EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000011823 (Gene tree)
Gene ID: 103230557
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 112012 bases
Position: chr25:55167077-55279088
Accession: 29434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000008017	zf-CCCH	PF00642.24	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000009912	RC3H1-201	4691	-	ENSCSAP00000008017	1285 (aa)	-	A0A0D9RHC8

Gene Model

Click here to download ENSCSAG00000011823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000011823's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000011823	RC3H1	75	49.951	ENSCSAG00000013416	RC3H2	89	50.352

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000011823	RC3H1	85	99.079	ENSG00000135870	RC3H1	96	99.079	Homo_sapiens
ENSCSAG00000011823	RC3H1	85	97.053	ENSAMEG00000015657	RC3H1	96	97.053	Ailuropoda_melanoleuca
ENSCSAG00000011823	RC3H1	84	88.595	ENSAPLG00000005341	RC3H1	96	88.595	Anas_platyrhynchos
ENSCSAG00000011823	RC3H1	84	86.575	ENSACAG00000015271	RC3H1	96	86.575	Anolis_carolinensis
ENSCSAG00000011823	RC3H1	85	99.079	ENSANAG00000036716	RC3H1	96	99.079	Aotus_nancymaae
ENSCSAG00000011823	RC3H1	85	95.948	ENSBTAG00000052708	RC3H1	96	95.948	Bos_taurus
ENSCSAG00000011823	RC3H1	85	98.711	ENSCJAG00000009106	RC3H1	96	98.711	Callithrix_jacchus
ENSCSAG00000011823	RC3H1	85	97.238	ENSCAFG00000014434	RC3H1	96	97.238	Canis_familiaris
ENSCSAG00000011823	RC3H1	85	97.238	ENSCAFG00020017112	RC3H1	99	98.202	Canis_lupus_dingo
ENSCSAG00000011823	RC3H1	85	96.317	ENSCHIG00000002873	RC3H1	96	96.317	Capra_hircus
ENSCSAG00000011823	RC3H1	85	95.676	ENSTSYG00000003913	RC3H1	96	95.676	Carlito_syrichta
ENSCSAG00000011823	RC3H1	85	91.720	ENSCPOG00000004349	RC3H1	96	91.444	Cavia_porcellus
ENSCSAG00000011823	RC3H1	85	96.593	ENSCCAG00000025652	RC3H1	98	98.756	Cebus_capucinus
ENSCSAG00000011823	RC3H1	85	99.540	ENSCATG00000033497	RC3H1	96	99.723	Cercocebus_atys
ENSCSAG00000011823	RC3H1	85	95.216	ENSCLAG00000011267	RC3H1	96	95.216	Chinchilla_lanigera
ENSCSAG00000011823	RC3H1	85	90.119	ENSCPBG00000014670	RC3H1	96	90.119	Chrysemys_picta_bellii
ENSCSAG00000011823	RC3H1	84	99.723	ENSCANG00000032120	RC3H1	96	99.723	Colobus_angolensis_palliatus
ENSCSAG00000011823	RC3H1	85	94.383	ENSCGRG00001020812	Rc3h1	96	93.923	Cricetulus_griseus_chok1gshd
ENSCSAG00000011823	RC3H1	85	94.383	ENSCGRG00000011952	Rc3h1	96	93.923	Cricetulus_griseus_crigri
ENSCSAG00000011823	RC3H1	85	95.764	ENSDORG00000004855	Rc3h1	96	95.764	Dipodomys_ordii
ENSCSAG00000011823	RC3H1	68	96.766	ENSETEG00000012064	RC3H1	83	96.766	Echinops_telfairi
ENSCSAG00000011823	RC3H1	85	96.133	ENSEASG00005017000	RC3H1	96	96.133	Equus_asinus_asinus
ENSCSAG00000011823	RC3H1	85	96.041	ENSECAG00000021208	RC3H1	96	96.041	Equus_caballus
