EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000013544 (Gene tree)
Gene ID: 103226416
Gene Symbol: TWISTNB
Alias: -
Full Name: TWIST neighbor
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 12334 bases
Position: chr21:38488825-38501158
Accession: 103226416
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000009709	SHS2_Rpb7-N	PF03876.17	4.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000011642	TWISTNB-201	3961	XM_007981935	ENSCSAP00000009709	338 (aa)	XP_007980126	A0A0D9RM70

Gene Model

Click here to download ENSCSAG00000013544's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000013544's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000013544	TWISTNB	100	97.929	ENSG00000105849	TWISTNB	100	97.929	Homo_sapiens
ENSCSAG00000013544	TWISTNB	98	68.325	ENSAMEG00000008558	TWISTNB	97	71.728	Ailuropoda_melanoleuca
ENSCSAG00000013544	TWISTNB	86	40.823	ENSACIG00000020400	twistnb	80	43.548	Amphilophus_citrinellus
ENSCSAG00000013544	TWISTNB	95	42.165	ENSAOCG00000024200	twistnb	51	56.122	Amphiprion_ocellaris
ENSCSAG00000013544	TWISTNB	95	42.165	ENSAPEG00000016750	twistnb	51	56.122	Amphiprion_percula
ENSCSAG00000013544	TWISTNB	89	45.427	ENSATEG00000017956	twistnb	88	44.970	Anabas_testudineus
ENSCSAG00000013544	TWISTNB	50	65.089	ENSACAG00000011817	TWISTNB	86	65.089	Anolis_carolinensis
ENSCSAG00000013544	TWISTNB	97	90.964	ENSANAG00000026418	TWISTNB	99	90.746	Aotus_nancymaae
ENSCSAG00000013544	TWISTNB	91	41.538	ENSACLG00000022280	twistnb	78	44.586	Astatotilapia_calliptera
ENSCSAG00000013544	TWISTNB	65	51.142	ENSAMXG00000035868	twistnb	68	48.305	Astyanax_mexicanus
ENSCSAG00000013544	TWISTNB	98	78.144	ENSBTAG00000006721	TWISTNB	99	77.246	Bos_taurus
ENSCSAG00000013544	TWISTNB	97	92.192	ENSCJAG00000001148	TWISTNB	99	91.667	Callithrix_jacchus
ENSCSAG00000013544	TWISTNB	100	75.358	ENSCAFG00000002511	TWISTNB	100	76.791	Canis_familiaris
ENSCSAG00000013544	TWISTNB	98	78.171	ENSCAFG00020002140	TWISTNB	92	79.351	Canis_lupus_dingo
ENSCSAG00000013544	TWISTNB	98	77.083	ENSCHIG00000024078	TWISTNB	99	77.381	Capra_hircus
ENSCSAG00000013544	TWISTNB	100	85.380	ENSTSYG00000001471	TWISTNB	100	85.673	Carlito_syrichta
ENSCSAG00000013544	TWISTNB	99	81.602	ENSCPOG00000031651	TWISTNB	99	81.602	Cavia_porcellus
ENSCSAG00000013544	TWISTNB	100	90.588	ENSCCAG00000026416	TWISTNB	100	92.059	Cebus_capucinus
ENSCSAG00000013544	TWISTNB	100	99.112	ENSCATG00000035621	TWISTNB	100	99.112	Cercocebus_atys
ENSCSAG00000013544	TWISTNB	99	82.249	ENSCLAG00000012696	TWISTNB	100	82.249	Chinchilla_lanigera
