EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000012121 (Gene tree)
Gene ID: 103225669
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 3540 bases
Position: chr5:704519-708058
Accession: 103225669
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000008307	PseudoU_synth_2	PF00849.22	1.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000010211	RPUSD1-201	2191	XM_007980699	ENSCSAP00000008307	312 (aa)	XP_007978890	A0A0D9RI68

Gene Model

Click here to download ENSCSAG00000012121's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000012121's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000012121	RPUSD1	100	96.474	ENSG00000007376	RPUSD1	100	96.474	Homo_sapiens
ENSCSAG00000012121	RPUSD1	98	56.393	ENSAPOG00000022221	rpusd1	98	55.519	Acanthochromis_polyacanthus
ENSCSAG00000012121	RPUSD1	100	80.449	ENSAMEG00000007461	RPUSD1	100	80.449	Ailuropoda_melanoleuca
ENSCSAG00000012121	RPUSD1	98	57.190	ENSACIG00000015863	rpusd1	98	57.468	Amphilophus_citrinellus
ENSCSAG00000012121	RPUSD1	98	55.738	ENSAOCG00000021975	rpusd1	95	55.738	Amphiprion_ocellaris
ENSCSAG00000012121	RPUSD1	98	55.410	ENSAPEG00000001316	rpusd1	95	55.410	Amphiprion_percula
ENSCSAG00000012121	RPUSD1	81	64.822	ENSATEG00000002984	rpusd1	81	64.822	Anabas_testudineus
ENSCSAG00000012121	RPUSD1	79	58.300	ENSAPLG00000012316	RPUSD1	99	58.300	Anas_platyrhynchos
ENSCSAG00000012121	RPUSD1	99	65.484	ENSACAG00000008953	RPUSD1	100	64.968	Anolis_carolinensis
ENSCSAG00000012121	RPUSD1	100	93.910	ENSANAG00000024709	RPUSD1	100	93.910	Aotus_nancymaae
ENSCSAG00000012121	RPUSD1	98	58.252	ENSACLG00000013692	rpusd1	98	57.929	Astatotilapia_calliptera
ENSCSAG00000012121	RPUSD1	99	57.605	ENSAMXG00000019802	rpusd1	100	57.643	Astyanax_mexicanus
ENSCSAG00000012121	RPUSD1	100	86.538	ENSBTAG00000000179	RPUSD1	100	86.538	Bos_taurus
ENSCSAG00000012121	RPUSD1	100	93.590	ENSCJAG00000012253	RPUSD1	100	93.590	Callithrix_jacchus
ENSCSAG00000012121	RPUSD1	99	82.315	ENSCAFG00000019614	RPUSD1	99	82.958	Canis_familiaris
ENSCSAG00000012121	RPUSD1	99	82.315	ENSCAFG00020008891	RPUSD1	99	82.958	Canis_lupus_dingo
ENSCSAG00000012121	RPUSD1	100	85.256	ENSCHIG00000012872	RPUSD1	100	85.256	Capra_hircus
ENSCSAG00000012121	RPUSD1	99	85.852	ENSTSYG00000036934	RPUSD1	99	85.531	Carlito_syrichta
ENSCSAG00000012121	RPUSD1	100	83.333	ENSCAPG00000014219	RPUSD1	100	82.692	Cavia_aperea
ENSCSAG00000012121	RPUSD1	100	83.333	ENSCPOG00000034604	RPUSD1	100	82.692	Cavia_porcellus
ENSCSAG00000012121	RPUSD1	100	94.231	ENSCCAG00000034385	RPUSD1	100	94.231	Cebus_capucinus
ENSCSAG00000012121	RPUSD1	100	99.038	ENSCATG00000042983	RPUSD1	100	99.038	Cercocebus_atys
