ENSPCIG00000030436	TRNT1	100	85.253	Phascolarctos_cinereus
ENSCSAG00000011052	TRNT1	94	69.704	ENSPFOG00000006194	trnt1	95	69.704	Poecilia_formosa
ENSCSAG00000011052	TRNT1	94	69.704	ENSPLAG00000015623	trnt1	99	69.479	Poecilia_latipinna
ENSCSAG00000011052	TRNT1	94	69.704	ENSPMEG00000012216	trnt1	99	69.479	Poecilia_mexicana
ENSCSAG00000011052	TRNT1	94	69.024	ENSPREG00000021470	trnt1	96	69.024	Poecilia_reticulata
ENSCSAG00000011052	TRNT1	100	97.696	ENSPPYG00000013702	TRNT1	100	97.696	Pongo_abelii
ENSCSAG00000011052	TRNT1	88	93.473	ENSPCAG00000001951	TRNT1	100	93.473	Procavia_capensis
ENSCSAG00000011052	TRNT1	100	94.931	ENSPCOG00000022228	TRNT1	100	94.931	Propithecus_coquereli
ENSCSAG00000011052	TRNT1	88	93.750	ENSPVAG00000008784	TRNT1	100	93.750	Pteropus_vampyrus
ENSCSAG00000011052	TRNT1	98	68.310	ENSPNYG00000003120	trnt1	99	68.310	Pundamilia_nyererei
ENSCSAG00000011052	TRNT1	98	67.209	ENSPNAG00000000565	trnt1	99	67.209	Pygocentrus_nattereri
ENSCSAG00000011052	TRNT1	100	93.318	ENSRNOG00000006432	Trnt1	100	93.318	Rattus_norvegicus
ENSCSAG00000011052	TRNT1	100	97.005	ENSRBIG00000042632	TRNT1	100	97.005	Rhinopithecus_bieti
ENSCSAG00000011052	TRNT1	100	99.309	ENSRROG00000036866	TRNT1	100	99.309	Rhinopithecus_roxellana
ENSCSAG00000011052	TRNT1	100	97.005	ENSSBOG00000021208	TRNT1	100	97.005	Saimiri_boliviensis_boliviensis
ENSCSAG00000011052	TRNT1	100	85.023	ENSSHAG00000018861	TRNT1	100	85.023	Sarcophilus_harrisii
ENSCSAG00000011052	TRNT1	99	68.433	ENSSFOG00015020844	trnt1	99	68.925	Scleropages_formosus
ENSCSAG00000011052	TRNT1	98	67.294	ENSSMAG00000015432	trnt1	97	67.294	Scophthalmus_maximus
ENSCSAG00000011052	TRNT1	98	67.606	ENSSDUG00000012320	trnt1	99	67.606	Seriola_dumerili
ENSCSAG00000011052	TRNT1	56	64.730	ENSSLDG00000016463	-	91	64.854	Seriola_lalandi_dorsalis
ENSCSAG00000011052	TRNT1	98	67.606	ENSSLDG00000009325	trnt1	99	67.606	Seriola_lalandi_dorsalis
ENSCSAG00000011052	TRNT1	88	82.031	ENSSPUG00000014153	TRNT1	100	82.031	Sphenodon_punctatus
ENSCSAG00000011052	TRNT1	98	67.059	ENSSPAG00000021005	trnt1	99	67.059	Stegastes_partitus
ENSCSAG00000011052	TRNT1	100	93.548	ENSSSCG00000011529	TRNT1	100	93.548	Sus_scrofa
ENSCSAG00000011052	TRNT1	93	74.568	ENSTGUG00000010192	TRNT1	99	74.568	Taeniopygia_guttata
ENSCSAG00000011052	TRNT1	94	70.443	ENSTRUG00000001088	trnt1	95	70.443	Takifugu_rubripes
ENSCSAG00000011052	TRNT1	94	70.197	ENSTNIG00000007363	trnt1	94	70.197	Tetraodon_nigroviridis
ENSCSAG00000011052	TRNT1	70	79.775	ENSTBEG00000006367	TRNT1	100	79.775	Tupaia_belangeri
ENSCSAG00000011052	TRNT1	100	91.935	ENSTTRG00000007803	TRNT1	100	91.935	Tursiops_truncatus
ENSCSAG00000011052	TRNT1	100	92.857	ENSUAMG00000022574	TRNT1	99	92.857	Ursus_americanus
ENSCSAG00000011052	TRNT1	100	93.318	ENSUMAG00000024092	TRNT1	99	93.318	Ursus_maritimus
ENSCSAG00000011052	TRNT1	100	92.627	ENSVVUG00000012810	TRNT1	99	92.627	Vulpes_vulpes
ENSCSAG00000011052	TRNT1	95	64.904	ENSXETG00000025091	trnt1	99	66.169	Xenopus_tropicalis
ENSCSAG00000011052	TRNT1	94	69.951	ENSXCOG00000010150	trnt1	96	69.951	Xiphophorus_couchianus
ENSCSAG00000011052	TRNT1	94	69.458	ENSXMAG00000002227	trnt1	96	69.458	Xiphophorus_maculatus