EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000012336 (Gene tree)
Gene ID: 103233592
Gene Symbol: POLR2E
Alias: RPABC1|RPB5|XAP4|hRPB25|hsRPB5
Full Name: RNA polymerase II subunit E
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 13600 bases
Position: chr6:841615-855214
Accession: 103233592
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000008521	RNA_pol_Rpb5_N	PF03871.14	5.5e-35	1	1
ENSCSAP00000008521	RNA_pol_Rpb5_C	PF01191.19	4.3e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000010427	POLR2E-201	3745	-	ENSCSAP00000008521	210 (aa)	XP_007992763	A0A0D9RIT2

Gene Model

Click here to download ENSCSAG00000012336's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03020	RNA polymerase	KEGG
csab04623	Cytosolic DNA-sensing pathway	KEGG
csab05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000012336's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000012336	POLR2E	100	99.524	ENSG00000099817	POLR2E	100	99.524	Homo_sapiens
ENSCSAG00000012336	POLR2E	100	95.714	ENSAPOG00000002935	polr2eb	100	95.714	Acanthochromis_polyacanthus
ENSCSAG00000012336	POLR2E	100	100.000	ENSAMEG00000003159	POLR2E	100	100.000	Ailuropoda_melanoleuca
ENSCSAG00000012336	POLR2E	100	83.333	ENSACIG00000024371	polr2eb	100	83.333	Amphilophus_citrinellus
ENSCSAG00000012336	POLR2E	100	95.714	ENSAOCG00000018166	polr2eb	100	95.714	Amphiprion_ocellaris
ENSCSAG00000012336	POLR2E	100	95.714	ENSAPEG00000009000	polr2eb	100	95.714	Amphiprion_percula
ENSCSAG00000012336	POLR2E	100	95.714	ENSATEG00000023760	polr2eb	100	95.714	Anabas_testudineus
ENSCSAG00000012336	POLR2E	100	100.000	ENSANAG00000038488	POLR2E	100	100.000	Aotus_nancymaae
ENSCSAG00000012336	POLR2E	100	96.190	ENSACLG00000005254	polr2eb	100	96.190	Astatotilapia_calliptera
ENSCSAG00000012336	POLR2E	100	96.190	ENSAMXG00000018915	POLR2E	100	96.190	Astyanax_mexicanus
ENSCSAG00000012336	POLR2E	100	100.000	ENSBTAG00000020776	POLR2E	100	100.000	Bos_taurus
ENSCSAG00000012336	POLR2E	99	77.885	WBGene00019246	rpb-5	99	77.885	Caenorhabditis_elegans
ENSCSAG00000012336	POLR2E	67	95.714	ENSCJAG00000007666	-	77	95.714	Callithrix_jacchus
ENSCSAG00000012336	POLR2E	100	96.667	ENSCAFG00000019546	POLR2E	100	96.667	Canis_familiaris
ENSCSAG00000012336	POLR2E	100	100.000	ENSCAFG00020017111	POLR2E	100	100.000	Canis_lupus_dingo
ENSCSAG00000012336	POLR2E	100	100.000	ENSCHIG00000014151	POLR2E	100	100.000	Capra_hircus
ENSCSAG00000012336	POLR2E	100	81.395	ENSTSYG00000026377	POLR2E	100	81.395	Carlito_syrichta
ENSCSAG00000012336	POLR2E	91	100.000	ENSCAPG00000010843	POLR2E	93	100.000	Cavia_aperea
ENSCSAG00000012336	POLR2E	100	100.000	ENSCPOG00000001542	POLR2E	100	100.000	Cavia_porcellus
ENSCSAG00000012336	POLR2E	100	100.000	ENSCCAG00000025658	POLR2E	100	100.000	Cebus_capucinus
ENSCSAG00000012336	POLR2E	100	100.000	ENSCATG00000008926	POLR2E	100	100.000	Cercocebus_atys
ENSCSAG00000012336	POLR2E	98	76.585	ENSCLAG00000009238	-	100	76.585	Chinchilla_lanigera
