EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000012478 (Gene tree)
Gene ID: 103240827
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 24959 bases
Position: chr13:87397636-87422594
Accession: 21185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000008628	CAF1	PF04857.20	8.3e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000010535	PNLDC1-201	5982	-	ENSCSAP00000008628	522 (aa)	-	A0A0D9RJ39

Gene Model

Click here to download ENSCSAG00000012478's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000012478's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000012478	PNLDC1	99	95.393	ENSG00000146453	PNLDC1	99	95.393	Homo_sapiens
ENSCSAG00000012478	PNLDC1	97	86.982	ENSAMEG00000015371	PNLDC1	95	86.982	Ailuropoda_melanoleuca
ENSCSAG00000012478	PNLDC1	99	56.489	ENSAPLG00000007014	PNLDC1	99	56.489	Anas_platyrhynchos
ENSCSAG00000012478	PNLDC1	97	59.332	ENSACAG00000013667	PNLDC1	95	59.332	Anolis_carolinensis
ENSCSAG00000012478	PNLDC1	98	92.141	ENSANAG00000034713	PNLDC1	95	92.229	Aotus_nancymaae
ENSCSAG00000012478	PNLDC1	99	85.714	ENSBTAG00000015166	PNLDC1	99	85.905	Bos_taurus
ENSCSAG00000012478	PNLDC1	98	92.534	ENSCJAG00000011865	PNLDC1	99	92.702	Callithrix_jacchus
ENSCSAG00000012478	PNLDC1	99	86.628	ENSCAFG00000000740	PNLDC1	97	86.628	Canis_familiaris
ENSCSAG00000012478	PNLDC1	99	85.078	ENSCAFG00020017742	PNLDC1	97	85.078	Canis_lupus_dingo
ENSCSAG00000012478	PNLDC1	99	83.946	ENSCHIG00000003141	PNLDC1	99	82.061	Capra_hircus
ENSCSAG00000012478	PNLDC1	98	88.212	ENSTSYG00000005606	PNLDC1	95	88.212	Carlito_syrichta
ENSCSAG00000012478	PNLDC1	89	65.806	ENSCAPG00000011893	PNLDC1	89	65.806	Cavia_aperea
ENSCSAG00000012478	PNLDC1	99	79.457	ENSCPOG00000019565	PNLDC1	97	79.457	Cavia_porcellus
ENSCSAG00000012478	PNLDC1	98	92.927	ENSCCAG00000026232	PNLDC1	95	92.927	Cebus_capucinus
ENSCSAG00000012478	PNLDC1	98	97.446	ENSCATG00000033196	PNLDC1	95	97.446	Cercocebus_atys
ENSCSAG00000012478	PNLDC1	97	83.268	ENSCLAG00000003228	PNLDC1	95	83.268	Chinchilla_lanigera
ENSCSAG00000012478	PNLDC1	95	64.529	ENSCPBG00000004050	PNLDC1	97	65.130	Chrysemys_picta_bellii
ENSCSAG00000012478	PNLDC1	100	96.552	ENSCANG00000043076	PNLDC1	100	96.552	Colobus_angolensis_palliatus
ENSCSAG00000012478	PNLDC1	98	65.029	ENSCGRG00001011981	-	94	65.029	Cricetulus_griseus_chok1gshd
ENSCSAG00000012478	PNLDC1	98	81.139	ENSCGRG00001007470	-	95	81.139	Cricetulus_griseus_chok1gshd
ENSCSAG00000012478	PNLDC1	98	67.191	ENSCGRG00000003103	-	94	67.191	Cricetulus_griseus_crigri
ENSCSAG00000012478	PNLDC1	98	81.139	ENSCGRG00000010221	-	95	81.139	Cricetulus_griseus_crigri
ENSCSAG00000012478	PNLDC1	99	84.200	ENSDNOG00000013709	PNLDC1	97	84.200	Dasypus_novemcinctus
ENSCSAG00000012478	PNLDC1	99	79.191	ENSDORG00000011517	Pnldc1	95	86.242	Dipodomys_ordii
ENSCSAG00000012478	PNLDC1	94	75.356	ENSETEG00000007587	PNLDC1	99	75.356	Echinops_telfairi
