EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000012340 (Gene tree)
Gene ID: 103237188
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 31542 bases
Position: chr8:93043277-93074818
Accession: 103237188
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000008524	POP1	PF06978.11	6.1e-39	1	2
ENSCSAP00000008524	POP1	PF06978.11	6.1e-39	2	2
ENSCSAP00000008524	POPLD	PF08170.12	7.5e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000010430	POP1-201	4463	XM_008001178	ENSCSAP00000008524	929 (aa)	XP_007999369	A0A0D9RIT5

Gene Model

Click here to download ENSCSAG00000012340's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03008	Ribosome biogenesis in eukaryotes	KEGG
csab03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000012340's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000012340	POP1	99	96.204	ENSG00000104356	POP1	90	96.204	Homo_sapiens
ENSCSAG00000012340	POP1	99	50.419	ENSAPOG00000008198	pop1	92	50.262	Acanthochromis_polyacanthus
ENSCSAG00000012340	POP1	99	80.324	ENSAMEG00000000556	POP1	90	80.324	Ailuropoda_melanoleuca
ENSCSAG00000012340	POP1	99	49.417	ENSACIG00000004169	POP1	93	49.363	Amphilophus_citrinellus
ENSCSAG00000012340	POP1	99	49.425	ENSAOCG00000010991	pop1	92	49.423	Amphiprion_ocellaris
ENSCSAG00000012340	POP1	99	47.871	ENSAPEG00000007607	pop1	95	48.075	Amphiprion_percula
ENSCSAG00000012340	POP1	98	48.319	ENSATEG00000024814	POP1	93	48.323	Anabas_testudineus
ENSCSAG00000012340	POP1	99	63.519	ENSAPLG00000014418	POP1	98	63.305	Anas_platyrhynchos
ENSCSAG00000012340	POP1	99	59.203	ENSACAG00000016083	POP1	90	58.999	Anolis_carolinensis
ENSCSAG00000012340	POP1	87	97.447	ENSANAG00000026360	POP1	90	97.447	Aotus_nancymaae
ENSCSAG00000012340	POP1	91	56.840	ENSACLG00000010951	pop1	91	49.526	Astatotilapia_calliptera
ENSCSAG00000012340	POP1	99	47.465	ENSAMXG00000014483	POP1	92	47.083	Astyanax_mexicanus
ENSCSAG00000012340	POP1	99	80.694	ENSBTAG00000012596	POP1	90	80.694	Bos_taurus
ENSCSAG00000012340	POP1	99	92.842	ENSCJAG00000015567	POP1	91	92.842	Callithrix_jacchus
ENSCSAG00000012340	POP1	99	80.477	ENSCAFG00000000469	POP1	90	80.477	Canis_familiaris
ENSCSAG00000012340	POP1	99	81.779	ENSCAFG00020026765	POP1	90	81.779	Canis_lupus_dingo
ENSCSAG00000012340	POP1	99	80.932	ENSCHIG00000017066	POP1	90	80.823	Capra_hircus
ENSCSAG00000012340	POP1	99	85.683	ENSTSYG00000003097	POP1	90	85.683	Carlito_syrichta
ENSCSAG00000012340	POP1	99	77.238	ENSCAPG00000007251	POP1	90	77.238	Cavia_aperea
ENSCSAG00000012340	POP1	99	80.369	ENSCPOG00000002901	POP1	90	80.369	Cavia_porcellus
