EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000011300 (Gene tree)
Gene ID: 103229566
Gene Symbol: CPSF2
Alias: CPSF100|KIAA1367
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 40096 bases
Position: chr24:69877446-69917541
Accession: 103229566
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000007506	Beta-Casp	PF10996.8	6.1e-21	1	1
ENSCSAP00000007506	Lactamase_B	PF00753.27	1e-06	1	1
ENSCSAP00000007506	RMMBL	PF07521.12	7.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000009388	CPSF2-201	6794	-	ENSCSAP00000007506	782 (aa)	XP_007985819	A0A0D9RFW7

Gene Model

Click here to download ENSCSAG00000011300's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000011300's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000011300	CPSF2	100	99.872	ENSG00000165934	CPSF2	100	100.000	Homo_sapiens
ENSCSAG00000011300	CPSF2	100	85.932	ENSAPOG00000001242	cpsf2	100	85.932	Acanthochromis_polyacanthus
ENSCSAG00000011300	CPSF2	100	86.329	ENSACIG00000009331	cpsf2	100	86.329	Amphilophus_citrinellus
ENSCSAG00000011300	CPSF2	100	86.058	ENSAOCG00000014095	cpsf2	100	86.058	Amphiprion_ocellaris
ENSCSAG00000011300	CPSF2	100	86.058	ENSAPEG00000009158	cpsf2	100	86.058	Amphiprion_percula
ENSCSAG00000011300	CPSF2	96	86.316	ENSATEG00000017644	cpsf2	100	84.474	Anabas_testudineus
ENSCSAG00000011300	CPSF2	100	96.178	ENSAPLG00000006330	CPSF2	100	96.178	Anas_platyrhynchos
ENSCSAG00000011300	CPSF2	100	95.147	ENSACAG00000009245	CPSF2	100	95.147	Anolis_carolinensis
ENSCSAG00000011300	CPSF2	100	99.872	ENSANAG00000022915	CPSF2	100	99.872	Aotus_nancymaae
ENSCSAG00000011300	CPSF2	100	85.769	ENSAMXG00000018696	cpsf2	100	85.769	Astyanax_mexicanus
ENSCSAG00000011300	CPSF2	100	99.744	ENSBTAG00000010227	CPSF2	100	99.744	Bos_taurus
ENSCSAG00000011300	CPSF2	100	41.569	WBGene00017313	cpsf-2	100	41.032	Caenorhabditis_elegans
ENSCSAG00000011300	CPSF2	100	99.872	ENSCJAG00000018069	CPSF2	100	99.872	Callithrix_jacchus
ENSCSAG00000011300	CPSF2	100	99.744	ENSCAFG00000010909	CPSF2	100	99.744	Canis_familiaris
ENSCSAG00000011300	CPSF2	100	99.744	ENSCAFG00020020670	CPSF2	100	99.744	Canis_lupus_dingo
ENSCSAG00000011300	CPSF2	100	99.744	ENSCHIG00000023848	CPSF2	100	99.744	Capra_hircus
ENSCSAG00000011300	CPSF2	100	98.721	ENSTSYG00000009036	CPSF2	100	98.721	Carlito_syrichta
ENSCSAG00000011300	CPSF2	100	99.872	ENSCPOG00000010899	CPSF2	100	99.872	Cavia_porcellus
ENSCSAG00000011300	CPSF2	100	99.872	ENSCCAG00000028088	CPSF2	100	99.872	Cebus_capucinus
ENSCSAG00000011300	CPSF2	100	100.000	ENSCATG00000030132	CPSF2	100	100.000	Cercocebus_atys
ENSCSAG00000011300	CPSF2	100	99.744	ENSCLAG00000012404	CPSF2	100	99.744	Chinchilla_lanigera
