EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000013109 (Gene tree)
Gene ID: 103237915
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 46417 bases
Position: chr9:13606433-13652849
Accession: 103237915
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000009286	PRP4	PF08799.11	7.1e-14	1	1
ENSCSAP00000009286	Prp18	PF02840.15	3.9e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000011205	-	3849	-	ENSCSAP00000009286	351 (aa)	XP_008000509	A0A0D9RKZ7

Gene Model

Click here to download ENSCSAG00000013109's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000013109's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000013109	-	100	97.436	ENSG00000165630	PRPF18	100	97.436	Homo_sapiens
ENSCSAG00000013109	-	100	84.046	ENSAPOG00000024177	prpf18	100	84.046	Acanthochromis_polyacanthus
ENSCSAG00000013109	-	100	96.866	ENSAMEG00000013591	-	100	96.866	Ailuropoda_melanoleuca
ENSCSAG00000013109	-	100	82.336	ENSACIG00000001186	prpf18	100	82.336	Amphilophus_citrinellus
ENSCSAG00000013109	-	98	84.012	ENSAOCG00000006572	prpf18	94	83.965	Amphiprion_ocellaris
ENSCSAG00000013109	-	100	84.330	ENSAPEG00000004564	prpf18	100	84.330	Amphiprion_percula
ENSCSAG00000013109	-	100	82.051	ENSATEG00000000303	prpf18	100	82.051	Anabas_testudineus
ENSCSAG00000013109	-	99	89.112	ENSAPLG00000003387	-	99	89.112	Anas_platyrhynchos
ENSCSAG00000013109	-	100	90.652	ENSACAG00000000818	-	100	91.218	Anolis_carolinensis
ENSCSAG00000013109	-	100	99.430	ENSANAG00000037445	-	100	99.430	Aotus_nancymaae
ENSCSAG00000013109	-	100	82.906	ENSACLG00000026296	prpf18	100	82.906	Astatotilapia_calliptera
ENSCSAG00000013109	-	100	84.330	ENSAMXG00000012848	prpf18	100	84.330	Astyanax_mexicanus
ENSCSAG00000013109	-	100	99.145	ENSBTAG00000017244	PRPF18	100	99.145	Bos_taurus
ENSCSAG00000013109	-	98	37.535	WBGene00009320	F32B6.3	97	37.535	Caenorhabditis_elegans
ENSCSAG00000013109	-	100	99.430	ENSCJAG00000009432	-	100	99.430	Callithrix_jacchus
ENSCSAG00000013109	-	100	96.866	ENSCAFG00000004735	-	100	96.866	Canis_familiaris
ENSCSAG00000013109	-	100	96.866	ENSCAFG00020007712	-	100	96.866	Canis_lupus_dingo
ENSCSAG00000013109	-	100	99.145	ENSCHIG00000000499	-	100	99.145	Capra_hircus
ENSCSAG00000013109	-	100	99.145	ENSTSYG00000003517	-	100	99.145	Carlito_syrichta
ENSCSAG00000013109	-	100	99.715	ENSCPOG00000021069	-	100	99.715	Cavia_porcellus
ENSCSAG00000013109	-	100	99.430	ENSCCAG00000036822	-	100	99.430	Cebus_capucinus
ENSCSAG00000013109	-	100	86.610	ENSCATG00000016633	-	100	86.610	Cercocebus_atys
ENSCSAG00000013109	-	100	98.860	ENSCLAG00000011770	-	100	98.860	Chinchilla_lanigera
ENSCSAG00000013109	-	100	89.041	ENSCPBG00000003100	-	100	89.589	Chrysemys_picta_bellii