ENSCSAG00000012121	RPUSD1	100	83.333	ENSCLAG00000013966	RPUSD1	100	83.654	Chinchilla_lanigera
ENSCSAG00000012121	RPUSD1	99	65.696	ENSCPBG00000021101	RPUSD1	99	65.696	Chrysemys_picta_bellii
ENSCSAG00000012121	RPUSD1	90	98.932	ENSCANG00000028576	RPUSD1	100	98.932	Colobus_angolensis_palliatus
ENSCSAG00000012121	RPUSD1	100	81.731	ENSCGRG00001014253	Rpusd1	100	80.449	Cricetulus_griseus_chok1gshd
ENSCSAG00000012121	RPUSD1	100	81.731	ENSCGRG00000017995	Rpusd1	100	80.449	Cricetulus_griseus_crigri
ENSCSAG00000012121	RPUSD1	99	55.340	ENSCSEG00000018512	rpusd1	100	55.340	Cynoglossus_semilaevis
ENSCSAG00000012121	RPUSD1	98	56.026	ENSCVAG00000022746	rpusd1	98	54.902	Cyprinodon_variegatus
ENSCSAG00000012121	RPUSD1	99	58.576	ENSDARG00000060192	rpusd1	100	58.654	Danio_rerio
ENSCSAG00000012121	RPUSD1	100	84.295	ENSDNOG00000003721	RPUSD1	100	84.295	Dasypus_novemcinctus
ENSCSAG00000012121	RPUSD1	100	84.295	ENSDORG00000026656	Rpusd1	100	84.615	Dipodomys_ordii
ENSCSAG00000012121	RPUSD1	99	46.769	ENSEBUG00000008767	rpusd1	94	46.462	Eptatretus_burgeri
ENSCSAG00000012121	RPUSD1	99	85.079	ENSEASG00005018421	RPUSD1	75	86.667	Equus_asinus_asinus
ENSCSAG00000012121	RPUSD1	98	53.074	ENSELUG00000014307	rpusd1	88	53.074	Esox_lucius
ENSCSAG00000012121	RPUSD1	100	80.449	ENSFCAG00000010359	RPUSD1	100	80.449	Felis_catus
ENSCSAG00000012121	RPUSD1	99	64.078	ENSFALG00000003211	RPUSD1	100	64.078	Ficedula_albicollis
ENSCSAG00000012121	RPUSD1	100	84.295	ENSFDAG00000013398	RPUSD1	100	83.333	Fukomys_damarensis
ENSCSAG00000012121	RPUSD1	98	54.426	ENSFHEG00000004736	rpusd1	98	55.082	Fundulus_heteroclitus
ENSCSAG00000012121	RPUSD1	98	56.066	ENSGMOG00000010756	rpusd1	98	56.066	Gadus_morhua
ENSCSAG00000012121	RPUSD1	99	63.430	ENSGALG00000005315	RPUSD1	100	63.430	Gallus_gallus
ENSCSAG00000012121	RPUSD1	98	56.393	ENSGAFG00000009886	rpusd1	98	56.393	Gambusia_affinis
ENSCSAG00000012121	RPUSD1	80	64.542	ENSGACG00000014276	rpusd1	97	56.106	Gasterosteus_aculeatus
ENSCSAG00000012121	RPUSD1	99	65.049	ENSGAGG00000004181	RPUSD1	99	65.049	Gopherus_agassizii
ENSCSAG00000012121	RPUSD1	100	96.154	ENSGGOG00000013997	RPUSD1	100	96.154	Gorilla_gorilla
ENSCSAG00000012121	RPUSD1	98	57.929	ENSHBUG00000023728	rpusd1	98	57.605	Haplochromis_burtoni
ENSCSAG00000012121	RPUSD1	100	82.692	ENSHGLG00000002595	RPUSD1	100	83.013	Heterocephalus_glaber_female
ENSCSAG00000012121	RPUSD1	100	82.692	ENSHGLG00100014303	RPUSD1	100	83.013	Heterocephalus_glaber_male
ENSCSAG00000012121	RPUSD1	98	58.497	ENSHCOG00000002390	rpusd1	99	58.170	Hippocampus_comes
