EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000014022 (Gene tree)
Gene ID: 103245801
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 3442 bases
Position: chr2:20342681-20346122
Accession: 103245801
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000010161	RRM_1	PF00076.22	6.7e-33	1	2
ENSCSAP00000010161	RRM_1	PF00076.22	6.7e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000012116	SRSF6-201	1445	-	ENSCSAP00000010161	343 (aa)	XP_008015169	A0A0D9RNH2

Gene Model

Click here to download ENSCSAG00000014022's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03040	Spliceosome	KEGG
csab05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000014022's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000014022	SRSF6	52	65.363	ENSCSAG00000013041	SRSF5	66	64.130
ENSCSAG00000014022	SRSF6	58	39.713	ENSCSAG00000005642	-	76	40.670

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000014022	SRSF6	100	99.419	ENSG00000124193	SRSF6	100	99.419	Homo_sapiens
ENSCSAG00000014022	SRSF6	94	85.538	ENSAMEG00000003710	SRSF6	94	85.538	Ailuropoda_melanoleuca
ENSCSAG00000014022	SRSF6	95	63.746	ENSACIG00000020091	-	95	80.315	Amphilophus_citrinellus
ENSCSAG00000014022	SRSF6	86	68.581	ENSACIG00000023658	-	56	87.778	Amphilophus_citrinellus
ENSCSAG00000014022	SRSF6	53	85.246	ENSAOCG00000004309	-	57	83.152	Amphiprion_ocellaris
ENSCSAG00000014022	SRSF6	53	88.649	ENSAPEG00000013086	-	53	88.172	Amphiprion_percula
ENSCSAG00000014022	SRSF6	69	72.083	ENSAPEG00000020746	-	66	79.787	Amphiprion_percula
ENSCSAG00000014022	SRSF6	53	82.967	ENSATEG00000007255	-	71	80.000	Anabas_testudineus
ENSCSAG00000014022	SRSF6	94	82.099	ENSACAG00000002061	SRSF6	92	85.093	Anolis_carolinensis
ENSCSAG00000014022	SRSF6	100	98.547	ENSANAG00000024080	SRSF6	100	98.547	Aotus_nancymaae
ENSCSAG00000014022	SRSF6	53	83.333	ENSAMXG00000042692	-	96	78.519	Astyanax_mexicanus
ENSCSAG00000014022	SRSF6	53	87.634	ENSAMXG00000003101	-	51	85.789	Astyanax_mexicanus
ENSCSAG00000014022	SRSF6	100	97.101	ENSBTAG00000008527	SRSF6	100	97.101	Bos_taurus
ENSCSAG00000014022	SRSF6	78	100.000	ENSCJAG00000048403	SRSF6	99	100.000	Callithrix_jacchus
ENSCSAG00000014022	SRSF6	100	97.391	ENSCAFG00000009289	SRSF6	100	97.391	Canis_familiaris
ENSCSAG00000014022	SRSF6	100	97.391	ENSCAFG00020013559	SRSF6	100	97.391	Canis_lupus_dingo
ENSCSAG00000014022	SRSF6	100	97.101	ENSCHIG00000009148	-	100	97.101	Capra_hircus
ENSCSAG00000014022	SRSF6	100	97.681	ENSCHIG00000015890	-	100	97.681	Capra_hircus
ENSCSAG00000014022	SRSF6	100	82.899	ENSTSYG00000026476	SRSF6	100	82.899	Carlito_syrichta
ENSCSAG00000014022	SRSF6	94	80.556	ENSCPOG00000011761	SRSF6	98	68.613	Cavia_porcellus
ENSCSAG00000014022	SRSF6	94	68.468	ENSCCAG00000018540	-	62	87.766	Cebus_capucinus
ENSCSAG00000014022	SRSF6	100	98.837	ENSCCAG00000026018	-	100	98.837	Cebus_capucinus
ENSCSAG00000014022	SRSF6	100	100.000	ENSCATG00000030794	SRSF6	100	100.000	Cercocebus_atys
ENSCSAG00000014022	SRSF6	100	97.681	ENSCLAG00000010247	SRSF6	100	97.681	Chinchilla_lanigera
ENSCSAG00000014022	SRSF6	100	83.478	ENSCHOG00000000561	SRSF6	100	83.478	Choloepus_hoffmanni