ENSCSAG00000011823	RC3H1	79	83.302	ENSEEUG00000014861	RC3H1	93	83.302	Erinaceus_europaeus
ENSCSAG00000011823	RC3H1	85	97.514	ENSFCAG00000014924	RC3H1	96	97.514	Felis_catus
ENSCSAG00000011823	RC3H1	84	87.934	ENSFALG00000002947	RC3H1	96	87.386	Ficedula_albicollis
ENSCSAG00000011823	RC3H1	85	95.400	ENSFDAG00000013303	RC3H1	96	95.400	Fukomys_damarensis
ENSCSAG00000011823	RC3H1	84	87.615	ENSGALG00000004587	RC3H1	95	87.615	Gallus_gallus
ENSCSAG00000011823	RC3H1	85	88.391	ENSGAGG00000018194	RC3H1	96	88.665	Gopherus_agassizii
ENSCSAG00000011823	RC3H1	82	93.879	ENSGGOG00000005735	RC3H1	95	93.879	Gorilla_gorilla
ENSCSAG00000011823	RC3H1	74	89.202	ENSHGLG00000004183	-	95	89.202	Heterocephalus_glaber_female
ENSCSAG00000011823	RC3H1	85	95.032	ENSHGLG00100008577	RC3H1	96	95.032	Heterocephalus_glaber_male
ENSCSAG00000011823	RC3H1	85	96.412	ENSSTOG00000016033	RC3H1	96	96.412	Ictidomys_tridecemlineatus
ENSCSAG00000011823	RC3H1	85	95.212	ENSJJAG00000018915	Rc3h1	96	94.936	Jaculus_jaculus
ENSCSAG00000011823	RC3H1	84	76.594	ENSLACG00000016186	RC3H1	100	78.594	Latimeria_chalumnae
ENSCSAG00000011823	RC3H1	85	97.514	ENSLAFG00000004367	RC3H1	99	97.514	Loxodonta_africana
ENSCSAG00000011823	RC3H1	85	99.448	ENSMFAG00000033725	RC3H1	96	99.448	Macaca_fascicularis
ENSCSAG00000011823	RC3H1	85	99.355	ENSMMUG00000000630	RC3H1	98	99.538	Macaca_mulatta
ENSCSAG00000011823	RC3H1	85	99.540	ENSMNEG00000035968	RC3H1	96	99.540	Macaca_nemestrina
ENSCSAG00000011823	RC3H1	85	99.448	ENSMLEG00000037455	RC3H1	96	99.448	Mandrillus_leucophaeus
ENSCSAG00000011823	RC3H1	77	94.456	ENSMAUG00000020864	Rc3h1	93	93.952	Mesocricetus_auratus
ENSCSAG00000011823	RC3H1	85	97.606	ENSMICG00000003000	RC3H1	96	97.606	Microcebus_murinus
ENSCSAG00000011823	RC3H1	79	92.963	ENSMOCG00000016587	Rc3h1	94	92.567	Microtus_ochrogaster
ENSCSAG00000011823	RC3H1	85	92.548	ENSMODG00000004289	RC3H1	96	92.640	Monodelphis_domestica
ENSCSAG00000011823	RC3H1	85	94.015	MGP_CAROLIEiJ_G0014756	Rc3h1	96	93.554	Mus_caroli
ENSCSAG00000011823	RC3H1	85	93.831	ENSMUSG00000040423	Rc3h1	96	93.370	Mus_musculus
ENSCSAG00000011823	RC3H1	85	93.831	MGP_PahariEiJ_G0027992	Rc3h1	96	93.370	Mus_pahari
ENSCSAG00000011823	RC3H1	85	93.738	MGP_SPRETEiJ_G0015563	Rc3h1	96	93.278	Mus_spretus
ENSCSAG00000011823	RC3H1	85	96.964	ENSMPUG00000004747	RC3H1	96	96.964	Mustela_putorius_furo
ENSCSAG00000011823	RC3H1	85	95.396	ENSMLUG00000011127	RC3H1	96	95.396	Myotis_lucifugus
ENSCSAG00000011823	RC3H1	85	95.764	ENSNGAG00000011135	Rc3h1	96	95.304	Nannospalax_galili
ENSCSAG00000011823	RC3H1	85	98.987	ENSNLEG00000015327	RC3H1	96	98.987	Nomascus_leucogenys
ENSCSAG00000011823	RC3H1	84	83.210	ENSOPRG00000013068	RC3H1	96	83.303	Ochotona_princeps
ENSCSAG00000011823	RC3H1	85	95.032	ENSODEG00000014185	RC3H1	96	95.032	Octodon_degus
ENSCSAG00000011823	RC3H1	84	91.865	ENSOANG00000000924	RC3H1	96	91.773	Ornithorhynchus_anatinus
