EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000011513 (Gene tree)
Gene ID: 103214895
Gene Symbol: POLR3F
Alias: RPC39|RPC6
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 18826 bases
Position: chr2:47528587-47547412
Accession: 103214895
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000007709	RNA_pol_Rpc34	PF05158.12	8.6e-106	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000009598	POLR3F-201	2701	-	ENSCSAP00000007709	316 (aa)	XP_007959289	A0A0D9RGH0

Gene Model

Click here to download ENSCSAG00000011513's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03020	RNA polymerase	KEGG
csab04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000011513's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000011513	POLR3F	100	99.684	ENSG00000132664	POLR3F	100	99.684	Homo_sapiens
ENSCSAG00000011513	POLR3F	100	85.443	ENSAPOG00000008271	polr3f	100	85.443	Acanthochromis_polyacanthus
ENSCSAG00000011513	POLR3F	100	99.367	ENSAMEG00000005222	POLR3F	100	99.367	Ailuropoda_melanoleuca
ENSCSAG00000011513	POLR3F	100	80.380	ENSACIG00000006705	polr3f	100	80.380	Amphilophus_citrinellus
ENSCSAG00000011513	POLR3F	100	86.076	ENSAOCG00000000687	polr3f	100	86.076	Amphiprion_ocellaris
ENSCSAG00000011513	POLR3F	100	85.759	ENSAPEG00000015263	polr3f	100	85.759	Amphiprion_percula
ENSCSAG00000011513	POLR3F	87	89.091	ENSATEG00000015539	polr3f	100	89.091	Anabas_testudineus
ENSCSAG00000011513	POLR3F	87	95.636	ENSAPLG00000005533	POLR3F	100	95.636	Anas_platyrhynchos
ENSCSAG00000011513	POLR3F	96	92.739	ENSACAG00000014293	POLR3F	98	92.739	Anolis_carolinensis
ENSCSAG00000011513	POLR3F	100	99.367	ENSANAG00000026726	POLR3F	100	99.367	Aotus_nancymaae
ENSCSAG00000011513	POLR3F	100	86.709	ENSACLG00000003615	polr3f	100	86.709	Astatotilapia_calliptera
ENSCSAG00000011513	POLR3F	100	87.342	ENSAMXG00000036020	polr3f	100	87.342	Astyanax_mexicanus
ENSCSAG00000011513	POLR3F	100	99.684	ENSBTAG00000008825	POLR3F	100	99.684	Bos_taurus
ENSCSAG00000011513	POLR3F	94	33.779	WBGene00021112	W09C3.4	95	33.779	Caenorhabditis_elegans
ENSCSAG00000011513	POLR3F	100	99.367	ENSCJAG00000005159	POLR3F	100	99.367	Callithrix_jacchus
ENSCSAG00000011513	POLR3F	100	99.051	ENSCAFG00000005420	POLR3F	100	99.051	Canis_familiaris
ENSCSAG00000011513	POLR3F	100	99.051	ENSCAFG00020027500	POLR3F	100	99.051	Canis_lupus_dingo
ENSCSAG00000011513	POLR3F	100	99.684	ENSCHIG00000014743	POLR3F	100	99.684	Capra_hircus
ENSCSAG00000011513	POLR3F	100	99.367	ENSTSYG00000004207	POLR3F	100	99.367	Carlito_syrichta
ENSCSAG00000011513	POLR3F	93	56.081	ENSCAPG00000008423	POLR3F	100	56.081	Cavia_aperea
ENSCSAG00000011513	POLR3F	100	98.734	ENSCPOG00000002400	POLR3F	100	98.734	Cavia_porcellus
ENSCSAG00000011513	POLR3F	100	88.291	ENSCCAG00000021800	POLR3F	100	88.291	Cebus_capucinus