ENSCSAG00000013109	-	99	52.661	ENSCING00000020481	-	97	52.101	Ciona_intestinalis
ENSCSAG00000013109	-	99	52.991	ENSCSAVG00000010546	-	99	52.422	Ciona_savignyi
ENSCSAG00000013109	-	100	99.715	ENSCANG00000034900	-	100	99.715	Colobus_angolensis_palliatus
ENSCSAG00000013109	-	100	96.866	ENSCGRG00001023665	Prpf18	100	96.866	Cricetulus_griseus_chok1gshd
ENSCSAG00000013109	-	100	96.866	ENSCGRG00000014690	Prpf18	100	96.866	Cricetulus_griseus_crigri
ENSCSAG00000013109	-	100	81.481	ENSCSEG00000005536	prpf18	99	81.481	Cynoglossus_semilaevis
ENSCSAG00000013109	-	100	82.906	ENSCVAG00000012401	prpf18	100	82.906	Cyprinodon_variegatus
ENSCSAG00000013109	-	100	84.046	ENSDARG00000058306	prpf18	100	84.046	Danio_rerio
ENSCSAG00000013109	-	100	96.296	ENSDNOG00000035607	-	100	96.296	Dasypus_novemcinctus
ENSCSAG00000013109	-	100	96.581	ENSDORG00000000858	Prpf18	100	96.581	Dipodomys_ordii
ENSCSAG00000013109	-	99	49.713	FBgn0027784	Prp18	98	49.713	Drosophila_melanogaster
ENSCSAG00000013109	-	100	85.470	ENSETEG00000015060	-	100	85.470	Echinops_telfairi
ENSCSAG00000013109	-	100	65.527	ENSEBUG00000016502	prpf18	99	64.672	Eptatretus_burgeri
ENSCSAG00000013109	-	100	99.715	ENSEASG00005019373	-	100	99.715	Equus_asinus_asinus
ENSCSAG00000013109	-	100	99.715	ENSECAG00000006997	PRPF18	100	99.715	Equus_caballus
ENSCSAG00000013109	-	93	61.231	ENSEEUG00000001171	-	100	61.231	Erinaceus_europaeus
ENSCSAG00000013109	-	100	80.966	ENSELUG00000022190	prpf18	100	80.966	Esox_lucius
ENSCSAG00000013109	-	100	99.145	ENSFCAG00000004436	-	100	99.145	Felis_catus
ENSCSAG00000013109	-	93	91.385	ENSFALG00000001912	-	97	91.385	Ficedula_albicollis
ENSCSAG00000013109	-	94	96.657	ENSFDAG00000014026	-	100	96.657	Fukomys_damarensis
ENSCSAG00000013109	-	99	63.429	ENSFDAG00000010713	-	97	63.429	Fukomys_damarensis
ENSCSAG00000013109	-	78	89.377	ENSFHEG00000020125	prpf18	98	89.513	Fundulus_heteroclitus
ENSCSAG00000013109	-	99	78.286	ENSGMOG00000012210	prpf18	99	78.286	Gadus_morhua
ENSCSAG00000013109	-	100	92.023	ENSGALG00000043593	-	100	92.023	Gallus_gallus
ENSCSAG00000013109	-	100	81.197	ENSGAFG00000006034	prpf18	100	81.197	Gambusia_affinis
ENSCSAG00000013109	-	100	79.772	ENSGACG00000012232	prpf18	100	79.772	Gasterosteus_aculeatus
ENSCSAG00000013109	-	100	92.308	ENSGAGG00000016878	-	100	92.308	Gopherus_agassizii
ENSCSAG00000013109	-	93	100.000	ENSGGOG00000025188	-	96	100.000	Gorilla_gorilla
ENSCSAG00000013109	-	100	83.476	ENSHBUG00000010264	prpf18	100	83.476	Haplochromis_burtoni
ENSCSAG00000013109	-	100	96.866	ENSHGLG00000018534	PRPF18	100	96.866	Heterocephalus_glaber_female
ENSCSAG00000013109	-	94	96.960	ENSHGLG00100012161	-	98	96.960	Heterocephalus_glaber_male