ENSCSAG00000012121	RPUSD1	99	59.091	ENSIPUG00000001570	rpusd1	99	59.091	Ictalurus_punctatus
ENSCSAG00000012121	RPUSD1	100	87.821	ENSSTOG00000004276	RPUSD1	100	87.179	Ictidomys_tridecemlineatus
ENSCSAG00000012121	RPUSD1	100	84.295	ENSJJAG00000015696	Rpusd1	100	84.615	Jaculus_jaculus
ENSCSAG00000012121	RPUSD1	98	55.700	ENSKMAG00000017287	rpusd1	98	55.410	Kryptolebias_marmoratus
ENSCSAG00000012121	RPUSD1	98	57.049	ENSLBEG00000013354	RPUSD1	98	57.049	Labrus_bergylta
ENSCSAG00000012121	RPUSD1	98	57.049	ENSLBEG00000022502	rpusd1	98	57.049	Labrus_bergylta
ENSCSAG00000012121	RPUSD1	99	61.039	ENSLACG00000008869	RPUSD1	99	61.039	Latimeria_chalumnae
ENSCSAG00000012121	RPUSD1	69	71.759	ENSLOCG00000005682	rpusd1	99	71.759	Lepisosteus_oculatus
ENSCSAG00000012121	RPUSD1	100	82.372	ENSLAFG00000002115	RPUSD1	100	82.372	Loxodonta_africana
ENSCSAG00000012121	RPUSD1	100	99.359	ENSMFAG00000003961	RPUSD1	100	99.359	Macaca_fascicularis
ENSCSAG00000012121	RPUSD1	100	99.359	ENSMMUG00000000842	RPUSD1	100	99.359	Macaca_mulatta
ENSCSAG00000012121	RPUSD1	100	99.359	ENSMNEG00000042712	RPUSD1	100	99.359	Macaca_nemestrina
ENSCSAG00000012121	RPUSD1	100	99.359	ENSMLEG00000030591	RPUSD1	100	99.359	Mandrillus_leucophaeus
ENSCSAG00000012121	RPUSD1	98	56.536	ENSMAMG00000004735	rpusd1	98	56.536	Mastacembelus_armatus
ENSCSAG00000012121	RPUSD1	98	58.252	ENSMZEG00005003214	rpusd1	98	57.929	Maylandia_zebra
ENSCSAG00000012121	RPUSD1	97	62.706	ENSMGAG00000005447	RPUSD1	99	62.583	Meleagris_gallopavo
ENSCSAG00000012121	RPUSD1	84	77.068	ENSMAUG00000019998	Rpusd1	100	77.068	Mesocricetus_auratus
ENSCSAG00000012121	RPUSD1	100	88.462	ENSMICG00000017561	RPUSD1	100	88.462	Microcebus_murinus
ENSCSAG00000012121	RPUSD1	99	83.280	ENSMOCG00000014082	Rpusd1	99	82.958	Microtus_ochrogaster
ENSCSAG00000012121	RPUSD1	79	64.490	ENSMMOG00000012569	rpusd1	99	55.882	Mola_mola
ENSCSAG00000012121	RPUSD1	100	66.456	ENSMODG00000016882	RPUSD1	100	66.456	Monodelphis_domestica
ENSCSAG00000012121	RPUSD1	98	58.117	ENSMALG00000017818	rpusd1	98	57.792	Monopterus_albus
ENSCSAG00000012121	RPUSD1	100	83.013	MGP_CAROLIEiJ_G0021244	Rpusd1	100	82.692	Mus_caroli
ENSCSAG00000012121	RPUSD1	100	83.333	ENSMUSG00000041199	Rpusd1	100	83.013	Mus_musculus
ENSCSAG00000012121	RPUSD1	100	81.210	MGP_PahariEiJ_G0023562	Rpusd1	99	81.994	Mus_pahari
ENSCSAG00000012121	RPUSD1	100	83.333	MGP_SPRETEiJ_G0022155	Rpusd1	100	83.013	Mus_spretus
ENSCSAG00000012121	RPUSD1	100	79.808	ENSMPUG00000015897	RPUSD1	100	79.808	Mustela_putorius_furo
ENSCSAG00000012121	RPUSD1	100	87.179	ENSMLUG00000001089	RPUSD1	100	87.179	Myotis_lucifugus