ENSCSAG00000013544	TWISTNB	79	88.636	ENSCHOG00000006034	TWISTNB	79	88.636	Choloepus_hoffmanni
ENSCSAG00000013544	TWISTNB	91	60.383	ENSCPBG00000000367	TWISTNB	86	63.028	Chrysemys_picta_bellii
ENSCSAG00000013544	TWISTNB	100	99.112	ENSCANG00000038759	TWISTNB	100	99.112	Colobus_angolensis_palliatus
ENSCSAG00000013544	TWISTNB	96	75.076	ENSCGRG00001000499	Twistnb	99	75.758	Cricetulus_griseus_chok1gshd
ENSCSAG00000013544	TWISTNB	62	54.630	ENSDARG00000024416	twistnb	55	54.630	Danio_rerio
ENSCSAG00000013544	TWISTNB	98	80.838	ENSDNOG00000006438	-	99	81.138	Dasypus_novemcinctus
ENSCSAG00000013544	TWISTNB	91	77.670	ENSDORG00000007795	Twistnb	95	77.346	Dipodomys_ordii
ENSCSAG00000013544	TWISTNB	99	84.226	ENSEASG00005021702	TWISTNB	95	84.524	Equus_asinus_asinus
ENSCSAG00000013544	TWISTNB	99	84.524	ENSECAG00000014563	TWISTNB	95	84.821	Equus_caballus
ENSCSAG00000013544	TWISTNB	89	45.570	ENSELUG00000000098	TWISTNB	83	47.195	Esox_lucius
ENSCSAG00000013544	TWISTNB	98	82.934	ENSFCAG00000025987	TWISTNB	99	82.335	Felis_catus
ENSCSAG00000013544	TWISTNB	83	51.987	ENSFALG00000009761	TWISTNB	97	51.987	Ficedula_albicollis
ENSCSAG00000013544	TWISTNB	97	81.928	ENSFDAG00000017368	TWISTNB	99	81.306	Fukomys_damarensis
ENSCSAG00000013544	TWISTNB	57	56.995	ENSFHEG00000013318	twistnb	54	56.995	Fundulus_heteroclitus
ENSCSAG00000013544	TWISTNB	92	54.459	ENSGALG00000010863	TWISTNB	77	54.459	Gallus_gallus
ENSCSAG00000013544	TWISTNB	51	59.770	ENSGAFG00000018309	twistnb	53	56.995	Gambusia_affinis
ENSCSAG00000013544	TWISTNB	74	47.082	ENSGACG00000006425	twistnb	100	46.067	Gasterosteus_aculeatus
ENSCSAG00000013544	TWISTNB	100	97.337	ENSGGOG00000026888	TWISTNB	100	97.337	Gorilla_gorilla
ENSCSAG00000013544	TWISTNB	87	42.173	ENSHBUG00000020155	twistnb	75	45.695	Haplochromis_burtoni
ENSCSAG00000013544	TWISTNB	99	81.953	ENSHGLG00000010976	TWISTNB	100	82.196	Heterocephalus_glaber_female
ENSCSAG00000013544	TWISTNB	97	82.779	ENSHGLG00100005410	TWISTNB	100	82.196	Heterocephalus_glaber_male
ENSCSAG00000013544	TWISTNB	89	43.385	ENSIPUG00000004117	twistnb	90	42.683	Ictalurus_punctatus
ENSCSAG00000013544	TWISTNB	99	80.769	ENSSTOG00000022702	TWISTNB	93	80.769	Ictidomys_tridecemlineatus
ENSCSAG00000013544	TWISTNB	99	75.298	ENSJJAG00000015887	Twistnb	99	75.298	Jaculus_jaculus
ENSCSAG00000013544	TWISTNB	54	57.065	ENSKMAG00000001591	twistnb	54	54.902	Kryptolebias_marmoratus
ENSCSAG00000013544	TWISTNB	87	52.131	ENSLACG00000010508	TWISTNB	85	53.115	Latimeria_chalumnae
ENSCSAG00000013544	TWISTNB	54	62.295	ENSLOCG00000011399	twistnb	56	61.702	Lepisosteus_oculatus
