EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000013997 (Gene tree)
Gene ID: 103245912
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 149357 bases
Position: chr2:22223919-22373275
Accession: 103245912
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000010137	ResIII	PF04851.15	4.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000012091	CHD6-201	10830	XM_008017154	ENSCSAP00000010137	2716 (aa)	XP_008015345	A0A0D9RNE8

Gene Model

Click here to download ENSCSAG00000013997's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000013997's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000013997	CHD6	62	61.341	ENSCSAG00000016489	CHD8	63	62.647
ENSCSAG00000013997	CHD6	79	62.685	ENSCSAG00000005311	CHD9	72	62.743
ENSCSAG00000013997	CHD6	74	68.714	ENSCSAG00000014349	CHD7	71	65.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000013997	CHD6	100	98.233	ENSG00000124177	CHD6	100	100.000	Homo_sapiens
ENSCSAG00000013997	CHD6	74	75.347	ENSAPOG00000013736	chd6	64	75.896	Acanthochromis_polyacanthus
ENSCSAG00000013997	CHD6	100	91.474	ENSAMEG00000009496	CHD6	100	91.474	Ailuropoda_melanoleuca
ENSCSAG00000013997	CHD6	74	75.381	ENSATEG00000005608	chd6	62	77.395	Anabas_testudineus
ENSCSAG00000013997	CHD6	68	78.629	ENSAPLG00000015592	CHD6	100	72.505	Anas_platyrhynchos
ENSCSAG00000013997	CHD6	95	72.828	ENSACAG00000006842	CHD6	95	73.888	Anolis_carolinensis
ENSCSAG00000013997	CHD6	100	96.797	ENSANAG00000037548	CHD6	100	96.797	Aotus_nancymaae
ENSCSAG00000013997	CHD6	77	73.963	ENSAMXG00000009576	chd6	77	69.855	Astyanax_mexicanus
ENSCSAG00000013997	CHD6	100	88.326	ENSBTAG00000005733	CHD6	100	88.326	Bos_taurus
ENSCSAG00000013997	CHD6	100	96.723	ENSCJAG00000017920	CHD6	100	96.723	Callithrix_jacchus
ENSCSAG00000013997	CHD6	100	91.510	ENSCAFG00000009236	CHD6	100	91.510	Canis_familiaris
ENSCSAG00000013997	CHD6	99	90.812	ENSCAFG00020012906	CHD6	99	97.463	Canis_lupus_dingo
ENSCSAG00000013997	CHD6	100	88.399	ENSCHIG00000017606	CHD6	100	88.399	Capra_hircus
ENSCSAG00000013997	CHD6	84	93.111	ENSTSYG00000014635	CHD6	100	93.111	Carlito_syrichta
ENSCSAG00000013997	CHD6	100	91.290	ENSCPOG00000015641	CHD6	100	91.290	Cavia_porcellus
ENSCSAG00000013997	CHD6	100	97.128	ENSCCAG00000036828	CHD6	100	97.128	Cebus_capucinus
ENSCSAG00000013997	CHD6	100	99.080	ENSCATG00000039248	CHD6	100	99.080	Cercocebus_atys
ENSCSAG00000013997	CHD6	100	91.272	ENSCLAG00000013743	CHD6	100	91.272	Chinchilla_lanigera
ENSCSAG00000013997	CHD6	91	89.789	ENSCHOG00000012647	CHD6	95	89.789	Choloepus_hoffmanni
ENSCSAG00000013997	CHD6	99	73.175	ENSCPBG00000019382	CHD6	99	73.748	Chrysemys_picta_bellii
ENSCSAG00000013997	CHD6	100	99.153	ENSCANG00000043435	CHD6	100	99.153	Colobus_angolensis_palliatus
ENSCSAG00000013997	CHD6	100	89.563	ENSCGRG00001002694	Chd6	100	89.599	Cricetulus_griseus_chok1gshd
ENSCSAG00000013997	CHD6	82	73.738	ENSDARG00000017244	chd6	79	73.738	Danio_rerio
ENSCSAG00000013997	CHD6	99	90.638	ENSDNOG00000004176	CHD6	99	90.638	Dasypus_novemcinctus