ENSCSAG00000012121	RPUSD1	100	85.256	ENSNGAG00000003595	Rpusd1	100	84.615	Nannospalax_galili
ENSCSAG00000012121	RPUSD1	98	56.678	ENSNBRG00000006457	rpusd1	98	57.468	Neolamprologus_brichardi
ENSCSAG00000012121	RPUSD1	56	94.286	ENSNLEG00000008424	-	100	94.286	Nomascus_leucogenys
ENSCSAG00000012121	RPUSD1	100	68.910	ENSMEUG00000016049	RPUSD1	100	67.628	Notamacropus_eugenii
ENSCSAG00000012121	RPUSD1	99	76.774	ENSOPRG00000008340	RPUSD1	99	74.286	Ochotona_princeps
ENSCSAG00000012121	RPUSD1	100	82.372	ENSODEG00000016945	RPUSD1	100	82.051	Octodon_degus
ENSCSAG00000012121	RPUSD1	98	57.282	ENSONIG00000015672	rpusd1	99	56.958	Oreochromis_niloticus
ENSCSAG00000012121	RPUSD1	99	57.143	ENSORLG00000013009	rpusd1	99	57.143	Oryzias_latipes
ENSCSAG00000012121	RPUSD1	99	56.818	ENSORLG00020010382	rpusd1	99	56.818	Oryzias_latipes_hni
ENSCSAG00000012121	RPUSD1	99	56.169	ENSORLG00015021354	rpusd1	99	56.169	Oryzias_latipes_hsok
ENSCSAG00000012121	RPUSD1	98	56.393	ENSOMEG00000021426	rpusd1	98	56.393	Oryzias_melastigma
ENSCSAG00000012121	RPUSD1	100	90.064	ENSOGAG00000003795	RPUSD1	100	90.064	Otolemur_garnettii
ENSCSAG00000012121	RPUSD1	100	85.897	ENSOARG00000014254	RPUSD1	100	85.897	Ovis_aries
ENSCSAG00000012121	RPUSD1	100	96.154	ENSPPAG00000034797	RPUSD1	100	96.154	Pan_paniscus
ENSCSAG00000012121	RPUSD1	100	80.769	ENSPPRG00000012389	RPUSD1	100	79.365	Panthera_pardus
ENSCSAG00000012121	RPUSD1	100	80.449	ENSPTIG00000008545	RPUSD1	92	79.048	Panthera_tigris_altaica
ENSCSAG00000012121	RPUSD1	100	96.154	ENSPTRG00000007565	RPUSD1	100	96.154	Pan_troglodytes
ENSCSAG00000012121	RPUSD1	100	98.718	ENSPANG00000024401	RPUSD1	100	98.718	Papio_anubis
ENSCSAG00000012121	RPUSD1	99	59.547	ENSPKIG00000018890	rpusd1	91	59.164	Paramormyrops_kingsleyae
ENSCSAG00000012121	RPUSD1	99	65.696	ENSPSIG00000013945	RPUSD1	100	65.696	Pelodiscus_sinensis
ENSCSAG00000012121	RPUSD1	98	56.721	ENSPMGG00000014950	rpusd1	98	56.721	Periophthalmus_magnuspinnatus
ENSCSAG00000012121	RPUSD1	100	82.051	ENSPEMG00000000497	Rpusd1	100	82.372	Peromyscus_maniculatus_bairdii
ENSCSAG00000012121	RPUSD1	82	55.253	ENSPMAG00000001563	rpusd1	81	56.000	Petromyzon_marinus
ENSCSAG00000012121	RPUSD1	100	67.949	ENSPCIG00000021216	-	94	67.308	Phascolarctos_cinereus
ENSCSAG00000012121	RPUSD1	98	57.705	ENSPFOG00000007946	rpusd1	98	57.377	Poecilia_formosa
ENSCSAG00000012121	RPUSD1	98	57.705	ENSPLAG00000011925	rpusd1	98	57.377	Poecilia_latipinna
ENSCSAG00000012121	RPUSD1	98	57.049	ENSPMEG00000002910	rpusd1	98	56.721	Poecilia_mexicana
ENSCSAG00000012121	RPUSD1	98	57.190	ENSPREG00000019851	rpusd1	98	56.721	Poecilia_reticulata