ENSCSAG00000012336	POLR2E	100	99.524	ENSCLAG00000014874	-	100	99.524	Chinchilla_lanigera
ENSCSAG00000012336	POLR2E	100	99.524	ENSCPBG00000009702	POLR2E	100	99.524	Chrysemys_picta_bellii
ENSCSAG00000012336	POLR2E	100	86.190	ENSCING00000024933	-	99	86.190	Ciona_intestinalis
ENSCSAG00000012336	POLR2E	100	100.000	ENSCANG00000025560	POLR2E	100	100.000	Colobus_angolensis_palliatus
ENSCSAG00000012336	POLR2E	100	99.048	ENSCGRG00001022927	Polr2e	100	99.048	Cricetulus_griseus_chok1gshd
ENSCSAG00000012336	POLR2E	100	92.558	ENSCGRG00000016441	Polr2e	100	92.558	Cricetulus_griseus_crigri
ENSCSAG00000012336	POLR2E	100	94.762	ENSCSEG00000007107	polr2eb	92	94.762	Cynoglossus_semilaevis
ENSCSAG00000012336	POLR2E	100	95.714	ENSCVAG00000019940	polr2eb	100	95.714	Cyprinodon_variegatus
ENSCSAG00000012336	POLR2E	100	94.762	ENSDARG00000026183	polr2eb	100	94.762	Danio_rerio
ENSCSAG00000012336	POLR2E	90	100.000	ENSDNOG00000044994	POLR2E	84	100.000	Dasypus_novemcinctus
ENSCSAG00000012336	POLR2E	100	100.000	ENSDORG00000001154	Polr2e	100	100.000	Dipodomys_ordii
ENSCSAG00000012336	POLR2E	99	85.646	FBgn0033571	Rpb5	99	85.646	Drosophila_melanogaster
ENSCSAG00000012336	POLR2E	75	91.720	ENSEBUG00000010159	-	76	91.720	Eptatretus_burgeri
ENSCSAG00000012336	POLR2E	69	93.793	ENSEASG00005021615	POLR2E	67	87.654	Equus_asinus_asinus
ENSCSAG00000012336	POLR2E	91	98.953	ENSECAG00000011124	POLR2E	100	87.143	Equus_caballus
ENSCSAG00000012336	POLR2E	100	93.333	ENSELUG00000020646	polr2e	100	93.333	Esox_lucius
ENSCSAG00000012336	POLR2E	100	94.286	ENSELUG00000005815	POLR2E	100	94.286	Esox_lucius
ENSCSAG00000012336	POLR2E	100	99.524	ENSFCAG00000007318	POLR2E	100	99.524	Felis_catus
ENSCSAG00000012336	POLR2E	91	99.479	ENSFALG00000013986	POLR2E	99	99.479	Ficedula_albicollis
ENSCSAG00000012336	POLR2E	100	100.000	ENSFDAG00000014539	POLR2E	100	100.000	Fukomys_damarensis
ENSCSAG00000012336	POLR2E	100	95.714	ENSFHEG00000022398	polr2eb	100	95.714	Fundulus_heteroclitus
ENSCSAG00000012336	POLR2E	100	94.286	ENSGMOG00000007615	polr2eb	100	94.286	Gadus_morhua
ENSCSAG00000012336	POLR2E	100	99.524	ENSGALG00000002591	POLR2E	100	99.524	Gallus_gallus
ENSCSAG00000012336	POLR2E	100	96.190	ENSGAFG00000005087	polr2eb	100	96.190	Gambusia_affinis
ENSCSAG00000012336	POLR2E	100	94.286	ENSGACG00000013247	polr2eb	100	94.286	Gasterosteus_aculeatus
ENSCSAG00000012336	POLR2E	100	99.524	ENSGAGG00000008356	POLR2E	100	99.524	Gopherus_agassizii
ENSCSAG00000012336	POLR2E	100	100.000	ENSGGOG00000011267	POLR2E	100	100.000	Gorilla_gorilla
ENSCSAG00000012336	POLR2E	68	90.141	ENSHBUG00000011099	polr2eb	100	90.141	Haplochromis_burtoni
ENSCSAG00000012336	POLR2E	100	99.048	ENSHGLG00000013330	POLR2E	100	99.048	Heterocephalus_glaber_female
ENSCSAG00000012336	POLR2E	100	99.048	ENSHGLG00100011014	POLR2E	100	99.048	Heterocephalus_glaber_male
ENSCSAG00000012336	POLR2E	100	94.286	ENSHCOG00000000906	polr2eb	100	94.286	Hippocampus_comes
