EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAG00000014242 (Gene tree)
Gene ID
103245484
Gene Symbol
PABPC1L
Alias
C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name
poly(A) binding protein cytoplasmic 1 like
Gene Type
protein_coding
Species
Chlorocebus_sabaeus
Status
putative
Strand
Minus strand
Length
30971 bases
Position
chr2:18872021-18902991
Accession
15797
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAP00000010351PABPPF00658.185.9e-2811
ENSCSAP00000010351RRM_5PF13893.61.1e-0911
ENSCSAP00000010351RRM_1PF00076.229.2e-9014
ENSCSAP00000010351RRM_1PF00076.229.2e-9024
ENSCSAP00000010351RRM_1PF00076.229.2e-9034
ENSCSAP00000010351RRM_1PF00076.229.2e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAT00000012310PABPC1L-2012238-ENSCSAP00000010351614 (aa)-A0A0D9RP12
Gene Model
Click here to download ENSCSAG00000014242's gene model file
Pathways
Pathway IDPathway NameSource
csab03013RNA transportKEGG
csab03015mRNA surveillance pathwayKEGG
csab03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000014242's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAG00000014242PABPC1L5730.488ENSCSAG00000014399-5230.128
ENSCSAG00000014242PABPC1L6070.558ENSCSAG00000000102-9970.558
ENSCSAG00000014242PABPC1L6033.735ENSCSAG00000009718ELAVL28533.735
ENSCSAG00000014242PABPC1L6130.263ENSCSAG00000001257ELAVL48832.530
ENSCSAG00000014242PABPC1L9964.977ENSCSAG00000001135PABPC49864.000
ENSCSAG00000014242PABPC1L5632.237ENSCSAG00000019724-5330.769
ENSCSAG00000014242PABPC1L5730.488ENSCSAG00000014797-5230.128
ENSCSAG00000014242PABPC1L6159.270ENSCSAG00000000065PABPC59659.229
ENSCSAG00000014242PABPC1L5235.135ENSCSAG00000005786CELF16535.135
ENSCSAG00000014242PABPC1L5631.210ENSCSAG00000018616-5631.210
ENSCSAG00000014242PABPC1L5336.047ENSCSAG00000013405CELF26236.047
ENSCSAG00000014242PABPC1L5730.488ENSCSAG00000006389-5230.128
ENSCSAG00000014242PABPC1L9969.453ENSCSAG00000012017PABPC19869.453
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAG00000014242PABPC1L10098.534ENSG00000101104PABPC1L9999.691Homo_sapiens
ENSCSAG00000014242PABPC1L9966.720ENSAPOG00000010842pabpc1l9966.826Acanthochromis_polyacanthus
ENSCSAG00000014242PABPC1L9977.882ENSAMEG00000004099PABPC1L10078.193Ailuropoda_melanoleuca
ENSCSAG00000014242PABPC1L9869.954ENSACIG00000021004-9979.121Amphilophus_citrinellus
ENSCSAG00000014242PABPC1L9966.510ENSAOCG00000006167-9966.667Amphiprion_ocellaris
ENSCSAG00000014242PABPC1L9972.902ENSAPEG00000010558-9978.824Amphiprion_percula
ENSCSAG00000014242PABPC1L9969.305ENSATEG00000007428pabpc1l9969.305Anabas_testudineus
ENSCSAG00000014242PABPC1L9774.272ENSAPLG00000008415PABPC1L9874.355Anas_platyrhynchos
ENSCSAG00000014242PABPC1L9974.478ENSACAG00000011841PABPC1L9874.318Anolis_carolinensis