ENSCSAG00000012340	POP1	99	93.167	ENSCCAG00000018939	POP1	91	93.167	Cebus_capucinus
ENSCSAG00000012340	POP1	99	98.156	ENSCATG00000040916	POP1	90	98.156	Cercocebus_atys
ENSCSAG00000012340	POP1	99	81.887	ENSCLAG00000007208	POP1	87	81.887	Chinchilla_lanigera
ENSCSAG00000012340	POP1	99	79.393	ENSCHOG00000011432	POP1	94	79.176	Choloepus_hoffmanni
ENSCSAG00000012340	POP1	99	67.714	ENSCPBG00000006373	POP1	90	67.714	Chrysemys_picta_bellii
ENSCSAG00000012340	POP1	89	39.076	ENSCING00000008323	-	88	37.121	Ciona_intestinalis
ENSCSAG00000012340	POP1	99	97.397	ENSCANG00000001647	POP1	90	97.397	Colobus_angolensis_palliatus
ENSCSAG00000012340	POP1	98	76.425	ENSCGRG00001017308	Pop1	90	75.922	Cricetulus_griseus_chok1gshd
ENSCSAG00000012340	POP1	98	72.259	ENSCGRG00000010824	Pop1	92	71.800	Cricetulus_griseus_crigri
ENSCSAG00000012340	POP1	99	47.474	ENSCSEG00000008737	POP1	91	48.164	Cynoglossus_semilaevis
ENSCSAG00000012340	POP1	98	48.765	ENSCVAG00000022248	pop1	92	49.153	Cyprinodon_variegatus
ENSCSAG00000012340	POP1	99	77.696	ENSDNOG00000019974	POP1	90	77.696	Dasypus_novemcinctus
ENSCSAG00000012340	POP1	99	71.909	ENSDORG00000015384	Pop1	89	71.258	Dipodomys_ordii
ENSCSAG00000012340	POP1	67	32.909	FBgn0026702	l(1)G0045	77	31.123	Drosophila_melanogaster
ENSCSAG00000012340	POP1	87	70.513	ENSETEG00000007839	POP1	78	70.513	Echinops_telfairi
ENSCSAG00000012340	POP1	53	35.458	ENSEBUG00000014694	-	99	35.458	Eptatretus_burgeri
ENSCSAG00000012340	POP1	99	83.406	ENSEASG00005003189	POP1	89	83.406	Equus_asinus_asinus
ENSCSAG00000012340	POP1	99	83.080	ENSECAG00000024236	POP1	90	83.080	Equus_caballus
ENSCSAG00000012340	POP1	62	95.181	ENSEEUG00000003050	-	58	95.181	Erinaceus_europaeus
ENSCSAG00000012340	POP1	99	49.205	ENSELUG00000003526	pop1	91	48.674	Esox_lucius
ENSCSAG00000012340	POP1	99	83.839	ENSFCAG00000002168	POP1	90	83.839	Felis_catus
ENSCSAG00000012340	POP1	99	62.703	ENSFALG00000005711	POP1	90	62.703	Ficedula_albicollis
ENSCSAG00000012340	POP1	99	82.538	ENSFDAG00000017068	POP1	90	82.538	Fukomys_damarensis
ENSCSAG00000012340	POP1	99	48.995	ENSFHEG00000019518	pop1	92	48.889	Fundulus_heteroclitus
ENSCSAG00000012340	POP1	98	45.998	ENSGMOG00000000659	POP1	94	46.251	Gadus_morhua
ENSCSAG00000012340	POP1	98	49.407	ENSGAFG00000019770	POP1	91	49.467	Gambusia_affinis
ENSCSAG00000012340	POP1	98	48.391	ENSGACG00000003499	pop1	90	48.568	Gasterosteus_aculeatus
ENSCSAG00000012340	POP1	99	67.064	ENSGAGG00000011737	POP1	88	67.064	Gopherus_agassizii
ENSCSAG00000012340	POP1	99	96.204	ENSGGOG00000003176	POP1	90	96.204	Gorilla_gorilla
ENSCSAG00000012340	POP1	98	49.095	ENSHBUG00000021583	pop1	91	49.315	Haplochromis_burtoni