ENSCSAG00000012336	POLR2E	53	91.964	ENSHCOG00000012099	-	88	91.964	Hippocampus_comes
ENSCSAG00000012336	POLR2E	100	95.714	ENSIPUG00000019801	polr2e	100	95.714	Ictalurus_punctatus
ENSCSAG00000012336	POLR2E	100	100.000	ENSSTOG00000002853	POLR2E	100	100.000	Ictidomys_tridecemlineatus
ENSCSAG00000012336	POLR2E	77	81.366	ENSJJAG00000015812	-	100	81.366	Jaculus_jaculus
ENSCSAG00000012336	POLR2E	100	99.048	ENSJJAG00000016595	-	100	99.048	Jaculus_jaculus
ENSCSAG00000012336	POLR2E	100	80.000	ENSJJAG00000003145	-	100	80.000	Jaculus_jaculus
ENSCSAG00000012336	POLR2E	100	95.714	ENSKMAG00000005954	polr2eb	100	95.714	Kryptolebias_marmoratus
ENSCSAG00000012336	POLR2E	100	95.714	ENSLBEG00000024802	polr2eb	100	95.714	Labrus_bergylta
ENSCSAG00000012336	POLR2E	100	95.714	ENSLACG00000013686	POLR2E	100	95.714	Latimeria_chalumnae
ENSCSAG00000012336	POLR2E	77	96.914	ENSLOCG00000004599	POLR2E	100	96.914	Lepisosteus_oculatus
ENSCSAG00000012336	POLR2E	100	80.189	ENSLAFG00000025587	POLR2E	100	80.189	Loxodonta_africana
ENSCSAG00000012336	POLR2E	100	100.000	ENSMFAG00000002884	POLR2E	100	100.000	Macaca_fascicularis
ENSCSAG00000012336	POLR2E	100	100.000	ENSMMUG00000013927	POLR2E	100	100.000	Macaca_mulatta
ENSCSAG00000012336	POLR2E	100	100.000	ENSMNEG00000034046	-	100	100.000	Macaca_nemestrina
ENSCSAG00000012336	POLR2E	100	66.351	ENSMNEG00000033452	-	100	66.351	Macaca_nemestrina
ENSCSAG00000012336	POLR2E	92	81.347	ENSMLEG00000012405	POLR2E	94	81.347	Mandrillus_leucophaeus
ENSCSAG00000012336	POLR2E	100	95.714	ENSMAMG00000018703	polr2eb	100	95.714	Mastacembelus_armatus
ENSCSAG00000012336	POLR2E	90	95.789	ENSMZEG00005010796	polr2eb	96	95.789	Maylandia_zebra
ENSCSAG00000012336	POLR2E	100	98.104	ENSMGAG00000003769	POLR2E	100	98.104	Meleagris_gallopavo
ENSCSAG00000012336	POLR2E	92	98.446	ENSMAUG00000010125	-	100	98.953	Mesocricetus_auratus
ENSCSAG00000012336	POLR2E	100	67.619	ENSMAUG00000011003	-	100	67.619	Mesocricetus_auratus
ENSCSAG00000012336	POLR2E	100	100.000	ENSMICG00000013063	POLR2E	100	100.000	Microcebus_murinus
ENSCSAG00000012336	POLR2E	100	99.048	ENSMOCG00000013414	Polr2e	100	99.048	Microtus_ochrogaster
ENSCSAG00000012336	POLR2E	100	81.429	ENSMMOG00000001161	polr2eb	100	81.429	Mola_mola
ENSCSAG00000012336	POLR2E	91	86.387	ENSMMOG00000001167	polr2eb	88	86.387	Mola_mola
ENSCSAG00000012336	POLR2E	100	99.524	ENSMODG00000005494	POLR2E	100	99.524	Monodelphis_domestica
ENSCSAG00000012336	POLR2E	100	96.190	ENSMALG00000021888	polr2eb	100	96.190	Monopterus_albus
ENSCSAG00000012336	POLR2E	100	99.048	MGP_CAROLIEiJ_G0015561	Polr2e	100	99.048	Mus_caroli
ENSCSAG00000012336	POLR2E	100	99.048	ENSMUSG00000004667	Polr2e	100	99.048	Mus_musculus
ENSCSAG00000012336	POLR2E	100	99.048	MGP_PahariEiJ_G0030974	Polr2e	100	99.048	Mus_pahari
ENSCSAG00000012336	POLR2E	100	99.048	MGP_SPRETEiJ_G0016379	Polr2e	100	99.048	Mus_spretus
ENSCSAG00000012336	POLR2E	100	99.048	ENSMPUG00000008953	POLR2E	100	99.048	Mustela_putorius_furo
