EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000012712 (Gene tree)
Gene ID: 103237146
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 91411 bases
Position: chr8:89351415-89442825
Accession: 103237146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000008856	ResIII	PF04851.15	5.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000010765	-	2727	XM_008001107	ENSCSAP00000008856	908 (aa)	XP_007999297	A0A0D9RJR7

Gene Model

Click here to download ENSCSAG00000012712's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000012712's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000012712	-	55	31.518	ENSCSAG00000018386	CHD1L	50	31.518
ENSCSAG00000012712	-	54	32.827	ENSCSAG00000004186	SMARCAD1	59	32.827
ENSCSAG00000012712	-	71	43.741	ENSCSAG00000001229	RAD54L	84	43.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000012712	-	80	98.209	ENSG00000265817	FSBP	100	98.209	Homo_sapiens
ENSCSAG00000012712	-	100	97.143	ENSG00000197275	RAD54B	100	97.143	Homo_sapiens
ENSCSAG00000012712	-	99	86.703	ENSAMEG00000005834	-	99	86.703	Ailuropoda_melanoleuca
ENSCSAG00000012712	-	99	54.645	ENSACIG00000013005	rad54b	99	54.645	Amphilophus_citrinellus
ENSCSAG00000012712	-	99	54.420	ENSAOCG00000008523	rad54b	99	54.420	Amphiprion_ocellaris
ENSCSAG00000012712	-	99	54.934	ENSAPEG00000001673	rad54b	99	55.044	Amphiprion_percula
ENSCSAG00000012712	-	99	54.208	ENSATEG00000001527	rad54b	99	54.208	Anabas_testudineus
ENSCSAG00000012712	-	99	69.365	ENSAPLG00000014366	-	99	69.365	Anas_platyrhynchos
ENSCSAG00000012712	-	87	71.106	ENSACAG00000003671	-	99	71.106	Anolis_carolinensis
ENSCSAG00000012712	-	71	94.444	ENSANAG00000019528	-	100	94.444	Aotus_nancymaae
ENSCSAG00000012712	-	99	54.655	ENSACLG00000007826	rad54b	99	54.655	Astatotilapia_calliptera
ENSCSAG00000012712	-	85	58.142	ENSAMXG00000039985	rad54b	94	57.881	Astyanax_mexicanus
ENSCSAG00000012712	-	99	85.242	ENSBTAG00000000632	RAD54B	99	85.242	Bos_taurus
ENSCSAG00000012712	-	79	35.475	WBGene00013792	Y116A8C.13	98	33.487	Caenorhabditis_elegans
ENSCSAG00000012712	-	100	94.066	ENSCJAG00000000080	-	100	95.724	Callithrix_jacchus
ENSCSAG00000012712	-	99	85.165	ENSCAFG00000009179	RAD54B	99	85.165	Canis_familiaris
ENSCSAG00000012712	-	99	85.055	ENSCAFG00020012084	-	99	85.055	Canis_lupus_dingo
ENSCSAG00000012712	-	99	84.802	ENSCHIG00000008230	-	99	84.802	Capra_hircus
ENSCSAG00000012712	-	99	89.329	ENSTSYG00000013234	-	99	89.329	Carlito_syrichta
ENSCSAG00000012712	-	99	83.921	ENSCPOG00000011643	-	99	83.921	Cavia_porcellus
ENSCSAG00000012712	-	100	94.176	ENSCCAG00000011754	-	100	95.586	Cebus_capucinus
ENSCSAG00000012712	-	100	99.009	ENSCATG00000030661	-	100	99.448	Cercocebus_atys
ENSCSAG00000012712	-	100	84.303	ENSCLAG00000010476	-	100	84.303	Chinchilla_lanigera
ENSCSAG00000012712	-	100	70.575	ENSCPBG00000003204	-	99	70.575	Chrysemys_picta_bellii
ENSCSAG00000012712	-	100	98.789	ENSCANG00000017939	-	100	99.033	Colobus_angolensis_palliatus
ENSCSAG00000012712	-	99	79.846	ENSCGRG00001020184	Rad54b	99	79.846	Cricetulus_griseus_chok1gshd