ENSCSAG00000013997	CHD6	99	92.166	ENSEASG00005023433	CHD6	95	97.876	Equus_asinus_asinus
ENSCSAG00000013997	CHD6	99	92.828	ENSECAG00000011761	CHD6	100	92.828	Equus_caballus
ENSCSAG00000013997	CHD6	72	79.740	ENSELUG00000012309	chd6	92	79.740	Esox_lucius
ENSCSAG00000013997	CHD6	100	91.878	ENSFCAG00000003572	CHD6	100	91.878	Felis_catus
ENSCSAG00000013997	CHD6	99	71.171	ENSFALG00000012563	CHD6	98	71.423	Ficedula_albicollis
ENSCSAG00000013997	CHD6	99	91.556	ENSFDAG00000013791	CHD6	99	91.556	Fukomys_damarensis
ENSCSAG00000013997	CHD6	73	69.478	ENSGMOG00000011715	chd6	82	70.523	Gadus_morhua
ENSCSAG00000013997	CHD6	78	69.904	ENSGACG00000000037	chd6	92	64.217	Gasterosteus_aculeatus
ENSCSAG00000013997	CHD6	100	98.233	ENSGGOG00000013123	CHD6	100	98.233	Gorilla_gorilla
ENSCSAG00000013997	CHD6	78	72.153	ENSHBUG00000014701	chd6	65	73.419	Haplochromis_burtoni
ENSCSAG00000013997	CHD6	100	91.734	ENSHGLG00000004548	CHD6	100	91.771	Heterocephalus_glaber_female
ENSCSAG00000013997	CHD6	100	91.734	ENSHGLG00100006401	CHD6	100	91.771	Heterocephalus_glaber_male
ENSCSAG00000013997	CHD6	76	77.703	ENSIPUG00000003692	chd6	74	76.451	Ictalurus_punctatus
ENSCSAG00000013997	CHD6	100	92.319	ENSSTOG00000013382	CHD6	100	92.319	Ictidomys_tridecemlineatus
ENSCSAG00000013997	CHD6	88	76.812	ENSLACG00000010881	CHD6	86	76.754	Latimeria_chalumnae
ENSCSAG00000013997	CHD6	73	80.286	ENSLOCG00000007386	chd6	84	75.664	Lepisosteus_oculatus
ENSCSAG00000013997	CHD6	100	91.807	ENSLAFG00000012144	CHD6	100	91.807	Loxodonta_africana
ENSCSAG00000013997	CHD6	100	99.448	ENSMFAG00000032830	CHD6	100	99.448	Macaca_fascicularis
ENSCSAG00000013997	CHD6	100	99.448	ENSMMUG00000020458	CHD6	100	99.448	Macaca_mulatta
ENSCSAG00000013997	CHD6	100	99.411	ENSMNEG00000040847	CHD6	100	99.411	Macaca_nemestrina
ENSCSAG00000013997	CHD6	99	99.482	ENSMLEG00000031965	CHD6	100	99.445	Mandrillus_leucophaeus
ENSCSAG00000013997	CHD6	74	73.576	ENSMAMG00000013111	chd6	62	77.310	Mastacembelus_armatus
ENSCSAG00000013997	CHD6	99	71.100	ENSMGAG00000001121	CHD6	100	71.904	Meleagris_gallopavo
ENSCSAG00000013997	CHD6	99	94.011	ENSMICG00000016641	CHD6	99	94.011	Microcebus_murinus
ENSCSAG00000013997	CHD6	89	81.345	ENSMODG00000000720	-	99	81.345	Monodelphis_domestica
ENSCSAG00000013997	CHD6	100	87.946	MGP_CAROLIEiJ_G0024604	Chd6	100	94.768	Mus_caroli
ENSCSAG00000013997	CHD6	100	88.203	ENSMUSG00000057133	Chd6	100	94.684	Mus_musculus
ENSCSAG00000013997	CHD6	100	87.982	MGP_PahariEiJ_G0026048	Chd6	100	95.105	Mus_pahari
ENSCSAG00000013997	CHD6	100	88.240	MGP_SPRETEiJ_G0025526	Chd6	100	94.768	Mus_spretus
ENSCSAG00000013997	CHD6	100	90.139	ENSMPUG00000017695	CHD6	100	90.139	Mustela_putorius_furo
ENSCSAG00000013997	CHD6	100	91.180	ENSMLUG00000016247	CHD6	100	91.180	Myotis_lucifugus
ENSCSAG00000013997	CHD6	78	73.172	ENSNBRG00000013839	chd6	79	72.309	Neolamprologus_brichardi
ENSCSAG00000013997	CHD6	99	96.673	ENSNLEG00000006496	CHD6	99	96.673	Nomascus_leucogenys
