EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000011736 (Gene tree)
Gene ID: 103229396
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 11993 bases
Position: chr24:54966605-54978597
Accession: 103229396
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000007939	RRM_1	PF00076.22	5.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000009828	SLIRP-201	3198	-	ENSCSAP00000007939	109 (aa)	XP_007985606	A0A0D9RH50

Gene Model

Click here to download ENSCSAG00000011736's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000011736's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000011736	SLIRP	72	34.211	ENSCSAG00000002265	MSI1	53	34.211
ENSCSAG00000011736	SLIRP	82	35.385	ENSCSAG00000002626	-	52	35.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000011736	SLIRP	87	81.053	ENSG00000119705	SLIRP	99	84.000	Homo_sapiens
ENSCSAG00000011736	SLIRP	68	56.757	ENSAPOG00000001298	slirp	71	59.155	Acanthochromis_polyacanthus
ENSCSAG00000011736	SLIRP	83	80.220	ENSAMEG00000003975	SLIRP	88	78.750	Ailuropoda_melanoleuca
ENSCSAG00000011736	SLIRP	68	58.108	ENSACIG00000023083	slirp	73	58.108	Amphilophus_citrinellus
ENSCSAG00000011736	SLIRP	81	48.864	ENSAOCG00000006342	slirp	89	48.864	Amphiprion_ocellaris
ENSCSAG00000011736	SLIRP	81	48.864	ENSAPEG00000015917	slirp	89	48.864	Amphiprion_percula
ENSCSAG00000011736	SLIRP	81	48.864	ENSAPEG00000015719	-	90	48.864	Amphiprion_percula
ENSCSAG00000011736	SLIRP	68	58.108	ENSATEG00000013525	slirp	74	58.108	Anabas_testudineus
ENSCSAG00000011736	SLIRP	80	51.724	ENSAMXG00000018693	slirp	87	51.724	Astyanax_mexicanus
ENSCSAG00000011736	SLIRP	100	84.404	ENSCJAG00000016946	SLIRP	90	85.714	Callithrix_jacchus
ENSCSAG00000011736	SLIRP	100	73.874	ENSCAFG00020015876	-	90	73.000	Canis_lupus_dingo
ENSCSAG00000011736	SLIRP	100	81.651	ENSCCAG00000030130	SLIRP	90	82.653	Cebus_capucinus
ENSCSAG00000011736	SLIRP	100	97.248	ENSCATG00000036327	SLIRP	100	97.248	Cercocebus_atys
ENSCSAG00000011736	SLIRP	64	58.571	ENSCPBG00000026327	SLIRP	71	58.571	Chrysemys_picta_bellii
ENSCSAG00000011736	SLIRP	69	94.667	ENSCANG00000032892	SLIRP	91	94.382	Colobus_angolensis_palliatus
ENSCSAG00000011736	SLIRP	100	65.766	ENSCGRG00001024068	Slirp	83	70.652	Cricetulus_griseus_chok1gshd
ENSCSAG00000011736	SLIRP	100	65.766	ENSCGRG00000017440	Slirp	83	70.652	Cricetulus_griseus_crigri
ENSCSAG00000011736	SLIRP	99	44.444	ENSCSEG00000015766	slirp	89	47.126	Cynoglossus_semilaevis
ENSCSAG00000011736	SLIRP	63	65.217	ENSCVAG00000012504	slirp	68	65.217	Cyprinodon_variegatus
ENSCSAG00000011736	SLIRP	69	60.000	ENSDARG00000097753	slirp	72	60.811	Danio_rerio
ENSCSAG00000011736	SLIRP	82	67.778	ENSDNOG00000007721	SLIRP	90	63.636	Dasypus_novemcinctus