ENSCSAG00000013109	-	100	82.906	ENSHCOG00000015987	prpf18	100	82.906	Hippocampus_comes
ENSCSAG00000013109	-	100	82.153	ENSIPUG00000007432	prpf18	100	83.003	Ictalurus_punctatus
ENSCSAG00000013109	-	100	98.006	ENSSTOG00000008735	-	100	98.006	Ictidomys_tridecemlineatus
ENSCSAG00000013109	-	100	70.787	ENSJJAG00000015191	-	100	70.787	Jaculus_jaculus
ENSCSAG00000013109	-	100	97.436	ENSJJAG00000024041	-	100	97.436	Jaculus_jaculus
ENSCSAG00000013109	-	100	81.766	ENSKMAG00000012124	prpf18	100	81.766	Kryptolebias_marmoratus
ENSCSAG00000013109	-	99	81.556	ENSLBEG00000028466	prpf18	99	81.556	Labrus_bergylta
ENSCSAG00000013109	-	100	85.470	ENSLACG00000009885	prpf18	100	85.470	Latimeria_chalumnae
ENSCSAG00000013109	-	100	89.744	ENSLOCG00000016736	prpf18	100	89.744	Lepisosteus_oculatus
ENSCSAG00000013109	-	100	97.436	ENSLAFG00000007753	-	100	97.436	Loxodonta_africana
ENSCSAG00000013109	-	100	100.000	ENSMFAG00000000540	-	100	100.000	Macaca_fascicularis
ENSCSAG00000013109	-	100	100.000	ENSMMUG00000015071	PRPF18	100	100.000	Macaca_mulatta
ENSCSAG00000013109	-	100	100.000	ENSMNEG00000024679	-	100	100.000	Macaca_nemestrina
ENSCSAG00000013109	-	100	82.621	ENSMLEG00000031715	-	100	82.621	Mandrillus_leucophaeus
ENSCSAG00000013109	-	100	82.051	ENSMAMG00000006610	prpf18	100	82.051	Mastacembelus_armatus
ENSCSAG00000013109	-	100	83.476	ENSMZEG00005019392	prpf18	100	83.476	Maylandia_zebra
ENSCSAG00000013109	-	100	90.028	ENSMGAG00000005023	-	100	90.028	Meleagris_gallopavo
ENSCSAG00000013109	-	100	99.715	ENSMICG00000006572	-	100	99.715	Microcebus_murinus
ENSCSAG00000013109	-	100	97.436	ENSMOCG00000021468	Prpf18	100	97.436	Microtus_ochrogaster
ENSCSAG00000013109	-	100	81.197	ENSMMOG00000013012	prpf18	100	81.197	Mola_mola
ENSCSAG00000013109	-	100	83.476	ENSMODG00000024043	-	100	83.476	Monodelphis_domestica
ENSCSAG00000013109	-	96	93.195	ENSMODG00000016902	-	92	93.195	Monodelphis_domestica
ENSCSAG00000013109	-	100	77.746	ENSMALG00000005486	prpf18	100	78.028	Monopterus_albus
ENSCSAG00000013109	-	100	96.866	MGP_CAROLIEiJ_G0023143	Prpf18	100	100.000	Mus_caroli
ENSCSAG00000013109	-	100	96.581	ENSMUSG00000039449	Prpf18	100	100.000	Mus_musculus
ENSCSAG00000013109	-	100	97.151	MGP_PahariEiJ_G0019203	Prpf18	100	100.000	Mus_pahari
ENSCSAG00000013109	-	100	96.296	MGP_SPRETEiJ_G0024061	Prpf18	100	100.000	Mus_spretus
ENSCSAG00000013109	-	100	96.581	ENSMPUG00000000938	-	100	96.581	Mustela_putorius_furo
ENSCSAG00000013109	-	100	96.581	ENSMLUG00000009200	-	100	96.581	Myotis_lucifugus
ENSCSAG00000013109	-	66	92.174	ENSNGAG00000023550	-	82	92.174	Nannospalax_galili
ENSCSAG00000013109	-	100	96.866	ENSNGAG00000012500	-	100	96.866	Nannospalax_galili