ENSCSAG00000012478	PNLDC1	99	79.127	ENSEASG00005019029	PNLDC1	97	79.127	Equus_asinus_asinus
ENSCSAG00000012478	PNLDC1	99	87.791	ENSECAG00000012898	PNLDC1	97	87.791	Equus_caballus
ENSCSAG00000012478	PNLDC1	69	84.375	ENSEEUG00000005717	-	86	84.375	Erinaceus_europaeus
ENSCSAG00000012478	PNLDC1	99	86.628	ENSFCAG00000002848	PNLDC1	97	86.628	Felis_catus
ENSCSAG00000012478	PNLDC1	96	55.644	ENSFALG00000012081	PNLDC1	99	55.644	Ficedula_albicollis
ENSCSAG00000012478	PNLDC1	98	84.086	ENSFDAG00000021334	PNLDC1	95	84.086	Fukomys_damarensis
ENSCSAG00000012478	PNLDC1	78	57.317	ENSGALG00000011624	PNLDC1	79	57.317	Gallus_gallus
ENSCSAG00000012478	PNLDC1	99	65.637	ENSGAGG00000015276	PNLDC1	100	66.461	Gopherus_agassizii
ENSCSAG00000012478	PNLDC1	98	95.285	ENSGGOG00000014077	PNLDC1	95	95.285	Gorilla_gorilla
ENSCSAG00000012478	PNLDC1	98	84.676	ENSHGLG00000006889	PNLDC1	95	84.676	Heterocephalus_glaber_female
ENSCSAG00000012478	PNLDC1	98	84.676	ENSHGLG00100018275	PNLDC1	95	84.676	Heterocephalus_glaber_male
ENSCSAG00000012478	PNLDC1	97	88.166	ENSSTOG00000005595	PNLDC1	95	88.166	Ictidomys_tridecemlineatus
ENSCSAG00000012478	PNLDC1	99	78.876	ENSJJAG00000009937	Pnldc1	96	78.876	Jaculus_jaculus
ENSCSAG00000012478	PNLDC1	56	85.567	ENSLAFG00000030189	PNLDC1	87	84.564	Loxodonta_africana
ENSCSAG00000012478	PNLDC1	98	98.428	ENSMFAG00000041296	PNLDC1	95	98.428	Macaca_fascicularis
ENSCSAG00000012478	PNLDC1	100	96.604	ENSMMUG00000004181	PNLDC1	100	96.604	Macaca_mulatta
ENSCSAG00000012478	PNLDC1	98	98.428	ENSMNEG00000034271	PNLDC1	95	98.428	Macaca_nemestrina
ENSCSAG00000012478	PNLDC1	98	93.910	ENSMLEG00000044059	PNLDC1	95	93.910	Mandrillus_leucophaeus
ENSCSAG00000012478	PNLDC1	98	57.339	ENSMGAG00000012470	PNLDC1	97	57.339	Meleagris_gallopavo
ENSCSAG00000012478	PNLDC1	97	66.275	ENSMAUG00000012298	Pnldc1	95	66.275	Mesocricetus_auratus
ENSCSAG00000012478	PNLDC1	99	87.016	ENSMICG00000008021	PNLDC1	97	87.016	Microcebus_murinus
ENSCSAG00000012478	PNLDC1	98	84.932	ENSMOCG00000014287	Pnldc1	95	84.932	Microtus_ochrogaster
ENSCSAG00000012478	PNLDC1	97	75.099	ENSMODG00000007420	PNLDC1	94	75.099	Monodelphis_domestica
ENSCSAG00000012478	PNLDC1	98	84.283	MGP_CAROLIEiJ_G0021045	Pnldc1	95	84.283	Mus_caroli
ENSCSAG00000012478	PNLDC1	98	84.676	ENSMUSG00000073460	Pnldc1	92	89.003	Mus_musculus
ENSCSAG00000012478	PNLDC1	98	85.069	MGP_PahariEiJ_G0023361	Pnldc1	95	85.069	Mus_pahari
ENSCSAG00000012478	PNLDC1	98	84.479	MGP_SPRETEiJ_G0021975	Pnldc1	95	84.479	Mus_spretus
ENSCSAG00000012478	PNLDC1	99	85.049	ENSMPUG00000004920	PNLDC1	97	85.049	Mustela_putorius_furo
ENSCSAG00000012478	PNLDC1	97	86.417	ENSMLUG00000000747	PNLDC1	95	86.417	Myotis_lucifugus
ENSCSAG00000012478	PNLDC1	98	86.051	ENSNGAG00000017714	Pnldc1	95	86.051	Nannospalax_galili
ENSCSAG00000012478	PNLDC1	100	94.444	ENSNLEG00000011282	PNLDC1	100	94.444	Nomascus_leucogenys
ENSCSAG00000012478	PNLDC1	62	62.733	ENSMEUG00000011926	-	64	62.733	Notamacropus_eugenii
