EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000012654 (Gene tree)
Gene ID: 103230454
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 61164 bases
Position: chr25:45805689-45866852
Accession: 103230454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000008831	EST1	PF10374.9	5e-25	1	1
ENSCSAP00000008831	EST1_DNA_bind	PF10373.9	6e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000010741	SMG7-201	8483	-	ENSCSAP00000008831	1170 (aa)	XP_007987423	A0A0D9RJP2

Gene Model

Click here to download ENSCSAG00000012654's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000012654's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000012654	SMG7	100	99.316	ENSG00000116698	SMG7	100	100.000	Homo_sapiens
ENSCSAG00000012654	SMG7	70	71.861	ENSAPOG00000009611	smg7	94	71.861	Acanthochromis_polyacanthus
ENSCSAG00000012654	SMG7	94	93.188	ENSAMEG00000002357	SMG7	100	93.188	Ailuropoda_melanoleuca
ENSCSAG00000012654	SMG7	95	60.873	ENSACIG00000015152	smg7	100	60.103	Amphilophus_citrinellus
ENSCSAG00000012654	SMG7	97	64.914	ENSAOCG00000013538	smg7	99	65.353	Amphiprion_ocellaris
ENSCSAG00000012654	SMG7	97	64.778	ENSAPEG00000007851	smg7	99	65.217	Amphiprion_percula
ENSCSAG00000012654	SMG7	97	62.469	ENSATEG00000006931	smg7	99	62.960	Anabas_testudineus
ENSCSAG00000012654	SMG7	97	82.293	ENSAPLG00000015811	SMG7	99	82.333	Anas_platyrhynchos
ENSCSAG00000012654	SMG7	97	84.255	ENSACAG00000014989	SMG7	99	84.861	Anolis_carolinensis
ENSCSAG00000012654	SMG7	100	94.901	ENSANAG00000028114	SMG7	100	94.901	Aotus_nancymaae
ENSCSAG00000012654	SMG7	97	64.000	ENSACLG00000022079	smg7	99	64.856	Astatotilapia_calliptera
ENSCSAG00000012654	SMG7	97	67.114	ENSAMXG00000020809	smg7	99	67.393	Astyanax_mexicanus
ENSCSAG00000012654	SMG7	100	96.581	ENSBTAG00000008003	SMG7	100	96.581	Bos_taurus
ENSCSAG00000012654	SMG7	99	98.459	ENSCJAG00000005135	SMG7	100	98.456	Callithrix_jacchus
ENSCSAG00000012654	SMG7	100	97.265	ENSCAFG00000013276	SMG7	100	97.265	Canis_familiaris
ENSCSAG00000012654	SMG7	100	97.265	ENSCAFG00020015475	SMG7	100	97.265	Canis_lupus_dingo
ENSCSAG00000012654	SMG7	97	96.558	ENSCHIG00000018192	SMG7	99	96.558	Capra_hircus
ENSCSAG00000012654	SMG7	100	97.350	ENSTSYG00000002667	SMG7	100	97.350	Carlito_syrichta
ENSCSAG00000012654	SMG7	99	97.599	ENSCPOG00000008906	SMG7	100	97.599	Cavia_porcellus
ENSCSAG00000012654	SMG7	94	94.672	ENSCCAG00000028596	SMG7	100	94.672	Cebus_capucinus
ENSCSAG00000012654	SMG7	100	99.829	ENSCATG00000011063	SMG7	100	99.829	Cercocebus_atys
ENSCSAG00000012654	SMG7	100	97.265	ENSCLAG00000010751	SMG7	100	97.265	Chinchilla_lanigera
ENSCSAG00000012654	SMG7	89	89.398	ENSCHOG00000010522	SMG7	93	89.780	Choloepus_hoffmanni
ENSCSAG00000012654	SMG7	97	88.543	ENSCPBG00000015724	SMG7	99	88.374	Chrysemys_picta_bellii
ENSCSAG00000012654	SMG7	94	95.721	ENSCANG00000015680	SMG7	100	95.721	Colobus_angolensis_palliatus
ENSCSAG00000012654	SMG7	99	96.141	ENSCGRG00001013705	Smg7	100	96.141	Cricetulus_griseus_chok1gshd
ENSCSAG00000012654	SMG7	98	96.084	ENSCGRG00000018401	Smg7	100	96.084	Cricetulus_griseus_crigri