ENSCSAG00000012336	POLR2E	66	94.203	ENSMLUG00000006376	-	100	82.716	Myotis_lucifugus
ENSCSAG00000012336	POLR2E	100	100.000	ENSMLUG00000013193	POLR2E	100	100.000	Myotis_lucifugus
ENSCSAG00000012336	POLR2E	85	74.302	ENSNGAG00000017344	-	96	74.302	Nannospalax_galili
ENSCSAG00000012336	POLR2E	100	99.048	ENSNGAG00000001147	Polr2e	100	99.048	Nannospalax_galili
ENSCSAG00000012336	POLR2E	100	83.333	ENSNBRG00000022772	polr2eb	100	83.333	Neolamprologus_brichardi
ENSCSAG00000012336	POLR2E	100	76.190	ENSNLEG00000031364	-	100	76.190	Nomascus_leucogenys
ENSCSAG00000012336	POLR2E	100	96.209	ENSNLEG00000001207	-	100	96.209	Nomascus_leucogenys
ENSCSAG00000012336	POLR2E	100	87.143	ENSOPRG00000008331	POLR2E	100	87.143	Ochotona_princeps
ENSCSAG00000012336	POLR2E	100	100.000	ENSODEG00000013230	-	100	100.000	Octodon_degus
ENSCSAG00000012336	POLR2E	100	72.381	ENSODEG00000011490	-	100	72.381	Octodon_degus
ENSCSAG00000012336	POLR2E	89	88.710	ENSODEG00000007985	-	100	88.710	Octodon_degus
ENSCSAG00000012336	POLR2E	100	95.714	ENSONIG00000002519	polr2eb	100	95.714	Oreochromis_niloticus
ENSCSAG00000012336	POLR2E	100	96.190	ENSORLG00000015346	polr2eb	100	96.190	Oryzias_latipes
ENSCSAG00000012336	POLR2E	100	96.190	ENSORLG00020020700	polr2e	100	96.190	Oryzias_latipes_hni
ENSCSAG00000012336	POLR2E	100	96.190	ENSORLG00015016842	polr2e	100	96.190	Oryzias_latipes_hsok
ENSCSAG00000012336	POLR2E	100	95.714	ENSOMEG00000002709	polr2eb	100	95.714	Oryzias_melastigma
ENSCSAG00000012336	POLR2E	100	100.000	ENSOGAG00000012311	POLR2E	100	100.000	Otolemur_garnettii
ENSCSAG00000012336	POLR2E	100	100.000	ENSOARG00000010994	POLR2E	100	100.000	Ovis_aries
ENSCSAG00000012336	POLR2E	91	100.000	ENSPPAG00000003145	POLR2E	100	100.000	Pan_paniscus
ENSCSAG00000012336	POLR2E	100	99.524	ENSPPRG00000000777	POLR2E	100	99.524	Panthera_pardus
ENSCSAG00000012336	POLR2E	91	77.604	ENSPTIG00000012237	POLR2E	98	94.079	Panthera_tigris_altaica
ENSCSAG00000012336	POLR2E	100	100.000	ENSPTRG00000010183	POLR2E	100	100.000	Pan_troglodytes
ENSCSAG00000012336	POLR2E	100	100.000	ENSPANG00000018011	POLR2E	100	100.000	Papio_anubis
ENSCSAG00000012336	POLR2E	100	94.762	ENSPKIG00000009607	POLR2E	100	94.762	Paramormyrops_kingsleyae
ENSCSAG00000012336	POLR2E	100	94.762	ENSPKIG00000024123	POLR2E	100	94.762	Paramormyrops_kingsleyae
ENSCSAG00000012336	POLR2E	98	95.610	ENSPSIG00000002870	POLR2E	99	95.610	Pelodiscus_sinensis
ENSCSAG00000012336	POLR2E	100	82.857	ENSPMGG00000014354	polr2eb	100	82.857	Periophthalmus_magnuspinnatus
ENSCSAG00000012336	POLR2E	100	99.048	ENSPEMG00000023261	Polr2e	100	99.048	Peromyscus_maniculatus_bairdii
ENSCSAG00000012336	POLR2E	90	99.471	ENSPCIG00000007312	POLR2E	75	99.471	Phascolarctos_cinereus
ENSCSAG00000012336	POLR2E	100	96.190	ENSPFOG00000005734	polr2eb	100	96.190	Poecilia_formosa
ENSCSAG00000012336	POLR2E	100	96.190	ENSPLAG00000014496	polr2eb	100	96.190	Poecilia_latipinna