ENSCSAG00000014022	SRSF6	54	92.553	ENSCPBG00000018200	SRSF6	94	85.015	Chrysemys_picta_bellii
ENSCSAG00000014022	SRSF6	100	84.840	ENSCANG00000042529	-	100	84.840	Colobus_angolensis_palliatus
ENSCSAG00000014022	SRSF6	100	99.125	ENSCANG00000037774	-	100	99.125	Colobus_angolensis_palliatus
ENSCSAG00000014022	SRSF6	99	97.633	ENSCGRG00001022339	Srsf6	99	97.633	Cricetulus_griseus_chok1gshd
ENSCSAG00000014022	SRSF6	62	96.262	ENSCGRG00000006618	Srsf6	100	96.262	Cricetulus_griseus_crigri
ENSCSAG00000014022	SRSF6	53	83.957	ENSDARG00000016783	srsf6b	82	91.026	Danio_rerio
ENSCSAG00000014022	SRSF6	94	96.296	ENSDNOG00000008410	SRSF6	94	96.296	Dasypus_novemcinctus
ENSCSAG00000014022	SRSF6	100	97.681	ENSDORG00000028378	Srsf6	100	97.681	Dipodomys_ordii
ENSCSAG00000014022	SRSF6	93	92.500	ENSETEG00000006221	SRSF6	94	90.123	Echinops_telfairi
ENSCSAG00000014022	SRSF6	100	96.812	ENSEASG00005023429	SRSF6	100	96.812	Equus_asinus_asinus
ENSCSAG00000014022	SRSF6	100	96.812	ENSECAG00000023932	SRSF6	100	96.812	Equus_caballus
ENSCSAG00000014022	SRSF6	56	93.333	ENSEEUG00000002324	SRSF6	90	93.909	Erinaceus_europaeus
ENSCSAG00000014022	SRSF6	53	84.530	ENSELUG00000013506	SRSF6	70	88.462	Esox_lucius
ENSCSAG00000014022	SRSF6	100	97.391	ENSFCAG00000032814	SRSF6	100	97.391	Felis_catus
ENSCSAG00000014022	SRSF6	94	82.099	ENSFDAG00000012191	SRSF6	93	79.321	Fukomys_damarensis
ENSCSAG00000014022	SRSF6	87	71.148	ENSFHEG00000023065	srsf6a	55	87.500	Fundulus_heteroclitus
ENSCSAG00000014022	SRSF6	53	83.425	ENSGMOG00000014458	srsf6a	52	78.646	Gadus_morhua
ENSCSAG00000014022	SRSF6	52	72.067	ENSGMOG00000006105	srsf6a	62	70.391	Gadus_morhua
ENSCSAG00000014022	SRSF6	93	82.209	ENSGALG00000000990	SRSF6	94	83.636	Gallus_gallus
ENSCSAG00000014022	SRSF6	87	59.226	ENSGACG00000006084	srsf6a	53	83.871	Gasterosteus_aculeatus
ENSCSAG00000014022	SRSF6	54	92.553	ENSGAGG00000003238	SRSF6	94	85.015	Gopherus_agassizii
ENSCSAG00000014022	SRSF6	100	99.419	ENSGGOG00000009808	SRSF6	100	99.419	Gorilla_gorilla
ENSCSAG00000014022	SRSF6	63	73.684	ENSHBUG00000006386	-	58	83.696	Haplochromis_burtoni
ENSCSAG00000014022	SRSF6	100	97.681	ENSHGLG00000007348	SRSF6	100	97.681	Heterocephalus_glaber_female
ENSCSAG00000014022	SRSF6	91	76.358	ENSHGLG00000007701	-	58	79.144	Heterocephalus_glaber_female
ENSCSAG00000014022	SRSF6	100	82.899	ENSHGLG00100005043	SRSF6	100	82.899	Heterocephalus_glaber_male
ENSCSAG00000014022	SRSF6	53	83.607	ENSHCOG00000002740	srsf6a	57	83.152	Hippocampus_comes
ENSCSAG00000014022	SRSF6	53	86.885	ENSIPUG00000004776	-	72	74.236	Ictalurus_punctatus
ENSCSAG00000014022	SRSF6	100	98.251	ENSSTOG00000010866	SRSF6	100	98.251	Ictidomys_tridecemlineatus
ENSCSAG00000014022	SRSF6	56	95.812	ENSJJAG00000020690	Srsf6	91	95.855	Jaculus_jaculus
ENSCSAG00000014022	SRSF6	53	84.783	ENSLBEG00000007356	srsf6a	52	85.484	Labrus_bergylta
ENSCSAG00000014022	SRSF6	89	83.226	ENSLACG00000005466	SRSF6	54	91.848	Latimeria_chalumnae
ENSCSAG00000014022	SRSF6	69	94.979	ENSLAFG00000006682	SRSF6	89	95.197	Loxodonta_africana