ENSCSAG00000014242PABPC1L10096.091ENSANAG00000026826PABPC1L10096.091Aotus_nancymaae
ENSCSAG00000014242PABPC1L9967.891ENSACLG00000024791pabpc1l9967.891Astatotilapia_calliptera
ENSCSAG00000014242PABPC1L9970.927ENSAMXG00000013552pabpc1l9969.920Astyanax_mexicanus
ENSCSAG00000014242PABPC1L5996.429ENSBTAG00000055300-10096.429Bos_taurus
ENSCSAG00000014242PABPC1L6777.193ENSBTAG00000016849PABPC1L8578.495Bos_taurus
ENSCSAG00000014242PABPC1L6076.437ENSCJAG00000038506-10076.437Callithrix_jacchus
ENSCSAG00000014242PABPC1L10096.580ENSCJAG00000017628PABPC1L10096.580Callithrix_jacchus
ENSCSAG00000014242PABPC1L9975.963ENSCAFG00000009573PABPC1L10075.347Canis_familiaris
ENSCSAG00000014242PABPC1L9988.033ENSCAFG00020013828PABPC1L9988.033Canis_lupus_dingo
ENSCSAG00000014242PABPC1L9787.124ENSCHIG00000025759PABPC1L9187.124Capra_hircus
ENSCSAG00000014242PABPC1L10088.599ENSTSYG00000006645PABPC1L10088.599Carlito_syrichta
ENSCSAG00000014242PABPC1L9980.510ENSCAPG00000014519PABPC1L10080.510Cavia_aperea
ENSCSAG00000014242PABPC1L10083.710ENSCPOG00000013633PABPC1L10083.710Cavia_porcellus
ENSCSAG00000014242PABPC1L10095.440ENSCCAG00000023338PABPC1L10095.440Cebus_capucinus
ENSCSAG00000014242PABPC1L10099.349ENSCATG00000034065PABPC1L10099.349Cercocebus_atys
ENSCSAG00000014242PABPC1L10081.774ENSCLAG00000005298PABPC1L10083.065Chinchilla_lanigera
ENSCSAG00000014242PABPC1L7281.757ENSCPBG00000017755-9981.757Chrysemys_picta_bellii
ENSCSAG00000014242PABPC1L5478.788ENSCPBG00000007810-8378.788Chrysemys_picta_bellii
ENSCSAG00000014242PABPC1L9750.405ENSCING00000002796-9749.798Ciona_intestinalis
ENSCSAG00000014242PABPC1L9757.500ENSCSAVG00000003102-10081.507Ciona_savignyi
ENSCSAG00000014242PABPC1L9860.193ENSCSAVG00000004246-8979.518Ciona_savignyi
ENSCSAG00000014242PABPC1L10093.740ENSCANG00000037530PABPC1L10093.740Colobus_angolensis_palliatus
ENSCSAG00000014242PABPC1L9977.273ENSCGRG00001021938Pabpc1l9977.273Cricetulus_griseus_chok1gshd
ENSCSAG00000014242PABPC1L9977.273ENSCGRG00000007946Pabpc1l9977.273Cricetulus_griseus_crigri
ENSCSAG00000014242PABPC1L9865.894ENSCSEG00000021295pabpc1l9965.894Cynoglossus_semilaevis
ENSCSAG00000014242PABPC1L9969.021ENSCVAG00000015943-8686.154Cyprinodon_variegatus
ENSCSAG00000014242PABPC1L9970.400ENSDARG00000002597pabpc1l8886.154Danio_rerio
ENSCSAG00000014242PABPC1L9989.233ENSDNOG00000048450PABPC1L9989.233Dasypus_novemcinctus
ENSCSAG00000014242PABPC1L9986.275ENSDORG00000001067Pabpc1l9986.275Dipodomys_ordii
ENSCSAG00000014242PABPC1L9690.650ENSETEG00000009969PABPC1L7390.650Echinops_telfairi
ENSCSAG00000014242PABPC1L5188.485ENSEASG00005023407-6788.485Equus_asinus_asinus
ENSCSAG00000014242PABPC1L5995.238ENSEASG00005023408-10095.238Equus_asinus_asinus
ENSCSAG00000014242PABPC1L6786.522ENSECAG00000040139-8286.522Equus_caballus