ENSCSAG00000011736	SLIRP	100	68.468	ENSDORG00000012379	Slirp	90	69.000	Dipodomys_ordii
ENSCSAG00000011736	SLIRP	90	68.367	ENSETEG00000010345	SLIRP	100	69.725	Echinops_telfairi
ENSCSAG00000011736	SLIRP	100	78.378	ENSEASG00005020193	SLIRP	90	77.000	Equus_asinus_asinus
ENSCSAG00000011736	SLIRP	96	55.660	ENSEEUG00000007257	SLIRP	90	59.341	Erinaceus_europaeus
ENSCSAG00000011736	SLIRP	65	59.155	ENSELUG00000016800	slirp	70	59.155	Esox_lucius
ENSCSAG00000011736	SLIRP	82	79.775	ENSFCAG00000036326	SLIRP	80	79.487	Felis_catus
ENSCSAG00000011736	SLIRP	65	53.521	ENSFALG00000012583	SLIRP	69	53.425	Ficedula_albicollis
ENSCSAG00000011736	SLIRP	99	61.947	ENSFDAG00000008347	SLIRP	86	61.856	Fukomys_damarensis
ENSCSAG00000011736	SLIRP	60	60.000	ENSFHEG00000004709	slirp	71	60.000	Fundulus_heteroclitus
ENSCSAG00000011736	SLIRP	80	49.425	ENSGMOG00000016948	slirp	83	49.425	Gadus_morhua
ENSCSAG00000011736	SLIRP	78	50.588	ENSGALG00000031238	SLIRP	71	58.209	Gallus_gallus
ENSCSAG00000011736	SLIRP	82	55.056	ENSGAFG00000010998	slirp	89	55.056	Gambusia_affinis
ENSCSAG00000011736	SLIRP	72	52.381	ENSGACG00000020137	slirp	98	52.381	Gasterosteus_aculeatus
ENSCSAG00000011736	SLIRP	81	56.667	ENSGAGG00000009953	SLIRP	62	56.667	Gopherus_agassizii
ENSCSAG00000011736	SLIRP	87	81.053	ENSGGOG00000011059	-	100	82.569	Gorilla_gorilla
ENSCSAG00000011736	SLIRP	100	63.063	ENSHGLG00000018491	SLIRP	90	62.000	Heterocephalus_glaber_female
ENSCSAG00000011736	SLIRP	100	63.063	ENSHGLG00100014153	SLIRP	90	62.000	Heterocephalus_glaber_male
ENSCSAG00000011736	SLIRP	81	56.180	ENSHCOG00000006795	slirp	89	56.818	Hippocampus_comes
ENSCSAG00000011736	SLIRP	80	51.724	ENSIPUG00000010214	SLIRP	87	51.724	Ictalurus_punctatus
ENSCSAG00000011736	SLIRP	90	71.000	ENSSTOG00000034316	SLIRP	90	71.000	Ictidomys_tridecemlineatus
ENSCSAG00000011736	SLIRP	81	45.455	ENSKMAG00000002038	slirp	85	45.455	Kryptolebias_marmoratus
ENSCSAG00000011736	SLIRP	81	50.000	ENSLBEG00000007564	slirp	88	50.000	Labrus_bergylta
ENSCSAG00000011736	SLIRP	82	54.444	ENSLACG00000013434	SLIRP	86	55.056	Latimeria_chalumnae
ENSCSAG00000011736	SLIRP	100	98.165	ENSMFAG00000042960	SLIRP	100	98.165	Macaca_fascicularis
ENSCSAG00000011736	SLIRP	100	97.248	ENSMMUG00000029256	SLIRP	100	97.248	Macaca_mulatta
ENSCSAG00000011736	SLIRP	100	98.165	ENSMNEG00000028921	SLIRP	100	98.165	Macaca_nemestrina
ENSCSAG00000011736	SLIRP	81	98.864	ENSMLEG00000043644	SLIRP	91	97.753	Mandrillus_leucophaeus
ENSCSAG00000011736	SLIRP	80	57.303	ENSMZEG00005004617	slirp	90	57.303	Maylandia_zebra
ENSCSAG00000011736	SLIRP	100	69.369	ENSMAUG00000003857	Slirp	90	70.000	Mesocricetus_auratus
ENSCSAG00000011736	SLIRP	100	70.536	ENSMICG00000012080	SLIRP	90	71.287	Microcebus_murinus