ENSCSAG00000012340	POP1	98	81.668	ENSHGLG00000006029	POP1	90	81.779	Heterocephalus_glaber_female
ENSCSAG00000012340	POP1	98	81.668	ENSHGLG00100016879	POP1	90	81.779	Heterocephalus_glaber_male
ENSCSAG00000012340	POP1	99	49.201	ENSHCOG00000013888	pop1	96	48.374	Hippocampus_comes
ENSCSAG00000012340	POP1	99	44.814	ENSIPUG00000018336	pop1	84	61.446	Ictalurus_punctatus
ENSCSAG00000012340	POP1	99	83.297	ENSSTOG00000011455	POP1	87	83.297	Ictidomys_tridecemlineatus
ENSCSAG00000012340	POP1	99	77.549	ENSJJAG00000013325	Pop1	90	77.549	Jaculus_jaculus
ENSCSAG00000012340	POP1	99	48.879	ENSKMAG00000001346	POP1	92	48.663	Kryptolebias_marmoratus
ENSCSAG00000012340	POP1	98	47.845	ENSLBEG00000024457	POP1	95	47.619	Labrus_bergylta
ENSCSAG00000012340	POP1	99	56.653	ENSLACG00000012498	POP1	96	56.757	Latimeria_chalumnae
ENSCSAG00000012340	POP1	99	52.998	ENSLOCG00000009817	POP1	90	52.570	Lepisosteus_oculatus
ENSCSAG00000012340	POP1	99	83.297	ENSLAFG00000010770	POP1	90	83.297	Loxodonta_africana
ENSCSAG00000012340	POP1	99	98.373	ENSMFAG00000000347	POP1	90	98.373	Macaca_fascicularis
ENSCSAG00000012340	POP1	99	97.722	ENSMNEG00000036870	POP1	90	97.722	Macaca_nemestrina
ENSCSAG00000012340	POP1	99	98.265	ENSMLEG00000034986	POP1	90	98.265	Mandrillus_leucophaeus
ENSCSAG00000012340	POP1	98	49.414	ENSMAMG00000004040	pop1	91	49.263	Mastacembelus_armatus
ENSCSAG00000012340	POP1	98	49.308	ENSMZEG00005025448	pop1	91	49.526	Maylandia_zebra
ENSCSAG00000012340	POP1	99	61.409	ENSMGAG00000012167	POP1	91	61.409	Meleagris_gallopavo
ENSCSAG00000012340	POP1	99	76.598	ENSMAUG00000017537	Pop1	90	76.598	Mesocricetus_auratus
ENSCSAG00000012340	POP1	99	86.985	ENSMICG00000004361	POP1	90	86.985	Microcebus_murinus
ENSCSAG00000012340	POP1	99	75.271	ENSMOCG00000006356	Pop1	90	75.922	Microtus_ochrogaster
ENSCSAG00000012340	POP1	99	47.186	ENSMMOG00000018242	pop1	93	47.129	Mola_mola
ENSCSAG00000012340	POP1	99	70.215	ENSMODG00000006561	POP1	90	70.626	Monodelphis_domestica
ENSCSAG00000012340	POP1	90	55.772	ENSMALG00000012621	POP1	91	49.206	Monopterus_albus
ENSCSAG00000012340	POP1	99	76.247	MGP_CAROLIEiJ_G0019726	Pop1	90	76.247	Mus_caroli
ENSCSAG00000012340	POP1	99	76.681	ENSMUSG00000022325	Pop1	90	76.681	Mus_musculus
ENSCSAG00000012340	POP1	99	76.681	MGP_PahariEiJ_G0019735	Pop1	90	76.681	Mus_pahari
ENSCSAG00000012340	POP1	99	76.139	MGP_SPRETEiJ_G0020622	Pop1	90	76.139	Mus_spretus
ENSCSAG00000012340	POP1	99	81.838	ENSMPUG00000015250	POP1	90	81.405	Mustela_putorius_furo
ENSCSAG00000012340	POP1	99	77.489	ENSMLUG00000010204	POP1	90	77.273	Myotis_lucifugus