ENSCSAG00000014022	SRSF6	100	100.000	ENSMFAG00000036925	SRSF6	100	100.000	Macaca_fascicularis
ENSCSAG00000014022	SRSF6	100	100.000	ENSMMUG00000006742	SRSF6	100	100.000	Macaca_mulatta
ENSCSAG00000014022	SRSF6	100	98.542	ENSMNEG00000038270	-	100	98.542	Macaca_nemestrina
ENSCSAG00000014022	SRSF6	100	99.417	ENSMNEG00000027392	-	100	99.417	Macaca_nemestrina
ENSCSAG00000014022	SRSF6	62	100.000	ENSMLEG00000031524	SRSF6	100	100.000	Mandrillus_leucophaeus
ENSCSAG00000014022	SRSF6	53	88.108	ENSMAMG00000017161	srsf6a	53	87.634	Mastacembelus_armatus
ENSCSAG00000014022	SRSF6	63	71.861	ENSMZEG00005008032	-	57	83.696	Maylandia_zebra
ENSCSAG00000014022	SRSF6	100	97.399	ENSMICG00000008537	SRSF6	100	97.399	Microcebus_murinus
ENSCSAG00000014022	SRSF6	62	96.262	ENSMOCG00000018738	Srsf6	100	96.262	Microtus_ochrogaster
ENSCSAG00000014022	SRSF6	54	95.699	ENSMODG00000003107	SRSF6	95	91.385	Monodelphis_domestica
ENSCSAG00000014022	SRSF6	99	96.746	MGP_CAROLIEiJ_G0024606	Srsf6	99	96.746	Mus_caroli
ENSCSAG00000014022	SRSF6	99	97.041	ENSMUSG00000016921	Srsf6	99	97.041	Mus_musculus
ENSCSAG00000014022	SRSF6	99	96.746	MGP_PahariEiJ_G0026050	Srsf6	99	96.746	Mus_pahari
ENSCSAG00000014022	SRSF6	99	97.041	MGP_SPRETEiJ_G0025528	Srsf6	99	97.041	Mus_spretus
ENSCSAG00000014022	SRSF6	83	97.569	ENSMPUG00000017692	SRSF6	99	97.569	Mustela_putorius_furo
ENSCSAG00000014022	SRSF6	93	80.435	ENSMLUG00000016618	SRSF6	94	80.556	Myotis_lucifugus
ENSCSAG00000014022	SRSF6	99	97.337	ENSNGAG00000017560	Srsf6	99	97.337	Nannospalax_galili
ENSCSAG00000014022	SRSF6	53	82.514	ENSNBRG00000014709	-	58	83.696	Neolamprologus_brichardi
ENSCSAG00000014022	SRSF6	100	99.419	ENSNLEG00000006524	SRSF6	100	99.419	Nomascus_leucogenys
ENSCSAG00000014022	SRSF6	54	95.699	ENSMEUG00000014615	SRSF6	99	93.115	Notamacropus_eugenii
ENSCSAG00000014022	SRSF6	75	96.139	ENSOPRG00000002017	-	100	96.139	Ochotona_princeps
ENSCSAG00000014022	SRSF6	53	84.153	ENSONIG00000020247	-	53	84.239	Oreochromis_niloticus
ENSCSAG00000014022	SRSF6	53	85.792	ENSONIG00000001925	-	52	88.172	Oreochromis_niloticus
ENSCSAG00000014022	SRSF6	74	58.268	ENSOCUG00000023999	-	70	63.687	Oryctolagus_cuniculus
ENSCSAG00000014022	SRSF6	84	80.392	ENSOCUG00000009785	-	98	83.784	Oryctolagus_cuniculus
ENSCSAG00000014022	SRSF6	55	99.465	ENSOGAG00000014468	SRSF6	94	96.605	Otolemur_garnettii
ENSCSAG00000014022	SRSF6	93	93.478	ENSOARG00000003117	SRSF6	94	93.519	Ovis_aries
ENSCSAG00000014022	SRSF6	100	99.128	ENSPPAG00000034327	-	100	99.128	Pan_paniscus
ENSCSAG00000014022	SRSF6	90	85.761	ENSPPAG00000043131	-	100	88.026	Pan_paniscus
ENSCSAG00000014022	SRSF6	100	97.391	ENSPPRG00000008917	SRSF6	100	97.391	Panthera_pardus
ENSCSAG00000014022	SRSF6	62	96.759	ENSPTIG00000019153	SRSF6	100	96.759	Panthera_tigris_altaica
ENSCSAG00000014022	SRSF6	100	99.128	ENSPTRG00000044686	-	100	99.128	Pan_troglodytes
ENSCSAG00000014022	SRSF6	90	85.761	ENSPTRG00000046274	-	100	88.026	Pan_troglodytes
ENSCSAG00000014022	SRSF6	100	100.000	ENSPANG00000035224	SRSF6	100	100.000	Papio_anubis
ENSCSAG00000014022	SRSF6	100	66.092	ENSPKIG00000018463	-	77	92.308	Paramormyrops_kingsleyae