ENSCSAG00000011513	POLR3F	100	100.000	ENSCATG00000019507	POLR3F	100	100.000	Cercocebus_atys
ENSCSAG00000011513	POLR3F	100	99.367	ENSCLAG00000016296	POLR3F	100	99.367	Chinchilla_lanigera
ENSCSAG00000011513	POLR3F	73	98.601	ENSCHOG00000013268	POLR3F	73	98.601	Choloepus_hoffmanni
ENSCSAG00000011513	POLR3F	87	94.182	ENSCPBG00000023473	POLR3F	100	94.182	Chrysemys_picta_bellii
ENSCSAG00000011513	POLR3F	99	60.952	ENSCING00000001212	-	99	60.952	Ciona_intestinalis
ENSCSAG00000011513	POLR3F	70	59.193	ENSCSAVG00000003340	-	96	66.272	Ciona_savignyi
ENSCSAG00000011513	POLR3F	92	100.000	ENSCANG00000037390	POLR3F	100	100.000	Colobus_angolensis_palliatus
ENSCSAG00000011513	POLR3F	100	98.418	ENSCGRG00001002032	Polr3f	100	98.418	Cricetulus_griseus_chok1gshd
ENSCSAG00000011513	POLR3F	100	98.418	ENSCGRG00000010852	Polr3f	100	98.418	Cricetulus_griseus_crigri
ENSCSAG00000011513	POLR3F	100	84.494	ENSCSEG00000001247	polr3f	100	84.494	Cynoglossus_semilaevis
ENSCSAG00000011513	POLR3F	100	85.443	ENSCVAG00000007611	polr3f	100	85.443	Cyprinodon_variegatus
ENSCSAG00000011513	POLR3F	100	88.291	ENSDARG00000012572	polr3f	100	88.291	Danio_rerio
ENSCSAG00000011513	POLR3F	100	96.203	ENSDNOG00000010719	POLR3F	100	96.203	Dasypus_novemcinctus
ENSCSAG00000011513	POLR3F	100	99.051	ENSDORG00000016352	Polr3f	100	99.051	Dipodomys_ordii
ENSCSAG00000011513	POLR3F	95	49.333	FBgn0038951	CG5380	99	49.333	Drosophila_melanogaster
ENSCSAG00000011513	POLR3F	89	61.210	ENSETEG00000015485	-	100	61.210	Echinops_telfairi
ENSCSAG00000011513	POLR3F	96	77.228	ENSEBUG00000006783	polr3f	97	77.228	Eptatretus_burgeri
ENSCSAG00000011513	POLR3F	100	99.684	ENSEASG00005002022	POLR3F	100	99.684	Equus_asinus_asinus
ENSCSAG00000011513	POLR3F	100	99.684	ENSECAG00000009920	POLR3F	100	99.684	Equus_caballus
ENSCSAG00000011513	POLR3F	80	92.000	ENSEEUG00000000184	POLR3F	80	92.000	Erinaceus_europaeus
ENSCSAG00000011513	POLR3F	100	88.924	ENSELUG00000001558	polr3f	100	88.924	Esox_lucius
ENSCSAG00000011513	POLR3F	100	99.367	ENSFCAG00000013828	POLR3F	100	99.367	Felis_catus
ENSCSAG00000011513	POLR3F	87	96.000	ENSFALG00000007623	POLR3F	100	96.000	Ficedula_albicollis
ENSCSAG00000011513	POLR3F	100	99.051	ENSFDAG00000002528	POLR3F	100	99.051	Fukomys_damarensis
ENSCSAG00000011513	POLR3F	100	82.911	ENSFHEG00000006450	polr3f	100	82.911	Fundulus_heteroclitus
ENSCSAG00000011513	POLR3F	100	94.304	ENSGALG00000008749	POLR3F	100	94.304	Gallus_gallus
ENSCSAG00000011513	POLR3F	100	84.494	ENSGAFG00000003698	polr3f	100	84.494	Gambusia_affinis
ENSCSAG00000011513	POLR3F	100	93.038	ENSGAGG00000006151	POLR3F	100	93.038	Gopherus_agassizii
ENSCSAG00000011513	POLR3F	100	99.684	ENSGGOG00000011543	POLR3F	100	99.684	Gorilla_gorilla
ENSCSAG00000011513	POLR3F	100	87.025	ENSHBUG00000013806	polr3f	100	87.025	Haplochromis_burtoni