ENSCSAG00000012712	-	99	78.414	ENSCGRG00000016752	Rad54b	99	78.414	Cricetulus_griseus_crigri
ENSCSAG00000012712	-	93	61.538	ENSCSEG00000001601	rad54b	95	57.230	Cynoglossus_semilaevis
ENSCSAG00000012712	-	99	55.895	ENSCVAG00000009200	rad54b	99	55.895	Cyprinodon_variegatus
ENSCSAG00000012712	-	99	53.108	ENSDARG00000092134	rad54b	99	60.555	Danio_rerio
ENSCSAG00000012712	-	99	84.539	ENSDNOG00000015535	-	99	84.539	Dasypus_novemcinctus
ENSCSAG00000012712	-	99	84.176	ENSDORG00000002492	Rad54b	99	84.176	Dipodomys_ordii
ENSCSAG00000012712	-	87	81.369	ENSETEG00000010605	-	100	81.369	Echinops_telfairi
ENSCSAG00000012712	-	99	46.818	ENSEBUG00000009104	rad54b	98	46.587	Eptatretus_burgeri
ENSCSAG00000012712	-	97	86.070	ENSEASG00005004021	-	99	86.070	Equus_asinus_asinus
ENSCSAG00000012712	-	99	86.703	ENSECAG00000021949	-	99	86.703	Equus_caballus
ENSCSAG00000012712	-	83	81.761	ENSEEUG00000008056	-	83	81.761	Erinaceus_europaeus
ENSCSAG00000012712	-	99	53.635	ENSELUG00000009287	rad54b	99	53.846	Esox_lucius
ENSCSAG00000012712	-	99	86.469	ENSFCAG00000015513	-	99	89.779	Felis_catus
ENSCSAG00000012712	-	99	68.913	ENSFALG00000005467	-	99	68.913	Ficedula_albicollis
ENSCSAG00000012712	-	99	85.039	ENSFDAG00000020541	-	100	85.039	Fukomys_damarensis
ENSCSAG00000012712	-	86	58.365	ENSFHEG00000014382	rad54b	87	58.491	Fundulus_heteroclitus
ENSCSAG00000012712	-	86	56.407	ENSGMOG00000014774	rad54b	98	56.407	Gadus_morhua
ENSCSAG00000012712	-	100	68.364	ENSGALG00000043597	RAD54B	99	68.364	Gallus_gallus
ENSCSAG00000012712	-	99	54.002	ENSGAFG00000007901	rad54b	99	54.216	Gambusia_affinis
ENSCSAG00000012712	-	99	54.800	ENSGACG00000009128	rad54b	99	54.800	Gasterosteus_aculeatus
ENSCSAG00000012712	-	100	70.185	ENSGAGG00000018747	-	99	70.185	Gopherus_agassizii
ENSCSAG00000012712	-	99	96.920	ENSGGOG00000023516	-	99	96.920	Gorilla_gorilla
ENSCSAG00000012712	-	99	53.426	ENSHBUG00000016017	rad54b	99	53.426	Haplochromis_burtoni
ENSCSAG00000012712	-	99	83.607	ENSHGLG00000008263	RAD54B	99	83.607	Heterocephalus_glaber_female
ENSCSAG00000012712	-	99	82.845	ENSHGLG00100008108	-	99	82.845	Heterocephalus_glaber_male
ENSCSAG00000012712	-	99	53.326	ENSHCOG00000004764	rad54b	98	55.748	Hippocampus_comes
ENSCSAG00000012712	-	99	52.816	ENSIPUG00000018531	rad54b	99	52.816	Ictalurus_punctatus
ENSCSAG00000012712	-	99	84.437	ENSSTOG00000010791	-	99	84.437	Ictidomys_tridecemlineatus
ENSCSAG00000012712	-	99	81.938	ENSJJAG00000010314	Rad54b	99	81.938	Jaculus_jaculus
ENSCSAG00000012712	-	99	53.115	ENSKMAG00000004744	rad54b	99	53.115	Kryptolebias_marmoratus
ENSCSAG00000012712	-	82	70.053	ENSLACG00000000859	-	100	70.053	Latimeria_chalumnae
ENSCSAG00000012712	-	99	58.017	ENSLOCG00000010100	rad54b	97	62.515	Lepisosteus_oculatus
ENSCSAG00000012712	-	89	84.777	ENSLAFG00000015315	-	100	84.777	Loxodonta_africana
ENSCSAG00000012712	-	100	98.899	ENSMFAG00000031629	-	100	99.171	Macaca_fascicularis
ENSCSAG00000012712	-	100	98.899	ENSMMUG00000005659	-	100	98.899	Macaca_mulatta