ENSCSAG00000011300	CPSF2	100	92.711	ENSCHOG00000012904	CPSF2	100	92.711	Choloepus_hoffmanni
ENSCSAG00000011300	CPSF2	100	96.424	ENSCPBG00000008766	CPSF2	97	96.424	Chrysemys_picta_bellii
ENSCSAG00000011300	CPSF2	100	54.795	ENSCING00000007881	-	100	54.421	Ciona_intestinalis
ENSCSAG00000011300	CPSF2	94	100.000	ENSCANG00000041651	CPSF2	100	100.000	Colobus_angolensis_palliatus
ENSCSAG00000011300	CPSF2	100	98.593	ENSCGRG00001006901	Cpsf2	100	98.593	Cricetulus_griseus_chok1gshd
ENSCSAG00000011300	CPSF2	100	98.593	ENSCGRG00000012416	Cpsf2	100	98.593	Cricetulus_griseus_crigri
ENSCSAG00000011300	CPSF2	100	83.904	ENSCSEG00000004116	cpsf2	100	83.904	Cynoglossus_semilaevis
ENSCSAG00000011300	CPSF2	100	85.298	ENSCVAG00000000095	cpsf2	100	85.425	Cyprinodon_variegatus
ENSCSAG00000011300	CPSF2	100	85.696	ENSDARG00000028971	cpsf2	100	85.696	Danio_rerio
ENSCSAG00000011300	CPSF2	100	99.616	ENSDNOG00000042757	CPSF2	100	99.616	Dasypus_novemcinctus
ENSCSAG00000011300	CPSF2	100	99.488	ENSDORG00000013709	Cpsf2	100	99.488	Dipodomys_ordii
ENSCSAG00000011300	CPSF2	100	53.923	FBgn0027873	Cpsf100	100	53.808	Drosophila_melanogaster
ENSCSAG00000011300	CPSF2	100	90.421	ENSETEG00000012123	CPSF2	100	90.421	Echinops_telfairi
ENSCSAG00000011300	CPSF2	52	76.471	ENSEBUG00000012098	cpsf2	93	76.471	Eptatretus_burgeri
ENSCSAG00000011300	CPSF2	91	97.611	ENSEASG00005021193	CPSF2	100	97.611	Equus_asinus_asinus
ENSCSAG00000011300	CPSF2	100	99.616	ENSECAG00000023935	CPSF2	100	99.616	Equus_caballus
ENSCSAG00000011300	CPSF2	100	84.065	ENSELUG00000008442	cpsf2	100	84.065	Esox_lucius
ENSCSAG00000011300	CPSF2	100	99.616	ENSFCAG00000007886	CPSF2	100	99.616	Felis_catus
ENSCSAG00000011300	CPSF2	100	96.424	ENSFALG00000002412	CPSF2	100	96.424	Ficedula_albicollis
ENSCSAG00000011300	CPSF2	100	99.744	ENSFDAG00000006327	CPSF2	100	99.744	Fukomys_damarensis
ENSCSAG00000011300	CPSF2	96	84.575	ENSFHEG00000015465	cpsf2	98	84.837	Fundulus_heteroclitus
ENSCSAG00000011300	CPSF2	100	83.586	ENSGMOG00000008761	cpsf2	100	83.586	Gadus_morhua
ENSCSAG00000011300	CPSF2	100	95.658	ENSGALG00000010783	CPSF2	100	96.169	Gallus_gallus
ENSCSAG00000011300	CPSF2	100	85.551	ENSGAFG00000001407	cpsf2	100	85.551	Gambusia_affinis
ENSCSAG00000011300	CPSF2	100	84.664	ENSGACG00000008418	cpsf2	100	84.664	Gasterosteus_aculeatus
ENSCSAG00000011300	CPSF2	100	96.552	ENSGAGG00000008287	CPSF2	100	96.552	Gopherus_agassizii
ENSCSAG00000011300	CPSF2	100	99.872	ENSGGOG00000011799	CPSF2	100	99.872	Gorilla_gorilla
ENSCSAG00000011300	CPSF2	100	85.298	ENSHBUG00000023466	cpsf2	100	85.298	Haplochromis_burtoni
ENSCSAG00000011300	CPSF2	100	99.616	ENSHGLG00000018311	CPSF2	100	99.616	Heterocephalus_glaber_female