ENSCSAG00000011513	POLR3F	100	98.734	ENSHGLG00000011867	POLR3F	100	98.734	Heterocephalus_glaber_female
ENSCSAG00000011513	POLR3F	100	98.734	ENSHGLG00100012577	POLR3F	100	98.734	Heterocephalus_glaber_male
ENSCSAG00000011513	POLR3F	100	76.899	ENSHCOG00000011751	polr3f	100	76.899	Hippocampus_comes
ENSCSAG00000011513	POLR3F	98	87.460	ENSIPUG00000013347	polr3f	99	87.460	Ictalurus_punctatus
ENSCSAG00000011513	POLR3F	100	99.367	ENSSTOG00000013588	POLR3F	100	99.367	Ictidomys_tridecemlineatus
ENSCSAG00000011513	POLR3F	100	98.734	ENSJJAG00000017513	Polr3f	100	98.734	Jaculus_jaculus
ENSCSAG00000011513	POLR3F	87	81.455	ENSKMAG00000016495	polr3f	100	81.455	Kryptolebias_marmoratus
ENSCSAG00000011513	POLR3F	73	91.810	ENSLBEG00000011998	polr3f	100	91.810	Labrus_bergylta
ENSCSAG00000011513	POLR3F	100	89.557	ENSLACG00000009371	POLR3F	100	89.557	Latimeria_chalumnae
ENSCSAG00000011513	POLR3F	100	89.873	ENSLOCG00000015701	polr3f	100	89.873	Lepisosteus_oculatus
ENSCSAG00000011513	POLR3F	100	99.367	ENSLAFG00000004929	POLR3F	100	99.367	Loxodonta_africana
ENSCSAG00000011513	POLR3F	100	100.000	ENSMFAG00000002227	POLR3F	100	100.000	Macaca_fascicularis
ENSCSAG00000011513	POLR3F	87	100.000	ENSMMUG00000004143	POLR3F	100	100.000	Macaca_mulatta
ENSCSAG00000011513	POLR3F	100	100.000	ENSMNEG00000033404	POLR3F	100	100.000	Macaca_nemestrina
ENSCSAG00000011513	POLR3F	100	100.000	ENSMLEG00000021905	POLR3F	100	100.000	Mandrillus_leucophaeus
ENSCSAG00000011513	POLR3F	100	86.076	ENSMAMG00000017975	polr3f	100	86.076	Mastacembelus_armatus
ENSCSAG00000011513	POLR3F	100	87.025	ENSMZEG00005015134	polr3f	100	87.025	Maylandia_zebra
ENSCSAG00000011513	POLR3F	100	93.987	ENSMGAG00000006691	POLR3F	100	93.987	Meleagris_gallopavo
ENSCSAG00000011513	POLR3F	100	98.734	ENSMAUG00000020176	Polr3f	100	98.734	Mesocricetus_auratus
ENSCSAG00000011513	POLR3F	100	99.367	ENSMICG00000044519	POLR3F	100	99.367	Microcebus_murinus
ENSCSAG00000011513	POLR3F	100	98.418	ENSMOCG00000018352	Polr3f	100	98.418	Microtus_ochrogaster
ENSCSAG00000011513	POLR3F	93	87.879	ENSMMOG00000018477	polr3f	100	87.879	Mola_mola
ENSCSAG00000011513	POLR3F	100	98.418	ENSMODG00000005624	POLR3F	100	98.418	Monodelphis_domestica
ENSCSAG00000011513	POLR3F	100	87.025	ENSMALG00000006685	polr3f	100	87.025	Monopterus_albus
ENSCSAG00000011513	POLR3F	100	98.418	MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	Mus_caroli
ENSCSAG00000011513	POLR3F	100	98.418	ENSMUSG00000027427	Polr3f	100	98.418	Mus_musculus
ENSCSAG00000011513	POLR3F	100	98.418	MGP_PahariEiJ_G0025829	Polr3f	100	98.418	Mus_pahari
ENSCSAG00000011513	POLR3F	100	98.418	MGP_SPRETEiJ_G0025304	Polr3f	100	98.418	Mus_spretus
ENSCSAG00000011513	POLR3F	100	77.231	ENSMPUG00000001252	-	100	77.231	Mustela_putorius_furo
ENSCSAG00000011513	POLR3F	100	99.051	ENSMLUG00000014844	POLR3F	100	99.051	Myotis_lucifugus