ENSCSAG00000012340	POP1	99	81.236	ENSNGAG00000001582	Pop1	90	81.236	Nannospalax_galili
ENSCSAG00000012340	POP1	98	48.283	ENSNBRG00000002356	pop1	95	48.051	Neolamprologus_brichardi
ENSCSAG00000012340	POP1	99	94.902	ENSNLEG00000002541	POP1	90	94.902	Nomascus_leucogenys
ENSCSAG00000012340	POP1	99	61.373	ENSMEUG00000003118	POP1	94	61.373	Notamacropus_eugenii
ENSCSAG00000012340	POP1	99	78.525	ENSOPRG00000007667	POP1	90	78.308	Ochotona_princeps
ENSCSAG00000012340	POP1	98	79.737	ENSODEG00000003984	POP1	90	79.870	Octodon_degus
ENSCSAG00000012340	POP1	98	50.748	ENSONIG00000016445	pop1	90	50.951	Oreochromis_niloticus
ENSCSAG00000012340	POP1	54	95.000	ENSOANG00000001278	-	79	95.000	Ornithorhynchus_anatinus
ENSCSAG00000012340	POP1	99	82.232	ENSOCUG00000017400	POP1	90	82.232	Oryctolagus_cuniculus
ENSCSAG00000012340	POP1	99	49.947	ENSORLG00000002839	pop1	93	49.840	Oryzias_latipes
ENSCSAG00000012340	POP1	99	49.468	ENSORLG00020022450	POP1	96	49.574	Oryzias_latipes_hni
ENSCSAG00000012340	POP1	99	50.053	ENSORLG00015012746	POP1	92	49.947	Oryzias_latipes_hsok
ENSCSAG00000012340	POP1	98	48.971	ENSOMEG00000006915	pop1	92	49.464	Oryzias_melastigma
ENSCSAG00000012340	POP1	99	84.273	ENSOGAG00000001466	POP1	90	84.273	Otolemur_garnettii
ENSCSAG00000012340	POP1	99	96.204	ENSPPAG00000018410	POP1	90	96.204	Pan_paniscus
ENSCSAG00000012340	POP1	99	83.857	ENSPPRG00000005002	POP1	90	83.857	Panthera_pardus
ENSCSAG00000012340	POP1	99	84.290	ENSPTIG00000016527	POP1	90	84.290	Panthera_tigris_altaica
ENSCSAG00000012340	POP1	99	96.204	ENSPTRG00000020458	POP1	90	96.204	Pan_troglodytes
ENSCSAG00000012340	POP1	99	98.048	ENSPANG00000009704	POP1	90	98.048	Papio_anubis
ENSCSAG00000012340	POP1	99	50.478	ENSPKIG00000016325	POP1	91	50.000	Paramormyrops_kingsleyae
ENSCSAG00000012340	POP1	99	65.835	ENSPSIG00000012343	POP1	89	65.835	Pelodiscus_sinensis
ENSCSAG00000012340	POP1	99	49.305	ENSPMGG00000022253	POP1	95	48.891	Periophthalmus_magnuspinnatus
ENSCSAG00000012340	POP1	99	75.424	ENSPEMG00000023633	Pop1	90	75.424	Peromyscus_maniculatus_bairdii
ENSCSAG00000012340	POP1	99	43.506	ENSPMAG00000003209	POP1	100	43.717	Petromyzon_marinus
ENSCSAG00000012340	POP1	99	69.397	ENSPCIG00000012216	POP1	90	69.397	Phascolarctos_cinereus
ENSCSAG00000012340	POP1	98	50.539	ENSPFOG00000012490	POP1	91	50.374	Poecilia_formosa
ENSCSAG00000012340	POP1	98	50.431	ENSPLAG00000004646	POP1	91	50.267	Poecilia_latipinna
ENSCSAG00000012340	POP1	98	50.215	ENSPMEG00000019592	POP1	91	50.266	Poecilia_mexicana
ENSCSAG00000012340	POP1	98	50.432	ENSPREG00000020951	POP1	91	50.427	Poecilia_reticulata