ENSCSAG00000011300	CPSF2	100	99.616	ENSHGLG00100016460	CPSF2	100	99.616	Heterocephalus_glaber_male
ENSCSAG00000011300	CPSF2	100	84.664	ENSHCOG00000019527	cpsf2	98	84.664	Hippocampus_comes
ENSCSAG00000011300	CPSF2	100	85.769	ENSIPUG00000020857	cpsf2	100	85.769	Ictalurus_punctatus
ENSCSAG00000011300	CPSF2	100	99.744	ENSSTOG00000009528	CPSF2	100	99.744	Ictidomys_tridecemlineatus
ENSCSAG00000011300	CPSF2	100	99.361	ENSJJAG00000017925	Cpsf2	100	99.361	Jaculus_jaculus
ENSCSAG00000011300	CPSF2	100	84.791	ENSKMAG00000019429	cpsf2	100	84.791	Kryptolebias_marmoratus
ENSCSAG00000011300	CPSF2	95	84.203	ENSLBEG00000011585	cpsf2	100	84.358	Labrus_bergylta
ENSCSAG00000011300	CPSF2	100	89.527	ENSLACG00000019024	CPSF2	100	90.038	Latimeria_chalumnae
ENSCSAG00000011300	CPSF2	100	87.833	ENSLOCG00000014102	cpsf2	100	87.833	Lepisosteus_oculatus
ENSCSAG00000011300	CPSF2	100	99.362	ENSLAFG00000004891	CPSF2	100	99.362	Loxodonta_africana
ENSCSAG00000011300	CPSF2	100	100.000	ENSMFAG00000041212	CPSF2	100	100.000	Macaca_fascicularis
ENSCSAG00000011300	CPSF2	100	100.000	ENSMMUG00000000699	CPSF2	100	100.000	Macaca_mulatta
ENSCSAG00000011300	CPSF2	100	100.000	ENSMNEG00000031584	CPSF2	100	100.000	Macaca_nemestrina
ENSCSAG00000011300	CPSF2	100	100.000	ENSMLEG00000029394	CPSF2	100	100.000	Mandrillus_leucophaeus
ENSCSAG00000011300	CPSF2	100	85.932	ENSMAMG00000004235	cpsf2	100	85.932	Mastacembelus_armatus
ENSCSAG00000011300	CPSF2	100	85.425	ENSMZEG00005001769	cpsf2	100	85.425	Maylandia_zebra
ENSCSAG00000011300	CPSF2	100	95.663	ENSMGAG00000013122	CPSF2	100	96.173	Meleagris_gallopavo
ENSCSAG00000011300	CPSF2	100	98.593	ENSMAUG00000015160	Cpsf2	100	98.593	Mesocricetus_auratus
ENSCSAG00000011300	CPSF2	100	99.872	ENSMICG00000016441	CPSF2	100	99.872	Microcebus_murinus
ENSCSAG00000011300	CPSF2	100	98.593	ENSMOCG00000015372	Cpsf2	100	98.593	Microtus_ochrogaster
ENSCSAG00000011300	CPSF2	100	81.115	ENSMMOG00000015590	cpsf2	100	81.115	Mola_mola
ENSCSAG00000011300	CPSF2	100	98.977	ENSMODG00000002042	CPSF2	100	98.977	Monodelphis_domestica
ENSCSAG00000011300	CPSF2	100	82.763	ENSMALG00000022275	cpsf2	100	82.763	Monopterus_albus
ENSCSAG00000011300	CPSF2	100	98.082	ENSMUSG00000041781	Cpsf2	100	98.082	Mus_musculus
ENSCSAG00000011300	CPSF2	100	98.338	MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	Mus_pahari
ENSCSAG00000011300	CPSF2	100	98.082	MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	Mus_spretus
ENSCSAG00000011300	CPSF2	100	99.744	ENSMPUG00000007617	CPSF2	98	99.744	Mustela_putorius_furo
ENSCSAG00000011300	CPSF2	100	98.977	ENSMLUG00000005570	CPSF2	100	98.977	Myotis_lucifugus
ENSCSAG00000011300	CPSF2	100	99.105	ENSNGAG00000020312	Cpsf2	100	99.105	Nannospalax_galili