ENSCSAG00000011513	POLR3F	100	98.734	ENSNGAG00000010898	Polr3f	100	98.734	Nannospalax_galili
ENSCSAG00000011513	POLR3F	100	87.342	ENSNBRG00000020796	polr3f	100	87.342	Neolamprologus_brichardi
ENSCSAG00000011513	POLR3F	100	99.684	ENSNLEG00000009778	POLR3F	100	99.684	Nomascus_leucogenys
ENSCSAG00000011513	POLR3F	93	92.203	ENSMEUG00000010320	POLR3F	100	92.203	Notamacropus_eugenii
ENSCSAG00000011513	POLR3F	100	97.152	ENSOPRG00000003385	POLR3F	100	97.152	Ochotona_princeps
ENSCSAG00000011513	POLR3F	100	99.051	ENSODEG00000011521	POLR3F	100	99.051	Octodon_degus
ENSCSAG00000011513	POLR3F	100	85.759	ENSONIG00000006858	polr3f	100	85.759	Oreochromis_niloticus
ENSCSAG00000011513	POLR3F	100	96.519	ENSOANG00000001253	POLR3F	100	96.519	Ornithorhynchus_anatinus
ENSCSAG00000011513	POLR3F	100	99.684	ENSOCUG00000015067	POLR3F	100	99.684	Oryctolagus_cuniculus
ENSCSAG00000011513	POLR3F	100	84.810	ENSORLG00000022412	polr3f	100	84.810	Oryzias_latipes
ENSCSAG00000011513	POLR3F	100	84.810	ENSORLG00020021944	polr3f	100	84.810	Oryzias_latipes_hni
ENSCSAG00000011513	POLR3F	100	97.785	ENSOGAG00000002916	POLR3F	100	97.785	Otolemur_garnettii
ENSCSAG00000011513	POLR3F	100	99.684	ENSOARG00000000315	-	100	99.684	Ovis_aries
ENSCSAG00000011513	POLR3F	100	63.291	ENSOARG00000008647	-	100	63.291	Ovis_aries
ENSCSAG00000011513	POLR3F	100	99.684	ENSPPAG00000036681	POLR3F	100	99.684	Pan_paniscus
ENSCSAG00000011513	POLR3F	100	99.367	ENSPPRG00000024604	POLR3F	100	99.367	Panthera_pardus
ENSCSAG00000011513	POLR3F	100	99.367	ENSPTIG00000020292	POLR3F	100	99.367	Panthera_tigris_altaica
ENSCSAG00000011513	POLR3F	100	99.684	ENSPTRG00000013287	POLR3F	100	99.684	Pan_troglodytes
ENSCSAG00000011513	POLR3F	100	100.000	ENSPANG00000025015	POLR3F	100	100.000	Papio_anubis
ENSCSAG00000011513	POLR3F	100	87.975	ENSPKIG00000004427	polr3f	100	87.975	Paramormyrops_kingsleyae
ENSCSAG00000011513	POLR3F	87	95.273	ENSPSIG00000016613	POLR3F	100	95.273	Pelodiscus_sinensis
ENSCSAG00000011513	POLR3F	100	54.232	ENSPMGG00000018350	polr3f	100	56.329	Periophthalmus_magnuspinnatus
ENSCSAG00000011513	POLR3F	100	98.734	ENSPEMG00000006966	Polr3f	100	98.734	Peromyscus_maniculatus_bairdii
ENSCSAG00000011513	POLR3F	100	79.747	ENSPMAG00000005530	polr3f	100	79.747	Petromyzon_marinus
ENSCSAG00000011513	POLR3F	100	98.734	ENSPCIG00000000908	POLR3F	85	98.734	Phascolarctos_cinereus
ENSCSAG00000011513	POLR3F	100	84.494	ENSPFOG00000018334	polr3f	100	84.494	Poecilia_formosa
ENSCSAG00000011513	POLR3F	100	84.494	ENSPLAG00000021803	polr3f	100	84.494	Poecilia_latipinna
ENSCSAG00000011513	POLR3F	100	84.494	ENSPMEG00000013150	polr3f	100	84.494	Poecilia_mexicana
ENSCSAG00000011513	POLR3F	100	84.494	ENSPREG00000005278	polr3f	100	84.494	Poecilia_reticulata
ENSCSAG00000011513	POLR3F	100	99.684	ENSPPYG00000010737	POLR3F	100	99.684	Pongo_abelii