ENSCSAG00000012336	POLR2E	100	96.190	ENSPMEG00000008053	polr2eb	100	96.190	Poecilia_mexicana
ENSCSAG00000012336	POLR2E	100	96.190	ENSPREG00000006489	polr2eb	100	96.190	Poecilia_reticulata
ENSCSAG00000012336	POLR2E	100	92.417	ENSPPYG00000009305	POLR2E	100	92.417	Pongo_abelii
ENSCSAG00000012336	POLR2E	53	100.000	ENSPCAG00000016605	POLR2E	100	100.000	Procavia_capensis
ENSCSAG00000012336	POLR2E	100	100.000	ENSPCOG00000014491	POLR2E	100	100.000	Propithecus_coquereli
ENSCSAG00000012336	POLR2E	65	100.000	ENSPVAG00000007718	-	65	100.000	Pteropus_vampyrus
ENSCSAG00000012336	POLR2E	90	95.789	ENSPNYG00000019797	polr2eb	96	95.789	Pundamilia_nyererei
ENSCSAG00000012336	POLR2E	100	95.714	ENSPNAG00000026263	POLR2E	100	95.714	Pygocentrus_nattereri
ENSCSAG00000012336	POLR2E	100	99.048	ENSRNOG00000013545	Polr2e	100	99.048	Rattus_norvegicus
ENSCSAG00000012336	POLR2E	100	100.000	ENSRBIG00000028726	-	100	100.000	Rhinopithecus_bieti
ENSCSAG00000012336	POLR2E	100	73.934	ENSRBIG00000027259	-	100	73.934	Rhinopithecus_bieti
ENSCSAG00000012336	POLR2E	100	100.000	ENSRROG00000043763	POLR2E	100	100.000	Rhinopithecus_roxellana
ENSCSAG00000012336	POLR2E	99	43.578	YBR154C	RPB5	98	43.578	Saccharomyces_cerevisiae
ENSCSAG00000012336	POLR2E	100	100.000	ENSSBOG00000027241	POLR2E	100	100.000	Saimiri_boliviensis_boliviensis
ENSCSAG00000012336	POLR2E	100	99.524	ENSSHAG00000010690	POLR2E	100	99.524	Sarcophilus_harrisii
ENSCSAG00000012336	POLR2E	100	95.714	ENSSFOG00015006073	polr2e	100	95.714	Scleropages_formosus
ENSCSAG00000012336	POLR2E	100	95.714	ENSSMAG00000012782	polr2eb	100	95.714	Scophthalmus_maximus
ENSCSAG00000012336	POLR2E	100	95.714	ENSSDUG00000003352	polr2eb	100	95.714	Seriola_dumerili
ENSCSAG00000012336	POLR2E	100	95.714	ENSSLDG00000004965	polr2eb	100	95.714	Seriola_lalandi_dorsalis
ENSCSAG00000012336	POLR2E	100	98.095	ENSSPUG00000006114	POLR2E	100	98.095	Sphenodon_punctatus
ENSCSAG00000012336	POLR2E	100	95.714	ENSSPAG00000017556	polr2eb	100	95.714	Stegastes_partitus
ENSCSAG00000012336	POLR2E	100	100.000	ENSSSCG00000021472	POLR2E	100	100.000	Sus_scrofa
ENSCSAG00000012336	POLR2E	66	90.000	ENSTGUG00000000922	POLR2E	99	90.000	Taeniopygia_guttata
ENSCSAG00000012336	POLR2E	96	91.045	ENSTRUG00000018238	polr2eb	100	82.857	Takifugu_rubripes
ENSCSAG00000012336	POLR2E	100	95.714	ENSTNIG00000013187	polr2eb	100	95.714	Tetraodon_nigroviridis
ENSCSAG00000012336	POLR2E	100	99.524	ENSTTRG00000001484	POLR2E	100	99.524	Tursiops_truncatus
ENSCSAG00000012336	POLR2E	92	96.907	ENSUAMG00000009166	POLR2E	100	86.667	Ursus_americanus
ENSCSAG00000012336	POLR2E	100	100.000	ENSVVUG00000022818	POLR2E	54	100.000	Vulpes_vulpes
ENSCSAG00000012336	POLR2E	100	97.619	ENSXETG00000003291	polr2e	100	97.619	Xenopus_tropicalis
ENSCSAG00000012336	POLR2E	100	83.333	ENSXCOG00000009197	polr2eb	100	83.333	Xiphophorus_couchianus
ENSCSAG00000012336	POLR2E	100	96.190	ENSXMAG00000026495	polr2eb	100	96.190	Xiphophorus_maculatus