ENSCSAG00000011300	CPSF2	100	85.805	ENSNBRG00000022402	cpsf2	100	85.805	Neolamprologus_brichardi
ENSCSAG00000011300	CPSF2	100	98.977	ENSNLEG00000017132	CPSF2	100	98.977	Nomascus_leucogenys
ENSCSAG00000011300	CPSF2	91	99.676	ENSMEUG00000008138	CPSF2	91	99.676	Notamacropus_eugenii
ENSCSAG00000011300	CPSF2	94	91.667	ENSOPRG00000008484	-	100	91.667	Ochotona_princeps
ENSCSAG00000011300	CPSF2	100	99.488	ENSODEG00000008682	CPSF2	100	99.488	Octodon_degus
ENSCSAG00000011300	CPSF2	100	86.185	ENSONIG00000005901	cpsf2	100	86.185	Oreochromis_niloticus
ENSCSAG00000011300	CPSF2	100	98.593	ENSOANG00000003822	CPSF2	100	98.593	Ornithorhynchus_anatinus
ENSCSAG00000011300	CPSF2	100	99.361	ENSOCUG00000005713	CPSF2	100	99.361	Oryctolagus_cuniculus
ENSCSAG00000011300	CPSF2	100	80.101	ENSORLG00000011628	cpsf2	100	80.101	Oryzias_latipes
ENSCSAG00000011300	CPSF2	100	84.918	ENSORLG00020016980	cpsf2	100	84.918	Oryzias_latipes_hni
ENSCSAG00000011300	CPSF2	100	84.918	ENSORLG00015011910	cpsf2	100	84.918	Oryzias_latipes_hsok
ENSCSAG00000011300	CPSF2	100	84.157	ENSOMEG00000022876	cpsf2	100	84.157	Oryzias_melastigma
ENSCSAG00000011300	CPSF2	100	96.684	ENSOARG00000012889	CPSF2	100	96.684	Ovis_aries
ENSCSAG00000011300	CPSF2	100	99.872	ENSPPAG00000039666	CPSF2	100	99.872	Pan_paniscus
ENSCSAG00000011300	CPSF2	99	99.616	ENSPPRG00000010869	CPSF2	100	99.616	Panthera_pardus
ENSCSAG00000011300	CPSF2	100	99.616	ENSPTIG00000021202	CPSF2	100	99.616	Panthera_tigris_altaica
ENSCSAG00000011300	CPSF2	100	99.872	ENSPTRG00000006651	CPSF2	100	99.872	Pan_troglodytes
ENSCSAG00000011300	CPSF2	100	100.000	ENSPANG00000017417	CPSF2	100	100.000	Papio_anubis
ENSCSAG00000011300	CPSF2	100	82.211	ENSPKIG00000021453	cpsf2	100	82.211	Paramormyrops_kingsleyae
ENSCSAG00000011300	CPSF2	100	95.913	ENSPSIG00000006289	CPSF2	100	95.913	Pelodiscus_sinensis
ENSCSAG00000011300	CPSF2	76	79.734	ENSPMGG00000002511	cpsf2	100	79.900	Periophthalmus_magnuspinnatus
ENSCSAG00000011300	CPSF2	100	98.849	ENSPEMG00000007917	Cpsf2	100	98.849	Peromyscus_maniculatus_bairdii
ENSCSAG00000011300	CPSF2	100	74.336	ENSPMAG00000006205	cpsf2	100	74.336	Petromyzon_marinus
ENSCSAG00000011300	CPSF2	100	98.977	ENSPCIG00000011393	CPSF2	100	98.977	Phascolarctos_cinereus
ENSCSAG00000011300	CPSF2	100	85.425	ENSPFOG00000018648	cpsf2	100	85.425	Poecilia_formosa
ENSCSAG00000011300	CPSF2	100	85.425	ENSPLAG00000019199	cpsf2	99	85.425	Poecilia_latipinna
ENSCSAG00000011300	CPSF2	96	85.789	ENSPMEG00000012100	cpsf2	100	85.160	Poecilia_mexicana
ENSCSAG00000011300	CPSF2	100	85.298	ENSPREG00000008960	cpsf2	100	85.298	Poecilia_reticulata
ENSCSAG00000011300	CPSF2	63	99.798	ENSPPYG00000029685	-	100	99.798	Pongo_abelii