ENSCSAG00000013544	TWISTNB	98	83.234	ENSLAFG00000008755	TWISTNB	99	82.934	Loxodonta_africana
ENSCSAG00000013544	TWISTNB	100	99.408	ENSMFAG00000045328	TWISTNB	100	99.408	Macaca_fascicularis
ENSCSAG00000013544	TWISTNB	99	99.401	ENSMMUG00000009609	TWISTNB	98	99.401	Macaca_mulatta
ENSCSAG00000013544	TWISTNB	100	98.817	ENSMNEG00000041159	TWISTNB	100	98.817	Macaca_nemestrina
ENSCSAG00000013544	TWISTNB	100	99.408	ENSMLEG00000042783	TWISTNB	100	99.408	Mandrillus_leucophaeus
ENSCSAG00000013544	TWISTNB	91	41.538	ENSMZEG00005007561	twistnb	78	44.586	Maylandia_zebra
ENSCSAG00000013544	TWISTNB	96	87.538	ENSMICG00000036489	TWISTNB	99	87.842	Microcebus_murinus
ENSCSAG00000013544	TWISTNB	95	76.161	ENSMOCG00000003458	Twistnb	98	76.947	Microtus_ochrogaster
ENSCSAG00000013544	TWISTNB	59	51.707	ENSMMOG00000020085	twistnb	53	51.707	Mola_mola
ENSCSAG00000013544	TWISTNB	86	59.532	ENSMODG00000001402	-	68	58.654	Monodelphis_domestica
ENSCSAG00000013544	TWISTNB	93	41.813	ENSMALG00000016407	twistnb	81	42.532	Monopterus_albus
ENSCSAG00000013544	TWISTNB	96	74.924	MGP_CAROLIEiJ_G0017692	Twistnb	99	75.529	Mus_caroli
ENSCSAG00000013544	TWISTNB	96	74.622	ENSMUSG00000020561	Twistnb	99	74.848	Mus_musculus
ENSCSAG00000013544	TWISTNB	96	74.772	MGP_PahariEiJ_G0029450	Twistnb	99	74.772	Mus_pahari
ENSCSAG00000013544	TWISTNB	96	74.924	MGP_SPRETEiJ_G0018534	Twistnb	99	75.152	Mus_spretus
ENSCSAG00000013544	TWISTNB	98	83.533	ENSMPUG00000013948	TWISTNB	93	82.934	Mustela_putorius_furo
ENSCSAG00000013544	TWISTNB	91	77.994	ENSMLUG00000008848	TWISTNB	99	77.994	Myotis_lucifugus
ENSCSAG00000013544	TWISTNB	59	84.422	ENSNGAG00000022455	Twistnb	99	84.422	Nannospalax_galili
ENSCSAG00000013544	TWISTNB	59	53.769	ENSNBRG00000008652	twistnb	52	54.315	Neolamprologus_brichardi
ENSCSAG00000013544	TWISTNB	95	97.205	ENSNLEG00000035755	TWISTNB	95	97.205	Nomascus_leucogenys
ENSCSAG00000013544	TWISTNB	100	75.000	ENSOPRG00000016109	TWISTNB	100	75.000	Ochotona_princeps
ENSCSAG00000013544	TWISTNB	99	81.416	ENSODEG00000007222	TWISTNB	99	81.065	Octodon_degus
ENSCSAG00000013544	TWISTNB	88	45.048	ENSORLG00000004005	twistnb	72	48.173	Oryzias_latipes
ENSCSAG00000013544	TWISTNB	88	44.340	ENSORLG00020002579	twistnb	80	48.173	Oryzias_latipes_hni
ENSCSAG00000013544	TWISTNB	88	44.025	ENSORLG00015013403	twistnb	71	48.837	Oryzias_latipes_hsok
ENSCSAG00000013544	TWISTNB	100	86.550	ENSOGAG00000009189	TWISTNB	100	87.719	Otolemur_garnettii
ENSCSAG00000013544	TWISTNB	98	77.612	ENSOARG00000009803	TWISTNB	98	77.910	Ovis_aries
ENSCSAG00000013544	TWISTNB	100	97.929	ENSPPAG00000034623	TWISTNB	100	97.929	Pan_paniscus