ENSCSAG00000012712	-	100	98.789	ENSMNEG00000016408	-	100	98.789	Macaca_nemestrina
ENSCSAG00000012712	-	100	99.119	ENSMLEG00000006946	-	100	99.119	Mandrillus_leucophaeus
ENSCSAG00000012712	-	99	55.217	ENSMAMG00000012269	rad54b	99	55.217	Mastacembelus_armatus
ENSCSAG00000012712	-	99	53.640	ENSMZEG00005005281	rad54b	95	59.039	Maylandia_zebra
ENSCSAG00000012712	-	100	68.512	ENSMGAG00000012024	-	99	68.512	Meleagris_gallopavo
ENSCSAG00000012712	-	99	79.736	ENSMAUG00000013586	Rad54b	99	79.736	Mesocricetus_auratus
ENSCSAG00000012712	-	99	84.598	ENSMICG00000000754	-	99	84.598	Microcebus_murinus
ENSCSAG00000012712	-	99	77.473	ENSMOCG00000020035	Rad54b	99	77.692	Microtus_ochrogaster
ENSCSAG00000012712	-	99	53.922	ENSMMOG00000003394	rad54b	99	53.922	Mola_mola
ENSCSAG00000012712	-	88	77.500	ENSMODG00000007343	-	99	77.500	Monodelphis_domestica
ENSCSAG00000012712	-	71	58.787	ENSMALG00000001520	rad54b	99	58.787	Monopterus_albus
ENSCSAG00000012712	-	99	78.218	MGP_CAROLIEiJ_G0025810	Rad54b	99	78.218	Mus_caroli
ENSCSAG00000012712	-	99	78.194	ENSMUSG00000078773	Rad54b	99	78.194	Mus_musculus
ENSCSAG00000012712	-	99	78.658	MGP_PahariEiJ_G0023933	Rad54b	99	78.658	Mus_pahari
ENSCSAG00000012712	-	99	78.524	MGP_SPRETEiJ_G0026758	Rad54b	99	78.524	Mus_spretus
ENSCSAG00000012712	-	89	87.268	ENSMPUG00000008878	-	99	87.268	Mustela_putorius_furo
ENSCSAG00000012712	-	100	84.430	ENSMLUG00000008953	-	100	84.430	Myotis_lucifugus
ENSCSAG00000012712	-	99	82.932	ENSNGAG00000017537	Rad54b	99	82.932	Nannospalax_galili
ENSCSAG00000012712	-	87	58.794	ENSNBRG00000013394	rad54b	92	58.794	Neolamprologus_brichardi
ENSCSAG00000012712	-	100	97.143	ENSNLEG00000003062	-	99	97.934	Nomascus_leucogenys
ENSCSAG00000012712	-	71	76.190	ENSMEUG00000012426	-	71	76.190	Notamacropus_eugenii
ENSCSAG00000012712	-	99	83.590	ENSODEG00000019564	-	99	83.590	Octodon_degus
ENSCSAG00000012712	-	78	86.708	ENSODEG00000002650	-	95	86.708	Octodon_degus
ENSCSAG00000012712	-	99	54.713	ENSONIG00000006067	rad54b	99	54.713	Oreochromis_niloticus
ENSCSAG00000012712	-	82	77.364	ENSOANG00000011348	-	99	77.364	Ornithorhynchus_anatinus
ENSCSAG00000012712	-	99	85.275	ENSOCUG00000016478	-	99	85.275	Oryctolagus_cuniculus
ENSCSAG00000012712	-	99	54.526	ENSORLG00000008918	rad54b	99	62.074	Oryzias_latipes
ENSCSAG00000012712	-	71	62.229	ENSORLG00020012171	rad54b	99	62.229	Oryzias_latipes_hni
ENSCSAG00000012712	-	99	54.382	ENSORLG00015018536	rad54b	99	54.382	Oryzias_latipes_hsok
ENSCSAG00000012712	-	84	59.073	ENSOMEG00000004345	rad54b	99	59.073	Oryzias_melastigma
ENSCSAG00000012712	-	99	86.484	ENSOGAG00000007854	-	99	86.484	Otolemur_garnettii
ENSCSAG00000012712	-	89	86.914	ENSOARG00000007691	-	99	86.914	Ovis_aries
ENSCSAG00000012712	-	100	95.275	ENSPPAG00000029572	-	100	95.275	Pan_paniscus
ENSCSAG00000012712	-	99	86.689	ENSPPRG00000007571	-	99	89.917	Panthera_pardus
ENSCSAG00000012712	-	80	89.917	ENSPTIG00000012670	-	99	89.917	Panthera_tigris_altaica
ENSCSAG00000012712	-	100	97.143	ENSPTRG00000020427	-	100	98.209	Pan_troglodytes