ENSCSAG00000012654	SMG7	93	69.500	ENSCVAG00000011842	smg7	99	69.500	Cyprinodon_variegatus
ENSCSAG00000012654	SMG7	97	66.473	ENSDARG00000060767	smg7	99	66.556	Danio_rerio
ENSCSAG00000012654	SMG7	98	96.606	ENSDORG00000007331	Smg7	100	96.606	Dipodomys_ordii
ENSCSAG00000012654	SMG7	94	95.985	ENSETEG00000002654	SMG7	99	95.985	Echinops_telfairi
ENSCSAG00000012654	SMG7	100	97.778	ENSEASG00005006524	SMG7	100	97.778	Equus_asinus_asinus
ENSCSAG00000012654	SMG7	100	97.863	ENSECAG00000004313	SMG7	100	97.863	Equus_caballus
ENSCSAG00000012654	SMG7	93	96.679	ENSEEUG00000002024	SMG7	92	96.679	Erinaceus_europaeus
ENSCSAG00000012654	SMG7	97	64.774	ENSELUG00000010293	smg7	99	65.185	Esox_lucius
ENSCSAG00000012654	SMG7	99	97.519	ENSFCAG00000010900	SMG7	100	97.519	Felis_catus
ENSCSAG00000012654	SMG7	96	83.248	ENSFALG00000003047	SMG7	100	83.163	Ficedula_albicollis
ENSCSAG00000012654	SMG7	97	97.259	ENSFDAG00000012121	SMG7	99	97.148	Fukomys_damarensis
ENSCSAG00000012654	SMG7	97	60.996	ENSFHEG00000011073	smg7	99	60.576	Fundulus_heteroclitus
ENSCSAG00000012654	SMG7	87	66.860	ENSGMOG00000004916	smg7	92	66.860	Gadus_morhua
ENSCSAG00000012654	SMG7	97	82.378	ENSGALG00000004667	SMG7	99	82.209	Gallus_gallus
ENSCSAG00000012654	SMG7	97	60.848	ENSGAFG00000019000	smg7	99	60.349	Gambusia_affinis
ENSCSAG00000012654	SMG7	94	64.680	ENSGACG00000001634	smg7	99	65.149	Gasterosteus_aculeatus
ENSCSAG00000012654	SMG7	100	99.145	ENSGGOG00000002342	SMG7	100	99.145	Gorilla_gorilla
ENSCSAG00000012654	SMG7	97	64.580	ENSHBUG00000003726	smg7	97	73.096	Haplochromis_burtoni
ENSCSAG00000012654	SMG7	96	97.237	ENSHGLG00000009353	SMG7	100	97.237	Heterocephalus_glaber_female
ENSCSAG00000012654	SMG7	96	95.544	ENSHGLG00100009637	-	100	95.544	Heterocephalus_glaber_male
ENSCSAG00000012654	SMG7	97	89.056	ENSHGLG00100004878	-	99	89.056	Heterocephalus_glaber_male
ENSCSAG00000012654	SMG7	97	67.929	ENSIPUG00000016997	smg7	99	67.929	Ictalurus_punctatus
ENSCSAG00000012654	SMG7	98	98.172	ENSSTOG00000000401	SMG7	100	98.172	Ictidomys_tridecemlineatus
ENSCSAG00000012654	SMG7	97	95.410	ENSJJAG00000012351	Smg7	99	95.410	Jaculus_jaculus
ENSCSAG00000012654	SMG7	87	71.000	ENSKMAG00000004900	smg7	97	71.000	Kryptolebias_marmoratus
ENSCSAG00000012654	SMG7	97	62.978	ENSLBEG00000002983	smg7	99	62.895	Labrus_bergylta
ENSCSAG00000012654	SMG7	97	75.694	ENSLACG00000000972	SMG7	99	75.673	Latimeria_chalumnae
ENSCSAG00000012654	SMG7	97	67.559	ENSLOCG00000002010	smg7	99	67.809	Lepisosteus_oculatus
ENSCSAG00000012654	SMG7	98	97.215	ENSLAFG00000008186	SMG7	100	97.215	Loxodonta_africana
ENSCSAG00000012654	SMG7	100	99.744	ENSMFAG00000031653	SMG7	100	99.744	Macaca_fascicularis
ENSCSAG00000012654	SMG7	100	99.829	ENSMMUG00000018458	SMG7	100	99.829	Macaca_mulatta
ENSCSAG00000012654	SMG7	94	95.808	ENSMNEG00000034798	SMG7	100	95.808	Macaca_nemestrina
ENSCSAG00000012654	SMG7	100	99.829	ENSMLEG00000037170	SMG7	100	99.829	Mandrillus_leucophaeus
ENSCSAG00000012654	SMG7	85	64.000	ENSMAMG00000018733	smg7	84	66.102	Mastacembelus_armatus