ENSCSAG00000013109	-	100	82.906	ENSNBRG00000001778	prpf18	100	82.906	Neolamprologus_brichardi
ENSCSAG00000013109	-	100	100.000	ENSNLEG00000012186	-	100	100.000	Nomascus_leucogenys
ENSCSAG00000013109	-	74	79.923	ENSMEUG00000005032	-	75	79.923	Notamacropus_eugenii
ENSCSAG00000013109	-	78	78.832	ENSOPRG00000002153	-	100	78.832	Ochotona_princeps
ENSCSAG00000013109	-	100	96.581	ENSODEG00000003770	-	100	96.581	Octodon_degus
ENSCSAG00000013109	-	98	82.267	ENSONIG00000014854	prpf18	96	82.267	Oreochromis_niloticus
ENSCSAG00000013109	-	100	94.017	ENSOANG00000015404	-	100	94.017	Ornithorhynchus_anatinus
ENSCSAG00000013109	-	100	97.151	ENSOCUG00000027756	-	100	93.162	Oryctolagus_cuniculus
ENSCSAG00000013109	-	100	82.906	ENSORLG00000010293	prpf18	100	82.906	Oryzias_latipes
ENSCSAG00000013109	-	100	82.906	ENSORLG00020001530	prpf18	100	82.906	Oryzias_latipes_hni
ENSCSAG00000013109	-	100	82.621	ENSORLG00015013705	prpf18	100	82.621	Oryzias_latipes_hsok
ENSCSAG00000013109	-	100	83.476	ENSOMEG00000009167	prpf18	100	83.476	Oryzias_melastigma
ENSCSAG00000013109	-	100	96.296	ENSOGAG00000007294	-	100	96.296	Otolemur_garnettii
ENSCSAG00000013109	-	100	99.145	ENSOARG00000006243	-	100	99.145	Ovis_aries
ENSCSAG00000013109	-	100	100.000	ENSPPAG00000041959	-	100	100.000	Pan_paniscus
ENSCSAG00000013109	-	100	96.581	ENSPPRG00000000107	-	100	96.581	Panthera_pardus
ENSCSAG00000013109	-	100	96.296	ENSPTIG00000021094	-	100	96.296	Panthera_tigris_altaica
ENSCSAG00000013109	-	100	100.000	ENSPTRG00000002306	PRPF18	100	100.000	Pan_troglodytes
ENSCSAG00000013109	-	100	99.715	ENSPANG00000023346	-	100	99.715	Papio_anubis
ENSCSAG00000013109	-	86	98.113	ENSPKIG00000014128	prpf18	96	83.191	Paramormyrops_kingsleyae
ENSCSAG00000013109	-	100	90.598	ENSPSIG00000016064	-	100	90.598	Pelodiscus_sinensis
ENSCSAG00000013109	-	100	76.638	ENSPMGG00000016486	prpf18	100	76.638	Periophthalmus_magnuspinnatus
ENSCSAG00000013109	-	100	97.151	ENSPEMG00000013704	Prpf18	100	97.151	Peromyscus_maniculatus_bairdii
ENSCSAG00000013109	-	100	72.934	ENSPMAG00000000204	prpf18	100	72.934	Petromyzon_marinus
ENSCSAG00000013109	-	93	96.615	ENSPCIG00000012963	-	99	96.615	Phascolarctos_cinereus
ENSCSAG00000013109	-	100	82.051	ENSPFOG00000017611	prpf18	100	82.051	Poecilia_formosa
ENSCSAG00000013109	-	100	81.481	ENSPLAG00000000369	prpf18	100	81.481	Poecilia_latipinna
ENSCSAG00000013109	-	100	82.051	ENSPMEG00000005183	prpf18	100	82.051	Poecilia_mexicana
ENSCSAG00000013109	-	100	80.912	ENSPREG00000015232	prpf18	100	80.912	Poecilia_reticulata
ENSCSAG00000013109	-	100	97.151	ENSPPYG00000002101	PRPF18	100	97.151	Pongo_abelii
ENSCSAG00000013109	-	100	78.917	ENSPCAG00000010833	-	100	78.917	Procavia_capensis