ENSCSAG00000012712	-	100	99.229	ENSPANG00000019566	-	100	99.229	Papio_anubis
ENSCSAG00000012712	-	99	58.388	ENSPKIG00000014974	rad54b	99	58.388	Paramormyrops_kingsleyae
ENSCSAG00000012712	-	100	69.381	ENSPSIG00000002383	-	99	72.917	Pelodiscus_sinensis
ENSCSAG00000012712	-	99	79.978	ENSPEMG00000012133	Rad54b	99	79.978	Peromyscus_maniculatus_bairdii
ENSCSAG00000012712	-	87	58.302	ENSPMAG00000002916	rad54b	99	58.552	Petromyzon_marinus
ENSCSAG00000012712	-	89	77.805	ENSPCIG00000020151	-	94	77.805	Phascolarctos_cinereus
ENSCSAG00000012712	-	99	54.846	ENSPFOG00000023411	rad54b	99	54.846	Poecilia_formosa
ENSCSAG00000012712	-	99	54.952	ENSPLAG00000010430	rad54b	99	54.952	Poecilia_latipinna
ENSCSAG00000012712	-	99	54.846	ENSPMEG00000016873	rad54b	95	59.113	Poecilia_mexicana
ENSCSAG00000012712	-	99	55.398	ENSPREG00000018443	rad54b	99	55.398	Poecilia_reticulata
ENSCSAG00000012712	-	100	96.923	ENSPPYG00000018750	-	100	96.923	Pongo_abelii
ENSCSAG00000012712	-	99	90.110	ENSPCOG00000026845	-	99	91.172	Propithecus_coquereli
ENSCSAG00000012712	-	87	89.744	ENSPVAG00000000261	-	92	89.744	Pteropus_vampyrus
ENSCSAG00000012712	-	86	58.682	ENSPNYG00000018303	rad54b	96	58.756	Pundamilia_nyererei
ENSCSAG00000012712	-	100	54.252	ENSPNAG00000000295	rad54b	96	76.923	Pygocentrus_nattereri
ENSCSAG00000012712	-	99	75.881	ENSRNOG00000039949	Rad54b	99	75.881	Rattus_norvegicus
ENSCSAG00000012712	-	100	98.128	ENSRBIG00000020419	-	100	98.128	Rhinopithecus_bieti
ENSCSAG00000012712	-	100	98.128	ENSRROG00000039897	-	100	98.128	Rhinopithecus_roxellana
ENSCSAG00000012712	-	81	36.900	YBR073W	RDH54	82	37.500	Saccharomyces_cerevisiae
ENSCSAG00000012712	-	100	93.956	ENSSBOG00000028501	-	100	93.956	Saimiri_boliviensis_boliviensis
ENSCSAG00000012712	-	99	74.863	ENSSHAG00000017038	-	99	74.863	Sarcophilus_harrisii
ENSCSAG00000012712	-	63	65.026	ENSSFOG00015008483	rad54b	88	65.026	Scleropages_formosus
ENSCSAG00000012712	-	99	53.165	ENSSMAG00000018659	rad54b	99	53.474	Scophthalmus_maximus
ENSCSAG00000012712	-	99	53.797	ENSSDUG00000001122	rad54b	98	54.034	Seriola_dumerili
ENSCSAG00000012712	-	99	53.676	ENSSLDG00000013787	rad54b	99	53.895	Seriola_lalandi_dorsalis
ENSCSAG00000012712	-	100	68.271	ENSSPUG00000016497	-	99	68.271	Sphenodon_punctatus
ENSCSAG00000012712	-	99	55.349	ENSSPAG00000012800	rad54b	99	55.349	Stegastes_partitus
ENSCSAG00000012712	-	100	84.818	ENSSSCG00000006101	-	99	88.110	Sus_scrofa
ENSCSAG00000012712	-	99	68.182	ENSTGUG00000011880	-	99	68.182	Taeniopygia_guttata
ENSCSAG00000012712	-	99	52.743	ENSTRUG00000010015	rad54b	99	52.954	Takifugu_rubripes
ENSCSAG00000012712	-	99	83.700	ENSTTRG00000006312	-	99	83.700	Tursiops_truncatus
ENSCSAG00000012712	-	99	86.813	ENSUMAG00000016401	-	99	86.813	Ursus_maritimus
ENSCSAG00000012712	-	99	84.234	ENSVPAG00000003157	-	99	84.234	Vicugna_pacos
ENSCSAG00000012712	-	99	54.595	ENSXETG00000025924	rad54b	99	59.625	Xenopus_tropicalis
ENSCSAG00000012712	-	99	54.705	ENSXMAG00000013141	rad54b	99	54.705	Xiphophorus_maculatus