ENSCSAG00000011823	RC3H1	85	96.225	ENSOCUG00000004930	RC3H1	96	96.225	Oryctolagus_cuniculus
ENSCSAG00000011823	RC3H1	85	90.074	ENSOGAG00000004044	RC3H1	96	90.074	Otolemur_garnettii
ENSCSAG00000011823	RC3H1	84	97.056	ENSOARG00000013011	RC3H1	95	97.056	Ovis_aries
ENSCSAG00000011823	RC3H1	84	99.354	ENSPPAG00000039253	RC3H1	96	99.354	Pan_paniscus
ENSCSAG00000011823	RC3H1	85	96.777	ENSPPRG00000009007	RC3H1	96	96.777	Panthera_pardus
ENSCSAG00000011823	RC3H1	85	97.159	ENSPTIG00000015326	RC3H1	96	97.159	Panthera_tigris_altaica
ENSCSAG00000011823	RC3H1	84	99.354	ENSPTRG00000001702	RC3H1	96	99.354	Pan_troglodytes
ENSCSAG00000011823	RC3H1	85	99.448	ENSPANG00000008886	RC3H1	96	99.448	Papio_anubis
ENSCSAG00000011823	RC3H1	85	89.122	ENSPSIG00000016181	RC3H1	96	89.397	Pelodiscus_sinensis
ENSCSAG00000011823	RC3H1	85	93.923	ENSPEMG00000011966	Rc3h1	96	93.554	Peromyscus_maniculatus_bairdii
ENSCSAG00000011823	RC3H1	62	94.311	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSCSAG00000011823	RC3H1	83	97.214	ENSPPYG00000000490	RC3H1	98	98.373	Pongo_abelii
ENSCSAG00000011823	RC3H1	68	100.000	ENSPCAG00000010775	RC3H1	82	100.000	Procavia_capensis
ENSCSAG00000011823	RC3H1	69	96.963	ENSPCOG00000021795	RC3H1	91	96.963	Propithecus_coquereli
ENSCSAG00000011823	RC3H1	85	88.029	ENSPVAG00000007593	RC3H1	96	88.029	Pteropus_vampyrus
ENSCSAG00000011823	RC3H1	83	62.865	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSCSAG00000011823	RC3H1	84	99.723	ENSRBIG00000037743	RC3H1	96	99.723	Rhinopithecus_bieti
ENSCSAG00000011823	RC3H1	85	99.355	ENSRROG00000036546	RC3H1	96	99.355	Rhinopithecus_roxellana
ENSCSAG00000011823	RC3H1	77	92.727	ENSSBOG00000010664	RC3H1	95	97.403	Saimiri_boliviensis_boliviensis
ENSCSAG00000011823	RC3H1	84	91.697	ENSSHAG00000007589	RC3H1	96	91.790	Sarcophilus_harrisii
ENSCSAG00000011823	RC3H1	73	86.712	ENSSARG00000004660	RC3H1	82	86.712	Sorex_araneus
ENSCSAG00000011823	RC3H1	85	84.749	ENSSPUG00000018472	RC3H1	96	84.186	Sphenodon_punctatus
ENSCSAG00000011823	RC3H1	85	97.330	ENSSSCG00000015498	RC3H1	96	97.330	Sus_scrofa
ENSCSAG00000011823	RC3H1	85	87.923	ENSTGUG00000004090	RC3H1	96	87.923	Taeniopygia_guttata
ENSCSAG00000011823	RC3H1	74	97.561	ENSTBEG00000005015	RC3H1	84	97.561	Tupaia_belangeri
ENSCSAG00000011823	RC3H1	85	97.059	ENSTTRG00000008572	RC3H1	96	97.059	Tursiops_truncatus
ENSCSAG00000011823	RC3H1	85	96.501	ENSUAMG00000019525	RC3H1	96	96.501	Ursus_americanus
ENSCSAG00000011823	RC3H1	84	97.322	ENSUMAG00000020087	RC3H1	95	97.322	Ursus_maritimus
ENSCSAG00000011823	RC3H1	77	98.649	ENSVPAG00000002591	RC3H1	88	98.649	Vicugna_pacos
ENSCSAG00000011823	RC3H1	85	96.881	ENSVVUG00000014201	RC3H1	96	96.881	Vulpes_vulpes
ENSCSAG00000011823	RC3H1	84	79.781	ENSXETG00000020030	rc3h1	96	79.307	Xenopus_tropicalis