ENSCSAG00000011513	POLR3F	66	99.324	ENSPCAG00000004893	POLR3F	71	99.324	Procavia_capensis
ENSCSAG00000011513	POLR3F	100	99.367	ENSPCOG00000004543	POLR3F	100	99.367	Propithecus_coquereli
ENSCSAG00000011513	POLR3F	100	99.051	ENSPVAG00000000403	POLR3F	100	99.051	Pteropus_vampyrus
ENSCSAG00000011513	POLR3F	100	87.025	ENSPNYG00000016276	polr3f	100	87.025	Pundamilia_nyererei
ENSCSAG00000011513	POLR3F	100	87.975	ENSPNAG00000005164	polr3f	100	87.975	Pygocentrus_nattereri
ENSCSAG00000011513	POLR3F	100	98.734	ENSRNOG00000007548	Polr3f	85	98.734	Rattus_norvegicus
ENSCSAG00000011513	POLR3F	100	100.000	ENSRBIG00000021268	POLR3F	100	100.000	Rhinopithecus_bieti
ENSCSAG00000011513	POLR3F	100	100.000	ENSRROG00000039911	POLR3F	100	100.000	Rhinopithecus_roxellana
ENSCSAG00000011513	POLR3F	100	99.367	ENSSBOG00000018207	POLR3F	100	99.367	Saimiri_boliviensis_boliviensis
ENSCSAG00000011513	POLR3F	100	77.918	ENSSHAG00000018160	POLR3F	100	76.972	Sarcophilus_harrisii
ENSCSAG00000011513	POLR3F	100	89.241	ENSSFOG00015022433	polr3f	100	89.241	Scleropages_formosus
ENSCSAG00000011513	POLR3F	100	85.443	ENSSMAG00000021029	polr3f	100	85.443	Scophthalmus_maximus
ENSCSAG00000011513	POLR3F	100	76.899	ENSSDUG00000022435	polr3f	100	76.899	Seriola_dumerili
ENSCSAG00000011513	POLR3F	100	86.709	ENSSLDG00000012761	polr3f	100	86.709	Seriola_lalandi_dorsalis
ENSCSAG00000011513	POLR3F	100	89.241	ENSSARG00000006039	POLR3F	100	89.241	Sorex_araneus
ENSCSAG00000011513	POLR3F	100	93.671	ENSSPUG00000001873	POLR3F	100	93.671	Sphenodon_punctatus
ENSCSAG00000011513	POLR3F	100	78.481	ENSSPAG00000002092	polr3f	100	78.481	Stegastes_partitus
ENSCSAG00000011513	POLR3F	100	98.734	ENSSSCG00000007095	POLR3F	100	98.734	Sus_scrofa
ENSCSAG00000011513	POLR3F	100	93.671	ENSTGUG00000005839	POLR3F	100	93.671	Taeniopygia_guttata
ENSCSAG00000011513	POLR3F	100	84.810	ENSTRUG00000012101	polr3f	100	84.810	Takifugu_rubripes
ENSCSAG00000011513	POLR3F	100	83.544	ENSTNIG00000006456	polr3f	100	83.544	Tetraodon_nigroviridis
ENSCSAG00000011513	POLR3F	100	83.228	ENSTBEG00000007921	POLR3F	100	83.228	Tupaia_belangeri
ENSCSAG00000011513	POLR3F	100	99.051	ENSTTRG00000002580	POLR3F	100	99.051	Tursiops_truncatus
ENSCSAG00000011513	POLR3F	53	98.193	ENSUAMG00000024166	POLR3F	100	98.193	Ursus_americanus
ENSCSAG00000011513	POLR3F	100	99.051	ENSUMAG00000024944	POLR3F	100	99.051	Ursus_maritimus
ENSCSAG00000011513	POLR3F	100	98.418	ENSVPAG00000009063	POLR3F	100	98.418	Vicugna_pacos
ENSCSAG00000011513	POLR3F	100	99.051	ENSVVUG00000012925	POLR3F	100	99.051	Vulpes_vulpes
ENSCSAG00000011513	POLR3F	100	88.924	ENSXETG00000024898	polr3f	100	88.924	Xenopus_tropicalis
ENSCSAG00000011513	POLR3F	87	86.909	ENSXCOG00000010301	polr3f	100	86.909	Xiphophorus_couchianus
ENSCSAG00000011513	POLR3F	100	84.810	ENSXMAG00000004604	polr3f	100	84.810	Xiphophorus_maculatus