ENSCSAG00000012654	SMG7	97	64.450	ENSMZEG00005015247	smg7	99	64.450	Maylandia_zebra
ENSCSAG00000012654	SMG7	95	81.919	ENSMGAG00000001561	SMG7	98	81.748	Meleagris_gallopavo
ENSCSAG00000012654	SMG7	98	96.519	ENSMAUG00000019484	Smg7	100	96.519	Mesocricetus_auratus
ENSCSAG00000012654	SMG7	98	98.172	ENSMICG00000007145	SMG7	100	98.172	Microcebus_murinus
ENSCSAG00000012654	SMG7	98	96.345	ENSMOCG00000020748	Smg7	100	96.345	Microtus_ochrogaster
ENSCSAG00000012654	SMG7	97	60.384	ENSMMOG00000001524	smg7	99	60.750	Mola_mola
ENSCSAG00000012654	SMG7	90	85.273	ENSMODG00000007139	SMG7	99	85.273	Monodelphis_domestica
ENSCSAG00000012654	SMG7	96	68.657	ENSMALG00000000061	smg7	95	68.657	Monopterus_albus
ENSCSAG00000012654	SMG7	98	96.084	MGP_CAROLIEiJ_G0014704	Smg7	100	95.735	Mus_caroli
ENSCSAG00000012654	SMG7	98	95.997	ENSMUSG00000042772	Smg7	100	95.997	Mus_musculus
ENSCSAG00000012654	SMG7	98	96.171	MGP_PahariEiJ_G0027940	Smg7	100	96.171	Mus_pahari
ENSCSAG00000012654	SMG7	98	96.084	MGP_SPRETEiJ_G0015511	Smg7	100	96.084	Mus_spretus
ENSCSAG00000012654	SMG7	96	97.237	ENSMPUG00000011732	SMG7	97	97.237	Mustela_putorius_furo
ENSCSAG00000012654	SMG7	97	96.646	ENSMLUG00000015417	SMG7	99	96.646	Myotis_lucifugus
ENSCSAG00000012654	SMG7	98	96.519	ENSNGAG00000009836	Smg7	100	96.519	Nannospalax_galili
ENSCSAG00000012654	SMG7	96	57.908	ENSNBRG00000024343	smg7	98	70.952	Neolamprologus_brichardi
ENSCSAG00000012654	SMG7	100	99.487	ENSNLEG00000018018	SMG7	100	99.487	Nomascus_leucogenys
ENSCSAG00000012654	SMG7	75	86.563	ENSMEUG00000004681	SMG7	77	86.750	Notamacropus_eugenii
ENSCSAG00000012654	SMG7	94	84.932	ENSOPRG00000013942	SMG7	96	84.749	Ochotona_princeps
ENSCSAG00000012654	SMG7	98	97.302	ENSODEG00000010390	SMG7	100	97.302	Octodon_degus
ENSCSAG00000012654	SMG7	97	61.406	ENSONIG00000000277	smg7	99	62.325	Oreochromis_niloticus
ENSCSAG00000012654	SMG7	96	91.046	ENSOANG00000000994	SMG7	100	90.957	Ornithorhynchus_anatinus
ENSCSAG00000012654	SMG7	100	89.658	ENSOCUG00000005887	SMG7	95	89.829	Oryctolagus_cuniculus
ENSCSAG00000012654	SMG7	97	62.313	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSCSAG00000012654	SMG7	97	62.895	ENSORLG00020015779	smg7	70	92.763	Oryzias_latipes_hni
ENSCSAG00000012654	SMG7	97	64.858	ENSORLG00015012289	smg7	99	62.521	Oryzias_latipes_hsok
ENSCSAG00000012654	SMG7	97	62.769	ENSOMEG00000002328	smg7	99	62.687	Oryzias_melastigma
ENSCSAG00000012654	SMG7	94	96.442	ENSOGAG00000003107	SMG7	93	96.350	Otolemur_garnettii
ENSCSAG00000012654	SMG7	100	96.410	ENSOARG00000001352	SMG7	100	96.410	Ovis_aries
ENSCSAG00000012654	SMG7	94	95.459	ENSPPAG00000031619	SMG7	100	95.459	Pan_paniscus
ENSCSAG00000012654	SMG7	99	97.690	ENSPPRG00000011222	SMG7	100	97.690	Panthera_pardus
ENSCSAG00000012654	SMG7	94	97.628	ENSPTIG00000007242	SMG7	100	93.712	Panthera_tigris_altaica
ENSCSAG00000012654	SMG7	94	99.361	ENSPTRG00000001764	SMG7	100	95.459	Pan_troglodytes
ENSCSAG00000012654	SMG7	100	99.829	ENSPANG00000004520	SMG7	100	99.829	Papio_anubis
ENSCSAG00000012654	SMG7	97	64.388	ENSPKIG00000007242	smg7	99	68.500	Paramormyrops_kingsleyae