ENSCSAG00000011736	SLIRP	96	72.222	ENSMOCG00000016019	Slirp	96	72.222	Microtus_ochrogaster
ENSCSAG00000011736	SLIRP	68	55.405	ENSMMOG00000018268	slirp	74	55.405	Mola_mola
ENSCSAG00000011736	SLIRP	65	59.155	ENSMODG00000005207	-	100	59.155	Monodelphis_domestica
ENSCSAG00000011736	SLIRP	92	48.000	ENSMALG00000012581	slirp	89	51.724	Monopterus_albus
ENSCSAG00000011736	SLIRP	96	73.148	MGP_CAROLIEiJ_G0017995	Slirp	90	74.227	Mus_caroli
ENSCSAG00000011736	SLIRP	96	74.074	ENSMUSG00000021040	Slirp	87	75.258	Mus_musculus
ENSCSAG00000011736	SLIRP	96	74.074	MGP_SPRETEiJ_G0018840	Slirp	87	75.258	Mus_spretus
ENSCSAG00000011736	SLIRP	84	71.277	ENSMLUG00000024998	-	100	70.270	Myotis_lucifugus
ENSCSAG00000011736	SLIRP	90	69.000	ENSMLUG00000029544	-	100	69.369	Myotis_lucifugus
ENSCSAG00000011736	SLIRP	96	68.519	ENSNGAG00000016363	Slirp	87	74.444	Nannospalax_galili
ENSCSAG00000011736	SLIRP	100	82.569	ENSNLEG00000032459	-	90	81.633	Nomascus_leucogenys
ENSCSAG00000011736	SLIRP	93	79.208	ENSNLEG00000027238	-	94	79.592	Nomascus_leucogenys
ENSCSAG00000011736	SLIRP	96	75.926	ENSODEG00000012580	SLIRP	88	79.012	Octodon_degus
ENSCSAG00000011736	SLIRP	65	61.972	ENSONIG00000011692	slirp	89	51.136	Oreochromis_niloticus
ENSCSAG00000011736	SLIRP	87	57.895	ENSOANG00000022366	SLIRP	69	67.532	Ornithorhynchus_anatinus
ENSCSAG00000011736	SLIRP	80	53.933	ENSORLG00000010761	slirp	69	53.933	Oryzias_latipes
ENSCSAG00000011736	SLIRP	68	58.108	ENSORLG00020022188	slirp	74	58.108	Oryzias_latipes_hni
ENSCSAG00000011736	SLIRP	87	49.474	ENSORLG00015020171	slirp	88	53.933	Oryzias_latipes_hsok
ENSCSAG00000011736	SLIRP	80	55.056	ENSOMEG00000019321	slirp	89	55.056	Oryzias_melastigma
ENSCSAG00000011736	SLIRP	87	80.000	ENSPPAG00000040710	-	100	81.651	Pan_paniscus
ENSCSAG00000011736	SLIRP	82	79.775	ENSPPRG00000014350	SLIRP	80	79.487	Panthera_pardus
ENSCSAG00000011736	SLIRP	82	79.775	ENSPTIG00000014196	SLIRP	80	79.487	Panthera_tigris_altaica
ENSCSAG00000011736	SLIRP	84	80.435	ENSPTRG00000030691	SLIRP	100	82.075	Pan_troglodytes
ENSCSAG00000011736	SLIRP	100	97.248	ENSPANG00000026323	SLIRP	100	97.248	Papio_anubis
ENSCSAG00000011736	SLIRP	62	54.412	ENSPKIG00000008831	slirp	66	55.224	Paramormyrops_kingsleyae
ENSCSAG00000011736	SLIRP	63	66.667	ENSPMGG00000010541	slirp	79	66.667	Periophthalmus_magnuspinnatus
ENSCSAG00000011736	SLIRP	86	70.408	ENSPEMG00000013234	Slirp	96	68.807	Peromyscus_maniculatus_bairdii
ENSCSAG00000011736	SLIRP	62	48.529	ENSPMAG00000009355	slirp	76	48.529	Petromyzon_marinus
ENSCSAG00000011736	SLIRP	74	56.627	ENSPCIG00000026842	-	74	62.319	Phascolarctos_cinereus
ENSCSAG00000011736	SLIRP	81	53.409	ENSPFOG00000006758	slirp	88	53.409	Poecilia_formosa