ENSCSAG00000014242PABPC1L10083.225ENSEEUG00000005978PABPC1L10083.225Erinaceus_europaeus
ENSCSAG00000014242PABPC1L9970.973ENSELUG00000001811pabpc1l9970.128Esox_lucius
ENSCSAG00000014242PABPC1L9988.525ENSFCAG00000011692PABPC1L9988.525Felis_catus
ENSCSAG00000014242PABPC1L8874.770ENSFALG00000005372PABPC1L9074.770Ficedula_albicollis
ENSCSAG00000014242PABPC1L10082.276ENSFDAG00000008291PABPC1L10082.114Fukomys_damarensis
ENSCSAG00000014242PABPC1L9969.775ENSFHEG00000003398pabpc1l9969.565Fundulus_heteroclitus
ENSCSAG00000014242PABPC1L9968.618ENSGMOG00000004437pabpc1l9868.618Gadus_morhua
ENSCSAG00000014242PABPC1L9769.931ENSGALG00000004123PABPC1L9983.213Gallus_gallus
ENSCSAG00000014242PABPC1L9965.802ENSGAFG00000021057pabpc1l9965.443Gambusia_affinis
ENSCSAG00000014242PABPC1L9967.305ENSGACG00000002792pabpc1l9966.826Gasterosteus_aculeatus
ENSCSAG00000014242PABPC1L9975.598ENSGAGG00000000589PABPC1L9584.019Gopherus_agassizii
ENSCSAG00000014242PABPC1L10098.208ENSGGOG00000004584PABPC1L10098.208Gorilla_gorilla
ENSCSAG00000014242PABPC1L9967.732ENSHBUG00000006134pabpc1l9967.732Haplochromis_burtoni
ENSCSAG00000014242PABPC1L10083.710ENSHGLG00000008434PABPC1L10083.710Heterocephalus_glaber_female
ENSCSAG00000014242PABPC1L5981.461ENSHGLG00100019506-10081.461Heterocephalus_glaber_male
ENSCSAG00000014242PABPC1L10083.710ENSHGLG00100012151PABPC1L10083.710Heterocephalus_glaber_male
ENSCSAG00000014242PABPC1L9967.987ENSHCOG00000009270pabpc1l9967.652Hippocampus_comes
ENSCSAG00000014242PABPC1L9970.880ENSIPUG00000012602pabpc1l9970.880Ictalurus_punctatus
ENSCSAG00000014242PABPC1L5961.494ENSIPUG00000006760-8861.494Ictalurus_punctatus
ENSCSAG00000014242PABPC1L6062.069ENSIPUG00000006780-8562.069Ictalurus_punctatus
ENSCSAG00000014242PABPC1L10088.599ENSSTOG00000003739PABPC1L10088.599Ictidomys_tridecemlineatus
ENSCSAG00000014242PABPC1L9968.909ENSJJAG00000022406Pabpc1l9966.396Jaculus_jaculus
ENSCSAG00000014242PABPC1L9969.305ENSKMAG00000016847pabpc1l9969.368Kryptolebias_marmoratus
ENSCSAG00000014242PABPC1L9967.035ENSLBEG00000010084pabpc1l9966.719Labrus_bergylta
ENSCSAG00000014242PABPC1L9969.683ENSLACG00000005762PABPC1L9971.009Latimeria_chalumnae
ENSCSAG00000014242PABPC1L9970.720ENSLOCG00000007519pabpc1l9870.673Lepisosteus_oculatus
ENSCSAG00000014242PABPC1L9985.256ENSLAFG00000003553PABPC1L10085.256Loxodonta_africana
ENSCSAG00000014242PABPC1L10099.186ENSMFAG00000040365PABPC1L10099.186Macaca_fascicularis
ENSCSAG00000014242PABPC1L10096.434ENSMNEG00000032298PABPC1L10096.434Macaca_nemestrina
ENSCSAG00000014242PABPC1L10099.349ENSMLEG00000043139PABPC1L10099.349Mandrillus_leucophaeus
ENSCSAG00000014242PABPC1L9768.197ENSMAMG00000011854pabpc1l9767.980Mastacembelus_armatus
ENSCSAG00000014242PABPC1L9967.891ENSMZEG00005023713pabpc1l9967.891Maylandia_zebra