ENSCSAG00000012654	SMG7	97	91.821	ENSPSIG00000012201	SMG7	99	91.557	Pelodiscus_sinensis
ENSCSAG00000012654	SMG7	54	57.000	ENSPMGG00000021833	smg7	89	57.500	Periophthalmus_magnuspinnatus
ENSCSAG00000012654	SMG7	98	95.213	ENSPEMG00000011315	Smg7	100	95.213	Peromyscus_maniculatus_bairdii
ENSCSAG00000012654	SMG7	97	90.169	ENSPCIG00000003786	SMG7	99	91.919	Phascolarctos_cinereus
ENSCSAG00000012654	SMG7	97	63.079	ENSPFOG00000019219	smg7	99	63.193	Poecilia_formosa
ENSCSAG00000012654	SMG7	97	60.963	ENSPLAG00000001446	smg7	99	60.797	Poecilia_latipinna
ENSCSAG00000012654	SMG7	94	60.154	ENSPMEG00000005218	smg7	99	59.983	Poecilia_mexicana
ENSCSAG00000012654	SMG7	85	60.170	ENSPREG00000019039	smg7	92	60.208	Poecilia_reticulata
ENSCSAG00000012654	SMG7	97	91.349	ENSPPYG00000000427	SMG7	99	91.349	Pongo_abelii
ENSCSAG00000012654	SMG7	93	85.609	ENSPCAG00000008360	SMG7	94	85.609	Procavia_capensis
ENSCSAG00000012654	SMG7	100	98.120	ENSPCOG00000011996	SMG7	100	98.120	Propithecus_coquereli
ENSCSAG00000012654	SMG7	89	91.635	ENSPVAG00000000851	SMG7	89	91.635	Pteropus_vampyrus
ENSCSAG00000012654	SMG7	97	64.439	ENSPNYG00000007643	smg7	99	64.633	Pundamilia_nyererei
ENSCSAG00000012654	SMG7	97	67.055	ENSPNAG00000011374	smg7	98	70.202	Pygocentrus_nattereri
ENSCSAG00000012654	SMG7	99	95.887	ENSRNOG00000027962	Smg7	100	96.296	Rattus_norvegicus
ENSCSAG00000012654	SMG7	100	99.658	ENSRBIG00000036316	SMG7	100	99.658	Rhinopithecus_bieti
ENSCSAG00000012654	SMG7	100	99.658	ENSRROG00000035719	SMG7	100	99.658	Rhinopithecus_roxellana
ENSCSAG00000012654	SMG7	97	98.500	ENSSBOG00000023454	SMG7	99	98.500	Saimiri_boliviensis_boliviensis
ENSCSAG00000012654	SMG7	97	85.775	ENSSHAG00000013147	SMG7	99	85.521	Sarcophilus_harrisii
ENSCSAG00000012654	SMG7	89	76.316	ENSSFOG00015017252	smg7	99	76.316	Scleropages_formosus
ENSCSAG00000012654	SMG7	97	64.789	ENSSMAG00000006067	smg7	99	64.764	Scophthalmus_maximus
ENSCSAG00000012654	SMG7	93	71.766	ENSSDUG00000017543	smg7	99	62.189	Seriola_dumerili
ENSCSAG00000012654	SMG7	97	82.941	ENSSPUG00000002064	SMG7	99	82.773	Sphenodon_punctatus
ENSCSAG00000012654	SMG7	96	62.468	ENSSPAG00000008733	smg7	98	62.395	Stegastes_partitus
ENSCSAG00000012654	SMG7	100	97.521	ENSSSCG00000015558	SMG7	100	97.521	Sus_scrofa
ENSCSAG00000012654	SMG7	97	82.278	ENSTGUG00000003928	SMG7	100	82.194	Taeniopygia_guttata
ENSCSAG00000012654	SMG7	97	63.735	ENSTNIG00000002802	smg7	99	63.697	Tetraodon_nigroviridis
ENSCSAG00000012654	SMG7	75	97.034	ENSTBEG00000003220	SMG7	75	97.034	Tupaia_belangeri
ENSCSAG00000012654	SMG7	94	97.443	ENSTTRG00000014778	SMG7	94	97.443	Tursiops_truncatus
ENSCSAG00000012654	SMG7	94	92.994	ENSUAMG00000017473	SMG7	100	92.994	Ursus_americanus
ENSCSAG00000012654	SMG7	94	97.361	ENSUMAG00000016389	SMG7	100	97.361	Ursus_maritimus
ENSCSAG00000012654	SMG7	100	97.350	ENSVVUG00000008976	SMG7	100	97.350	Vulpes_vulpes
ENSCSAG00000012654	SMG7	97	66.444	ENSXETG00000012528	smg7	99	66.415	Xenopus_tropicalis
ENSCSAG00000012654	SMG7	97	60.596	ENSXMAG00000007123	smg7	99	60.762	Xiphophorus_maculatus