ENSCSAG00000012121	RPUSD1	100	67.628	ENSPCAG00000002258	RPUSD1	100	67.628	Procavia_capensis
ENSCSAG00000012121	RPUSD1	100	88.782	ENSPCOG00000022582	RPUSD1	100	88.782	Propithecus_coquereli
ENSCSAG00000012121	RPUSD1	100	84.936	ENSPVAG00000013104	RPUSD1	100	84.936	Pteropus_vampyrus
ENSCSAG00000012121	RPUSD1	98	57.929	ENSPNYG00000024076	rpusd1	91	64.683	Pundamilia_nyererei
ENSCSAG00000012121	RPUSD1	98	56.209	ENSPNAG00000013806	rpusd1	87	62.403	Pygocentrus_nattereri
ENSCSAG00000012121	RPUSD1	100	83.654	ENSRNOG00000023639	Rpusd1	100	83.333	Rattus_norvegicus
ENSCSAG00000012121	RPUSD1	100	98.397	ENSRBIG00000030238	RPUSD1	100	98.397	Rhinopithecus_bieti
ENSCSAG00000012121	RPUSD1	100	98.397	ENSRROG00000036663	RPUSD1	100	98.397	Rhinopithecus_roxellana
ENSCSAG00000012121	RPUSD1	100	89.744	ENSSBOG00000033063	RPUSD1	100	90.705	Saimiri_boliviensis_boliviensis
ENSCSAG00000012121	RPUSD1	100	67.628	ENSSHAG00000013500	RPUSD1	100	67.628	Sarcophilus_harrisii
ENSCSAG00000012121	RPUSD1	99	60.841	ENSSFOG00015014394	rpusd1	99	60.390	Scleropages_formosus
ENSCSAG00000012121	RPUSD1	98	56.066	ENSSMAG00000008045	rpusd1	91	56.066	Scophthalmus_maximus
ENSCSAG00000012121	RPUSD1	81	67.194	ENSSDUG00000001829	rpusd1	95	58.689	Seriola_dumerili
ENSCSAG00000012121	RPUSD1	81	67.194	ENSSLDG00000020853	rpusd1	95	58.689	Seriola_lalandi_dorsalis
ENSCSAG00000012121	RPUSD1	54	89.820	ENSSARG00000011187	-	100	89.820	Sorex_araneus
ENSCSAG00000012121	RPUSD1	63	53.535	ENSSPUG00000005119	-	100	53.266	Sphenodon_punctatus
ENSCSAG00000012121	RPUSD1	98	56.721	ENSSPAG00000012708	rpusd1	98	56.721	Stegastes_partitus
ENSCSAG00000012121	RPUSD1	100	85.897	ENSSSCG00000008000	RPUSD1	98	89.764	Sus_scrofa
ENSCSAG00000012121	RPUSD1	82	72.157	ENSTGUG00000015375	RPUSD1	100	72.157	Taeniopygia_guttata
ENSCSAG00000012121	RPUSD1	98	56.311	ENSTRUG00000003041	rpusd1	98	56.494	Takifugu_rubripes
ENSCSAG00000012121	RPUSD1	98	53.268	ENSTNIG00000002660	rpusd1	99	53.595	Tetraodon_nigroviridis
ENSCSAG00000012121	RPUSD1	99	87.460	ENSTTRG00000010167	RPUSD1	99	87.460	Tursiops_truncatus
ENSCSAG00000012121	RPUSD1	100	80.769	ENSUAMG00000012736	RPUSD1	100	80.769	Ursus_americanus
ENSCSAG00000012121	RPUSD1	100	80.769	ENSUMAG00000021174	RPUSD1	100	80.769	Ursus_maritimus
ENSCSAG00000012121	RPUSD1	99	80.707	ENSVVUG00000012357	RPUSD1	99	80.707	Vulpes_vulpes
ENSCSAG00000012121	RPUSD1	100	60.577	ENSXETG00000007184	rpusd1	100	59.936	Xenopus_tropicalis
ENSCSAG00000012121	RPUSD1	98	56.209	ENSXCOG00000017930	rpusd1	98	55.410	Xiphophorus_couchianus
ENSCSAG00000012121	RPUSD1	98	56.863	ENSXMAG00000024084	rpusd1	98	56.393	Xiphophorus_maculatus