ENSCSAG00000014242PABPC1L9975.201ENSMGAG00000003674PABPC1L9875.201Meleagris_gallopavo
ENSCSAG00000014242PABPC1L9975.325ENSMOCG00000013186Pabpc1l9975.490Microtus_ochrogaster
ENSCSAG00000014242PABPC1L9968.167ENSMMOG00000020574-9086.154Mola_mola
ENSCSAG00000014242PABPC1L9779.633ENSMODG00000016198PABPC1L9979.466Monodelphis_domestica
ENSCSAG00000014242PABPC1L9767.099ENSMALG00000021622pabpc1l10066.721Monopterus_albus
ENSCSAG00000014242PABPC1L9977.614MGP_CAROLIEiJ_G0024627Pabpc1l9977.614Mus_caroli
ENSCSAG00000014242PABPC1L9977.451ENSMUSG00000054582Pabpc1l9977.451Mus_musculus
ENSCSAG00000014242PABPC1L9977.814MGP_PahariEiJ_G0026071Pabpc1l9977.814Mus_pahari
ENSCSAG00000014242PABPC1L9977.614MGP_SPRETEiJ_G0025549Pabpc1l9977.614Mus_spretus
ENSCSAG00000014242PABPC1L9986.039ENSMPUG00000017646PABPC1L9986.039Mustela_putorius_furo
ENSCSAG00000014242PABPC1L9879.032ENSMLUG00000006324PABPC1L9779.032Myotis_lucifugus
ENSCSAG00000014242PABPC1L9980.065ENSNGAG00000010458Pabpc1l9980.065Nannospalax_galili
ENSCSAG00000014242PABPC1L9872.662ENSNBRG00000016633pabpc1l9978.161Neolamprologus_brichardi
ENSCSAG00000014242PABPC1L10068.078ENSMEUG00000007905-10068.078Notamacropus_eugenii
ENSCSAG00000014242PABPC1L10086.992ENSOPRG00000011846PABPC1L10086.992Ochotona_princeps
ENSCSAG00000014242PABPC1L10076.221ENSODEG00000015482PABPC1L10076.221Octodon_degus
ENSCSAG00000014242PABPC1L5874.375ENSODEG00000002920-9774.375Octodon_degus
ENSCSAG00000014242PABPC1L9967.891ENSONIG00000017314pabpc1l9967.891Oreochromis_niloticus
ENSCSAG00000014242PABPC1L8968.174ENSOANG00000015793-10068.174Ornithorhynchus_anatinus
ENSCSAG00000014242PABPC1L9980.710ENSOCUG00000003005PABPC1L10080.710Oryctolagus_cuniculus
ENSCSAG00000014242PABPC1L9771.831ENSORLG00000010322pabpc1l9976.250Oryzias_latipes
ENSCSAG00000014242PABPC1L9771.831ENSORLG00020021193pabpc1l9976.250Oryzias_latipes_hni
ENSCSAG00000014242PABPC1L9771.831ENSORLG00015017018pabpc1l9975.000Oryzias_latipes_hsok
ENSCSAG00000014242PABPC1L9964.286ENSOMEG00000010789pabpc1l9964.079Oryzias_melastigma
ENSCSAG00000014242PABPC1L9987.500ENSOGAG00000032999PABPC1L10087.500Otolemur_garnettii
ENSCSAG00000014242PABPC1L9987.213ENSOARG00000004578PABPC1L9987.213Ovis_aries
ENSCSAG00000014242PABPC1L10098.371ENSPPAG00000039677PABPC1L10098.371Pan_paniscus
ENSCSAG00000014242PABPC1L6381.790ENSPPRG00000019327-9881.790Panthera_pardus
ENSCSAG00000014242PABPC1L9888.576ENSPTIG00000006524PABPC1L9988.576Panthera_tigris_altaica
ENSCSAG00000014242PABPC1L6399.383ENSPTRG00000013531PABPC1L9999.383Pan_troglodytes
ENSCSAG00000014242PABPC1L10099.349ENSPANG00000018788PABPC1L10099.349Papio_anubis
ENSCSAG00000014242PABPC1L9971.383ENSPKIG00000007322pabpc1l9970.853Paramormyrops_kingsleyae
ENSCSAG00000014242PABPC1L5382.308ENSPKIG00000016810-9382.308Paramormyrops_kingsleyae