ENSCSAG00000013544	TWISTNB	98	82.036	ENSPPRG00000005877	TWISTNB	99	81.627	Panthera_pardus
ENSCSAG00000013544	TWISTNB	87	82.770	ENSPTIG00000021539	TWISTNB	98	82.095	Panthera_tigris_altaica
ENSCSAG00000013544	TWISTNB	100	98.225	ENSPTRG00000018962	TWISTNB	100	98.225	Pan_troglodytes
ENSCSAG00000013544	TWISTNB	100	98.817	ENSPANG00000015736	TWISTNB	100	98.817	Papio_anubis
ENSCSAG00000013544	TWISTNB	57	60.622	ENSPKIG00000025635	twistnb	53	60.622	Paramormyrops_kingsleyae
ENSCSAG00000013544	TWISTNB	92	43.452	ENSPMGG00000019023	twistnb	50	56.122	Periophthalmus_magnuspinnatus
ENSCSAG00000013544	TWISTNB	85	58.076	ENSPCIG00000017456	TWISTNB	96	56.113	Phascolarctos_cinereus
ENSCSAG00000013544	TWISTNB	100	96.165	ENSPPYG00000017752	TWISTNB	100	96.165	Pongo_abelii
ENSCSAG00000013544	TWISTNB	100	83.041	ENSPCOG00000017601	TWISTNB	100	86.550	Propithecus_coquereli
ENSCSAG00000013544	TWISTNB	99	78.006	ENSPVAG00000015574	TWISTNB	99	78.299	Pteropus_vampyrus
ENSCSAG00000013544	TWISTNB	58	54.315	ENSPNYG00000002674	twistnb	52	54.315	Pundamilia_nyererei
ENSCSAG00000013544	TWISTNB	92	45.697	ENSPNAG00000011956	twistnb	93	45.858	Pygocentrus_nattereri
ENSCSAG00000013544	TWISTNB	94	75.466	ENSRNOG00000010750	Twistnb	99	75.776	Rattus_norvegicus
ENSCSAG00000013544	TWISTNB	99	98.209	ENSRBIG00000043007	TWISTNB	98	98.209	Rhinopithecus_bieti
ENSCSAG00000013544	TWISTNB	100	97.929	ENSRROG00000040155	TWISTNB	100	97.929	Rhinopithecus_roxellana
ENSCSAG00000013544	TWISTNB	97	91.265	ENSSBOG00000023188	TWISTNB	99	91.045	Saimiri_boliviensis_boliviensis
ENSCSAG00000013544	TWISTNB	54	55.738	ENSSFOG00015012788	twistnb	63	50.698	Scleropages_formosus
ENSCSAG00000013544	TWISTNB	99	40.503	ENSSMAG00000012792	twistnb	84	42.073	Scophthalmus_maximus
ENSCSAG00000013544	TWISTNB	92	42.609	ENSSDUG00000007038	twistnb	81	46.452	Seriola_dumerili
ENSCSAG00000013544	TWISTNB	93	50.610	ENSSPUG00000007595	TWISTNB	96	49.511	Sphenodon_punctatus
ENSCSAG00000013544	TWISTNB	90	43.711	ENSSPAG00000005871	twistnb	83	45.161	Stegastes_partitus
ENSCSAG00000013544	TWISTNB	98	79.762	ENSSSCG00000025298	TWISTNB	99	78.571	Sus_scrofa
ENSCSAG00000013544	TWISTNB	91	42.547	ENSTNIG00000017778	twistnb	89	42.812	Tetraodon_nigroviridis
ENSCSAG00000013544	TWISTNB	100	81.416	ENSTBEG00000003554	TWISTNB	100	82.353	Tupaia_belangeri
ENSCSAG00000013544	TWISTNB	98	83.832	ENSUAMG00000017593	TWISTNB	99	83.234	Ursus_americanus
ENSCSAG00000013544	TWISTNB	98	83.533	ENSUMAG00000022203	TWISTNB	99	82.934	Ursus_maritimus
ENSCSAG00000013544	TWISTNB	98	78.761	ENSVVUG00000008386	TWISTNB	99	79.646	Vulpes_vulpes