ENSCSAG00000014022	SRSF6	52	75.691	ENSPKIG00000015703	-	95	61.745	Paramormyrops_kingsleyae
ENSCSAG00000014022	SRSF6	87	72.937	ENSPMGG00000014963	srsf6a	55	89.130	Periophthalmus_magnuspinnatus
ENSCSAG00000014022	SRSF6	54	95.699	ENSPCIG00000003820	SRSF6	95	91.077	Phascolarctos_cinereus
ENSCSAG00000014022	SRSF6	53	87.931	ENSPFOG00000006437	srsf6a	50	83.158	Poecilia_formosa
ENSCSAG00000014022	SRSF6	87	63.208	ENSPLAG00000009243	srsf6a	80	82.677	Poecilia_latipinna
ENSCSAG00000014022	SRSF6	53	85.326	ENSPMEG00000006042	SRSF6	54	87.027	Poecilia_mexicana
ENSCSAG00000014022	SRSF6	100	99.419	ENSPPYG00000011019	SRSF6	100	99.419	Pongo_abelii
ENSCSAG00000014022	SRSF6	54	98.378	ENSPCAG00000010954	SRSF6	96	93.168	Procavia_capensis
ENSCSAG00000014022	SRSF6	100	97.977	ENSPCOG00000026364	SRSF6	100	97.977	Propithecus_coquereli
ENSCSAG00000014022	SRSF6	94	95.652	ENSPVAG00000015232	SRSF6	94	95.652	Pteropus_vampyrus
ENSCSAG00000014022	SRSF6	53	82.514	ENSPNYG00000004944	-	58	83.696	Pundamilia_nyererei
ENSCSAG00000014022	SRSF6	53	88.525	ENSPNYG00000011272	-	51	87.634	Pundamilia_nyererei
ENSCSAG00000014022	SRSF6	99	97.041	ENSRNOG00000006380	Srsf6	99	97.041	Rattus_norvegicus
ENSCSAG00000014022	SRSF6	100	97.668	ENSRBIG00000041414	SRSF6	100	97.668	Rhinopithecus_bieti
ENSCSAG00000014022	SRSF6	100	99.417	ENSRROG00000029989	SRSF6	100	99.417	Rhinopithecus_roxellana
ENSCSAG00000014022	SRSF6	100	98.547	ENSSBOG00000033708	-	100	98.547	Saimiri_boliviensis_boliviensis
ENSCSAG00000014022	SRSF6	93	71.473	ENSSBOG00000034078	-	54	77.348	Saimiri_boliviensis_boliviensis
ENSCSAG00000014022	SRSF6	54	95.699	ENSSHAG00000012805	SRSF6	95	91.077	Sarcophilus_harrisii
ENSCSAG00000014022	SRSF6	89	64.516	ENSSFOG00015019681	-	53	81.959	Scleropages_formosus
ENSCSAG00000014022	SRSF6	53	80.220	ENSSMAG00000017447	-	55	79.891	Scophthalmus_maximus
ENSCSAG00000014022	SRSF6	53	88.108	ENSSDUG00000016097	srsf6a	53	87.634	Seriola_dumerili
ENSCSAG00000014022	SRSF6	53	88.108	ENSSLDG00000022841	srsf6a	54	87.634	Seriola_lalandi_dorsalis
ENSCSAG00000014022	SRSF6	75	96.525	ENSSARG00000001602	SRSF6	100	96.525	Sorex_araneus
ENSCSAG00000014022	SRSF6	53	95.082	ENSSPUG00000004967	SRSF6	94	87.267	Sphenodon_punctatus
ENSCSAG00000014022	SRSF6	76	70.566	ENSSPAG00000002362	srsf6a	67	86.243	Stegastes_partitus
ENSCSAG00000014022	SRSF6	100	96.812	ENSSSCG00000007362	SRSF6	100	96.812	Sus_scrofa
ENSCSAG00000014022	SRSF6	93	84.211	ENSTGUG00000003455	SRSF6	94	85.015	Taeniopygia_guttata
ENSCSAG00000014022	SRSF6	87	71.096	ENSTNIG00000001692	srsf6a	57	86.022	Tetraodon_nigroviridis
ENSCSAG00000014022	SRSF6	85	93.793	ENSTBEG00000013448	SRSF6	92	94.118	Tupaia_belangeri
ENSCSAG00000014022	SRSF6	75	96.139	ENSTTRG00000015410	SRSF6	100	96.139	Tursiops_truncatus
ENSCSAG00000014022	SRSF6	100	97.391	ENSUAMG00000003559	SRSF6	100	97.391	Ursus_americanus
ENSCSAG00000014022	SRSF6	62	96.759	ENSUMAG00000001154	SRSF6	100	96.759	Ursus_maritimus
ENSCSAG00000014022	SRSF6	75	100.000	ENSVPAG00000003016	SRSF6	74	100.000	Vicugna_pacos
ENSCSAG00000014022	SRSF6	53	86.885	ENSXMAG00000021849	srsf6a	55	86.413	Xiphophorus_maculatus