ENSCSAG00000011300	CPSF2	100	99.361	ENSPCAG00000012477	CPSF2	100	99.361	Procavia_capensis
ENSCSAG00000011300	CPSF2	100	99.872	ENSPCOG00000026387	CPSF2	100	99.872	Propithecus_coquereli
ENSCSAG00000011300	CPSF2	65	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
ENSCSAG00000011300	CPSF2	100	85.443	ENSPNYG00000023356	cpsf2	100	85.443	Pundamilia_nyererei
ENSCSAG00000011300	CPSF2	100	86.912	ENSPNAG00000001849	cpsf2	100	86.912	Pygocentrus_nattereri
ENSCSAG00000011300	CPSF2	100	98.465	ENSRNOG00000005733	Cpsf2	100	98.465	Rattus_norvegicus
ENSCSAG00000011300	CPSF2	100	100.000	ENSRBIG00000044792	CPSF2	100	100.000	Rhinopithecus_bieti
ENSCSAG00000011300	CPSF2	100	100.000	ENSRROG00000034875	CPSF2	100	100.000	Rhinopithecus_roxellana
ENSCSAG00000011300	CPSF2	100	99.872	ENSSBOG00000024571	CPSF2	100	99.872	Saimiri_boliviensis_boliviensis
ENSCSAG00000011300	CPSF2	100	99.105	ENSSHAG00000010458	CPSF2	100	99.105	Sarcophilus_harrisii
ENSCSAG00000011300	CPSF2	100	87.421	ENSSFOG00015002117	cpsf2	100	87.421	Scleropages_formosus
ENSCSAG00000011300	CPSF2	100	84.157	ENSSMAG00000002001	cpsf2	100	84.157	Scophthalmus_maximus
ENSCSAG00000011300	CPSF2	100	86.312	ENSSDUG00000004084	cpsf2	100	86.312	Seriola_dumerili
ENSCSAG00000011300	CPSF2	100	85.805	ENSSLDG00000024330	cpsf2	100	85.805	Seriola_lalandi_dorsalis
ENSCSAG00000011300	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSCSAG00000011300	CPSF2	100	95.913	ENSSPUG00000013485	CPSF2	100	95.913	Sphenodon_punctatus
ENSCSAG00000011300	CPSF2	100	85.298	ENSSPAG00000013284	cpsf2	100	85.298	Stegastes_partitus
ENSCSAG00000011300	CPSF2	100	99.616	ENSSSCG00000002447	CPSF2	100	99.616	Sus_scrofa
ENSCSAG00000011300	CPSF2	100	96.552	ENSTGUG00000012571	-	100	96.552	Taeniopygia_guttata
ENSCSAG00000011300	CPSF2	100	84.791	ENSTRUG00000003742	cpsf2	100	84.791	Takifugu_rubripes
ENSCSAG00000011300	CPSF2	100	83.565	ENSTNIG00000012228	cpsf2	100	84.324	Tetraodon_nigroviridis
ENSCSAG00000011300	CPSF2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSCSAG00000011300	CPSF2	88	100.000	ENSTTRG00000008697	CPSF2	88	100.000	Tursiops_truncatus
ENSCSAG00000011300	CPSF2	100	99.872	ENSUAMG00000028071	CPSF2	100	99.872	Ursus_americanus
ENSCSAG00000011300	CPSF2	100	99.872	ENSUMAG00000005029	CPSF2	100	99.872	Ursus_maritimus
ENSCSAG00000011300	CPSF2	99	99.744	ENSVPAG00000003503	CPSF2	100	99.744	Vicugna_pacos
ENSCSAG00000011300	CPSF2	100	99.744	ENSVVUG00000024642	CPSF2	100	99.744	Vulpes_vulpes
ENSCSAG00000011300	CPSF2	100	92.209	ENSXETG00000010289	cpsf2	100	92.209	Xenopus_tropicalis
ENSCSAG00000011300	CPSF2	100	85.805	ENSXCOG00000001764	cpsf2	100	85.805	Xiphophorus_couchianus
ENSCSAG00000011300	CPSF2	100	85.932	ENSXMAG00000017048	cpsf2	100	85.932	Xiphophorus_maculatus