ENSCSAG00000012340	POP1	99	95.553	ENSPPYG00000018777	POP1	90	95.553	Pongo_abelii
ENSCSAG00000012340	POP1	99	76.490	ENSPCAG00000016662	POP1	90	76.056	Procavia_capensis
ENSCSAG00000012340	POP1	99	87.419	ENSPCOG00000019420	POP1	90	87.419	Propithecus_coquereli
ENSCSAG00000012340	POP1	99	82.124	ENSPVAG00000014468	POP1	90	82.124	Pteropus_vampyrus
ENSCSAG00000012340	POP1	98	48.599	ENSPNYG00000004476	pop1	95	48.773	Pundamilia_nyererei
ENSCSAG00000012340	POP1	99	46.720	ENSPNAG00000000265	pop1	93	46.620	Pygocentrus_nattereri
ENSCSAG00000012340	POP1	99	77.766	ENSRNOG00000005243	Pop1	90	77.766	Rattus_norvegicus
ENSCSAG00000012340	POP1	99	97.180	ENSRBIG00000007996	POP1	90	97.180	Rhinopithecus_bieti
ENSCSAG00000012340	POP1	99	97.289	ENSRROG00000012334	POP1	90	97.289	Rhinopithecus_roxellana
ENSCSAG00000012340	POP1	99	92.733	ENSSBOG00000020830	POP1	91	92.733	Saimiri_boliviensis_boliviensis
ENSCSAG00000012340	POP1	99	70.378	ENSSHAG00000000296	POP1	90	70.378	Sarcophilus_harrisii
ENSCSAG00000012340	POP1	99	47.987	ENSSFOG00015007429	pop1	90	48.207	Scleropages_formosus
ENSCSAG00000012340	POP1	92	55.096	ENSSMAG00000010467	POP1	96	54.531	Scophthalmus_maximus
ENSCSAG00000012340	POP1	98	48.459	ENSSDUG00000007817	POP1	91	48.901	Seriola_dumerili
ENSCSAG00000012340	POP1	98	48.574	ENSSLDG00000012565	POP1	91	49.216	Seriola_lalandi_dorsalis
ENSCSAG00000012340	POP1	99	61.315	ENSSPUG00000003550	-	90	61.315	Sphenodon_punctatus
ENSCSAG00000012340	POP1	99	50.375	ENSSPAG00000014955	pop1	94	49.678	Stegastes_partitus
ENSCSAG00000012340	POP1	99	81.562	ENSSSCG00000006078	POP1	90	81.562	Sus_scrofa
ENSCSAG00000012340	POP1	99	57.451	ENSTGUG00000012011	-	98	57.543	Taeniopygia_guttata
ENSCSAG00000012340	POP1	98	48.596	ENSTRUG00000010856	pop1	92	48.488	Takifugu_rubripes
ENSCSAG00000012340	POP1	99	48.617	ENSTNIG00000013297	pop1	96	48.617	Tetraodon_nigroviridis
ENSCSAG00000012340	POP1	99	80.152	ENSTBEG00000014214	POP1	94	80.152	Tupaia_belangeri
ENSCSAG00000012340	POP1	99	80.477	ENSTTRG00000016071	POP1	90	80.477	Tursiops_truncatus
ENSCSAG00000012340	POP1	99	81.257	ENSUAMG00000017309	POP1	94	81.257	Ursus_americanus
ENSCSAG00000012340	POP1	90	93.793	ENSUMAG00000016952	POP1	89	93.793	Ursus_maritimus
ENSCSAG00000012340	POP1	79	90.698	ENSVPAG00000008278	POP1	72	90.698	Vicugna_pacos
ENSCSAG00000012340	POP1	99	81.996	ENSVVUG00000010994	POP1	90	81.996	Vulpes_vulpes
ENSCSAG00000012340	POP1	98	45.161	ENSXCOG00000017043	POP1	90	44.872	Xiphophorus_couchianus
ENSCSAG00000012340	POP1	98	49.138	ENSXMAG00000002472	POP1	91	49.200	Xiphophorus_maculatus