ENSCSAG00000012478	PNLDC1	55	67.361	ENSMEUG00000014042	-	100	67.361	Notamacropus_eugenii
ENSCSAG00000012478	PNLDC1	71	84.718	ENSOPRG00000003813	PNLDC1	70	84.718	Ochotona_princeps
ENSCSAG00000012478	PNLDC1	98	82.908	ENSODEG00000008047	PNLDC1	95	82.908	Octodon_degus
ENSCSAG00000012478	PNLDC1	96	58.532	ENSOANG00000012199	PNLDC1	95	59.684	Ornithorhynchus_anatinus
ENSCSAG00000012478	PNLDC1	99	85.465	ENSOCUG00000013867	PNLDC1	97	85.465	Oryctolagus_cuniculus
ENSCSAG00000012478	PNLDC1	98	87.938	ENSOGAG00000007331	PNLDC1	97	87.938	Otolemur_garnettii
ENSCSAG00000012478	PNLDC1	99	84.109	ENSOARG00000004585	PNLDC1	97	84.109	Ovis_aries
ENSCSAG00000012478	PNLDC1	98	95.285	ENSPPAG00000026651	PNLDC1	95	95.285	Pan_paniscus
ENSCSAG00000012478	PNLDC1	99	86.628	ENSPPRG00000012854	PNLDC1	97	86.628	Panthera_pardus
ENSCSAG00000012478	PNLDC1	97	85.404	ENSPTIG00000011501	PNLDC1	95	85.404	Panthera_tigris_altaica
ENSCSAG00000012478	PNLDC1	100	95.211	ENSPTRG00000018762	PNLDC1	100	95.211	Pan_troglodytes
ENSCSAG00000012478	PNLDC1	98	98.428	ENSPANG00000022009	PNLDC1	95	98.428	Papio_anubis
ENSCSAG00000012478	PNLDC1	62	55.077	ENSPSIG00000011419	PNLDC1	99	55.077	Pelodiscus_sinensis
ENSCSAG00000012478	PNLDC1	98	85.069	ENSPEMG00000016301	Pnldc1	95	85.069	Peromyscus_maniculatus_bairdii
ENSCSAG00000012478	PNLDC1	84	75.057	ENSPCIG00000023412	PNLDC1	100	75.057	Phascolarctos_cinereus
ENSCSAG00000012478	PNLDC1	98	87.451	ENSPPYG00000017148	PNLDC1	95	87.451	Pongo_abelii
ENSCSAG00000012478	PNLDC1	98	75.049	ENSPCAG00000014169	PNLDC1	96	75.049	Procavia_capensis
ENSCSAG00000012478	PNLDC1	99	87.209	ENSPCOG00000025722	PNLDC1	97	87.209	Propithecus_coquereli
ENSCSAG00000012478	PNLDC1	71	88.919	ENSPVAG00000005325	PNLDC1	69	88.919	Pteropus_vampyrus
ENSCSAG00000012478	PNLDC1	98	84.479	ENSRNOG00000023140	Pnldc1	100	85.000	Rattus_norvegicus
ENSCSAG00000012478	PNLDC1	98	97.446	ENSRBIG00000033806	PNLDC1	95	97.446	Rhinopithecus_bieti
ENSCSAG00000012478	PNLDC1	100	97.510	ENSRROG00000043919	PNLDC1	100	97.510	Rhinopithecus_roxellana
ENSCSAG00000012478	PNLDC1	98	92.927	ENSSBOG00000019135	PNLDC1	95	92.927	Saimiri_boliviensis_boliviensis
ENSCSAG00000012478	PNLDC1	99	74.710	ENSSHAG00000015192	PNLDC1	99	74.710	Sarcophilus_harrisii
ENSCSAG00000012478	PNLDC1	55	65.052	ENSSPUG00000004627	PNLDC1	99	65.625	Sphenodon_punctatus
ENSCSAG00000012478	PNLDC1	99	85.243	ENSSSCG00000004046	PNLDC1	100	85.243	Sus_scrofa
ENSCSAG00000012478	PNLDC1	93	56.674	ENSTGUG00000011418	PNLDC1	99	56.674	Taeniopygia_guttata
ENSCSAG00000012478	PNLDC1	99	77.176	ENSTBEG00000009131	PNLDC1	99	77.176	Tupaia_belangeri
ENSCSAG00000012478	PNLDC1	71	80.593	ENSTTRG00000010409	PNLDC1	69	80.593	Tursiops_truncatus
ENSCSAG00000012478	PNLDC1	99	73.614	ENSUAMG00000015783	PNLDC1	97	73.614	Ursus_americanus
ENSCSAG00000012478	PNLDC1	97	80.000	ENSUMAG00000011903	PNLDC1	99	80.000	Ursus_maritimus
ENSCSAG00000012478	PNLDC1	95	87.500	ENSVVUG00000006586	PNLDC1	99	87.321	Vulpes_vulpes