ENSCSAG00000013109	-	100	90.028	ENSPCOG00000013057	-	100	90.028	Propithecus_coquereli
ENSCSAG00000013109	-	100	59.829	ENSPVAG00000002947	-	100	59.829	Pteropus_vampyrus
ENSCSAG00000013109	-	100	83.476	ENSPNYG00000003554	prpf18	100	83.476	Pundamilia_nyererei
ENSCSAG00000013109	-	100	85.470	ENSPNAG00000023151	prpf18	100	85.470	Pygocentrus_nattereri
ENSCSAG00000013109	-	100	96.296	ENSRNOG00000018396	Prpf18	100	96.296	Rattus_norvegicus
ENSCSAG00000013109	-	100	99.430	ENSRBIG00000028028	-	100	99.430	Rhinopithecus_bieti
ENSCSAG00000013109	-	100	99.715	ENSRROG00000040695	-	100	99.715	Rhinopithecus_roxellana
ENSCSAG00000013109	-	100	99.430	ENSSBOG00000034482	-	100	99.430	Saimiri_boliviensis_boliviensis
ENSCSAG00000013109	-	100	75.499	ENSSHAG00000009669	-	100	75.499	Sarcophilus_harrisii
ENSCSAG00000013109	-	100	94.302	ENSSHAG00000016463	-	100	94.302	Sarcophilus_harrisii
ENSCSAG00000013109	-	98	82.899	ENSSFOG00015022118	prpf18	100	75.000	Scleropages_formosus
ENSCSAG00000013109	-	66	48.927	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSCSAG00000013109	-	100	81.766	ENSSMAG00000005308	prpf18	100	81.766	Scophthalmus_maximus
ENSCSAG00000013109	-	100	83.761	ENSSDUG00000015428	prpf18	100	83.761	Seriola_dumerili
ENSCSAG00000013109	-	100	83.761	ENSSLDG00000023989	prpf18	100	83.761	Seriola_lalandi_dorsalis
ENSCSAG00000013109	-	100	67.236	ENSSARG00000005307	-	100	67.236	Sorex_araneus
ENSCSAG00000013109	-	100	90.313	ENSSPUG00000002619	-	100	90.313	Sphenodon_punctatus
ENSCSAG00000013109	-	100	83.191	ENSSPAG00000019502	prpf18	100	83.191	Stegastes_partitus
ENSCSAG00000013109	-	100	99.430	ENSSSCG00000026354	-	100	99.430	Sus_scrofa
ENSCSAG00000013109	-	100	90.028	ENSTGUG00000002286	-	100	90.028	Taeniopygia_guttata
ENSCSAG00000013109	-	100	80.342	ENSTRUG00000011278	prpf18	100	80.342	Takifugu_rubripes
ENSCSAG00000013109	-	100	80.057	ENSTNIG00000000911	prpf18	100	80.057	Tetraodon_nigroviridis
ENSCSAG00000013109	-	80	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSCSAG00000013109	-	100	97.151	ENSTTRG00000011117	PRPF18	100	97.151	Tursiops_truncatus
ENSCSAG00000013109	-	95	93.713	ENSUAMG00000001815	-	94	93.713	Ursus_americanus
ENSCSAG00000013109	-	100	92.023	ENSUMAG00000012329	-	100	92.023	Ursus_maritimus
ENSCSAG00000013109	-	100	91.453	ENSVPAG00000011486	-	100	91.453	Vicugna_pacos
ENSCSAG00000013109	-	100	99.430	ENSVVUG00000005453	-	100	99.430	Vulpes_vulpes
ENSCSAG00000013109	-	100	78.933	ENSXETG00000024057	prpf18	100	79.379	Xenopus_tropicalis
ENSCSAG00000013109	-	100	80.737	ENSXCOG00000020414	prpf18	100	80.737	Xiphophorus_couchianus
ENSCSAG00000013109	-	100	81.766	ENSXMAG00000004713	prpf18	91	81.766	Xiphophorus_maculatus