ENSCSAG00000011736	SLIRP	81	53.409	ENSPLAG00000011140	slirp	88	53.409	Poecilia_latipinna
ENSCSAG00000011736	SLIRP	81	53.409	ENSPMEG00000019535	slirp	88	53.409	Poecilia_mexicana
ENSCSAG00000011736	SLIRP	68	60.811	ENSPREG00000011673	slirp	74	60.811	Poecilia_reticulata
ENSCSAG00000011736	SLIRP	90	78.571	ENSPPYG00000006030	SLIRP	100	79.817	Pongo_abelii
ENSCSAG00000011736	SLIRP	100	71.429	ENSPCOG00000015159	SLIRP	90	72.277	Propithecus_coquereli
ENSCSAG00000011736	SLIRP	80	59.091	ENSPNAG00000008633	slirp	89	59.091	Pygocentrus_nattereri
ENSCSAG00000011736	SLIRP	87	88.421	ENSRBIG00000035817	-	89	88.421	Rhinopithecus_bieti
ENSCSAG00000011736	SLIRP	81	95.455	ENSRBIG00000032998	-	81	95.455	Rhinopithecus_bieti
ENSCSAG00000011736	SLIRP	100	95.413	ENSRBIG00000032222	-	100	95.413	Rhinopithecus_bieti
ENSCSAG00000011736	SLIRP	83	91.209	ENSRBIG00000031396	-	91	91.209	Rhinopithecus_bieti
ENSCSAG00000011736	SLIRP	90	93.878	ENSRROG00000036656	-	96	95.506	Rhinopithecus_roxellana
ENSCSAG00000011736	SLIRP	81	96.591	ENSRROG00000017133	-	92	96.591	Rhinopithecus_roxellana
ENSCSAG00000011736	SLIRP	81	90.909	ENSRROG00000041312	-	84	90.909	Rhinopithecus_roxellana
ENSCSAG00000011736	SLIRP	73	88.750	ENSRROG00000035604	-	80	88.750	Rhinopithecus_roxellana
ENSCSAG00000011736	SLIRP	82	82.022	ENSSBOG00000020014	SLIRP	84	83.333	Saimiri_boliviensis_boliviensis
ENSCSAG00000011736	SLIRP	71	55.844	ENSSFOG00015011165	slirp	78	55.844	Scleropages_formosus
ENSCSAG00000011736	SLIRP	80	42.857	ENSSMAG00000012930	slirp	89	42.857	Scophthalmus_maximus
ENSCSAG00000011736	SLIRP	68	60.811	ENSSLDG00000023136	slirp	67	60.811	Seriola_lalandi_dorsalis
ENSCSAG00000011736	SLIRP	80	57.955	ENSSPUG00000009346	SLIRP	76	62.162	Sphenodon_punctatus
ENSCSAG00000011736	SLIRP	68	52.703	ENSSPAG00000013477	slirp	74	52.703	Stegastes_partitus
ENSCSAG00000011736	SLIRP	100	72.973	ENSSSCG00000028167	SLIRP	90	73.000	Sus_scrofa
ENSCSAG00000011736	SLIRP	73	53.750	ENSTGUG00000012337	SLIRP	69	56.164	Taeniopygia_guttata
ENSCSAG00000011736	SLIRP	83	46.154	ENSTRUG00000020127	slirp	74	53.333	Takifugu_rubripes
ENSCSAG00000011736	SLIRP	100	75.676	ENSUAMG00000022445	SLIRP	90	74.000	Ursus_americanus
ENSCSAG00000011736	SLIRP	100	76.577	ENSUMAG00000007166	SLIRP	90	75.000	Ursus_maritimus
ENSCSAG00000011736	SLIRP	100	73.394	ENSVPAG00000001781	SLIRP	90	73.469	Vicugna_pacos
ENSCSAG00000011736	SLIRP	86	73.958	ENSVVUG00000004436	SLIRP	100	74.775	Vulpes_vulpes
ENSCSAG00000011736	SLIRP	64	62.857	ENSXETG00000030343	SLIRP	79	62.857	Xenopus_tropicalis
ENSCSAG00000011736	SLIRP	81	53.409	ENSXCOG00000009422	slirp	88	53.409	Xiphophorus_couchianus
ENSCSAG00000011736	SLIRP	81	54.545	ENSXMAG00000015655	slirp	88	54.545	Xiphophorus_maculatus