ENSCSAG00000013997	CHD6	100	87.505	ENSOPRG00000013376	-	100	87.505	Ochotona_princeps
ENSCSAG00000013997	CHD6	84	74.183	ENSONIG00000000393	chd6	87	73.648	Oreochromis_niloticus
ENSCSAG00000013997	CHD6	99	70.149	ENSOANG00000014347	CHD6	99	70.352	Ornithorhynchus_anatinus
ENSCSAG00000013997	CHD6	99	89.849	ENSOCUG00000012394	CHD6	100	89.849	Oryctolagus_cuniculus
ENSCSAG00000013997	CHD6	81	70.104	ENSORLG00020021891	chd6	95	85.972	Oryzias_latipes_hni
ENSCSAG00000013997	CHD6	99	91.963	ENSOGAG00000002427	CHD6	100	91.753	Otolemur_garnettii
ENSCSAG00000013997	CHD6	99	86.076	ENSOARG00000002597	CHD6	100	86.113	Ovis_aries
ENSCSAG00000013997	CHD6	100	92.062	ENSPPRG00000014756	CHD6	100	92.062	Panthera_pardus
ENSCSAG00000013997	CHD6	100	91.951	ENSPTIG00000011094	CHD6	100	91.951	Panthera_tigris_altaica
ENSCSAG00000013997	CHD6	100	98.270	ENSPTRG00000013504	CHD6	100	98.270	Pan_troglodytes
ENSCSAG00000013997	CHD6	100	99.448	ENSPANG00000025554	CHD6	100	99.448	Papio_anubis
ENSCSAG00000013997	CHD6	77	75.855	ENSPKIG00000005578	chd6	79	72.424	Paramormyrops_kingsleyae
ENSCSAG00000013997	CHD6	77	76.387	ENSPMGG00000014877	chd6	88	76.529	Periophthalmus_magnuspinnatus
ENSCSAG00000013997	CHD6	100	80.418	ENSPCIG00000028037	CHD6	100	80.931	Phascolarctos_cinereus
ENSCSAG00000013997	CHD6	79	70.366	ENSPLAG00000003128	chd6	68	72.919	Poecilia_latipinna
ENSCSAG00000013997	CHD6	73	72.756	ENSPREG00000022653	chd6	99	86.447	Poecilia_reticulata
ENSCSAG00000013997	CHD6	100	98.381	ENSPPYG00000011016	CHD6	100	98.381	Pongo_abelii
ENSCSAG00000013997	CHD6	99	93.623	ENSPCOG00000001089	CHD6	99	93.623	Propithecus_coquereli
ENSCSAG00000013997	CHD6	78	74.886	ENSPNYG00000022516	chd6	78	74.014	Pundamilia_nyererei
ENSCSAG00000013997	CHD6	76	75.298	ENSPNAG00000012825	chd6	79	71.480	Pygocentrus_nattereri
ENSCSAG00000013997	CHD6	100	87.505	ENSRNOG00000016744	Chd6	100	87.431	Rattus_norvegicus
ENSCSAG00000013997	CHD6	100	96.944	ENSSBOG00000022089	CHD6	100	96.944	Saimiri_boliviensis_boliviensis
ENSCSAG00000013997	CHD6	100	80.169	ENSSHAG00000017072	CHD6	100	80.682	Sarcophilus_harrisii
ENSCSAG00000013997	CHD6	78	76.187	ENSSFOG00015012920	chd6	81	72.965	Scleropages_formosus
ENSCSAG00000013997	CHD6	59	99.342	ENSSARG00000002615	-	61	99.342	Sorex_araneus
ENSCSAG00000013997	CHD6	100	90.705	ENSSSCG00000007360	CHD6	100	91.462	Sus_scrofa
ENSCSAG00000013997	CHD6	51	77.445	ENSTNIG00000017487	chd6	58	75.711	Tetraodon_nigroviridis
ENSCSAG00000013997	CHD6	100	88.179	ENSTTRG00000013438	CHD6	100	88.179	Tursiops_truncatus
ENSCSAG00000013997	CHD6	99	90.443	ENSUAMG00000024036	CHD6	95	96.332	Ursus_americanus
ENSCSAG00000013997	CHD6	99	91.842	ENSUMAG00000002017	CHD6	95	96.332	Ursus_maritimus
ENSCSAG00000013997	CHD6	94	89.870	ENSVPAG00000007941	CHD6	95	89.938	Vicugna_pacos
ENSCSAG00000013997	CHD6	100	91.621	ENSVVUG00000029164	CHD6	100	91.621	Vulpes_vulpes
ENSCSAG00000013997	CHD6	82	72.819	ENSXETG00000021445	chd6	89	69.702	Xenopus_tropicalis