ENSCSAG00000014242PABPC1L6883.453ENSPSIG00000013289PABPC1L9983.453Pelodiscus_sinensis
ENSCSAG00000014242PABPC1L6178.605ENSPMGG00000023117pabpc1l9286.364Periophthalmus_magnuspinnatus
ENSCSAG00000014242PABPC1L7267.337ENSPMGG00000023121-9068.912Periophthalmus_magnuspinnatus
ENSCSAG00000014242PABPC1L9976.759ENSPEMG00000020671Pabpc1l9977.451Peromyscus_maniculatus_bairdii
ENSCSAG00000014242PABPC1L9969.530ENSPFOG00000013241pabpc1l9968.650Poecilia_formosa
ENSCSAG00000014242PABPC1L5386.923ENSPLAG00000023686-9286.923Poecilia_latipinna
ENSCSAG00000014242PABPC1L9968.860ENSPLAG00000017490-9968.810Poecilia_latipinna
ENSCSAG00000014242PABPC1L9969.318ENSPMEG00000007677pabpc1l9968.943Poecilia_mexicana
ENSCSAG00000014242PABPC1L5386.923ENSPMEG00000009185-8886.923Poecilia_mexicana
ENSCSAG00000014242PABPC1L6776.755ENSPREG00000015886pabpc1l9976.755Poecilia_reticulata
ENSCSAG00000014242PABPC1L10098.371ENSPPYG00000011042PABPC1L10098.371Pongo_abelii
ENSCSAG00000014242PABPC1L6293.750ENSPCAG00000011787-7593.750Procavia_capensis
ENSCSAG00000014242PABPC1L9989.786ENSPCOG00000020630PABPC1L9989.786Propithecus_coquereli
ENSCSAG00000014242PABPC1L9985.574ENSPVAG00000012663PABPC1L9985.574Pteropus_vampyrus
ENSCSAG00000014242PABPC1L9967.323ENSPNYG00000004101pabpc1l9978.161Pundamilia_nyererei
ENSCSAG00000014242PABPC1L9964.160ENSPNAG00000021248pabpc1l9963.301Pygocentrus_nattereri
ENSCSAG00000014242PABPC1L9977.634ENSRNOG00000012750Pabpc1l10077.634Rattus_norvegicus
ENSCSAG00000014242PABPC1L10098.697ENSRBIG00000035381PABPC1L10098.697Rhinopithecus_bieti
ENSCSAG00000014242PABPC1L10098.534ENSRROG00000044498PABPC1L10098.534Rhinopithecus_roxellana
ENSCSAG00000014242PABPC1L10095.765ENSSBOG00000009532-10095.765Saimiri_boliviensis_boliviensis
ENSCSAG00000014242PABPC1L9773.770ENSSHAG00000011446PABPC1L10073.770Sarcophilus_harrisii
ENSCSAG00000014242PABPC1L9971.795ENSSFOG00015017304pabpc1l9971.268Scleropages_formosus
ENSCSAG00000014242PABPC1L9968.379ENSSMAG00000010516pabpc1l9887.597Scophthalmus_maximus
ENSCSAG00000014242PABPC1L9967.987ENSSDUG00000014743pabpc1l9967.987Seriola_dumerili
ENSCSAG00000014242PABPC1L9873.621ENSSLDG00000006981pabpc1l9876.712Seriola_lalandi_dorsalis
ENSCSAG00000014242PABPC1L9973.836ENSSPUG00000004233PABPC1L9873.836Sphenodon_punctatus
ENSCSAG00000014242PABPC1L9965.733ENSSPAG00000017137pabpc1l9964.745Stegastes_partitus
ENSCSAG00000014242PABPC1L9986.842ENSSSCG00000007382PABPC1L9986.678Sus_scrofa
ENSCSAG00000014242PABPC1L9974.214ENSTGUG00000005114PABPC1L9974.214Taeniopygia_guttata
ENSCSAG00000014242PABPC1L9767.045ENSTRUG00000011085pabpc1l9767.045Takifugu_rubripes
ENSCSAG00000014242PABPC1L9965.348ENSTNIG00000017903pabpc1l9865.348Tetraodon_nigroviridis
ENSCSAG00000014242PABPC1L9494.178ENSTBEG00000002851PABPC1L8094.178Tupaia_belangeri
ENSCSAG00000014242PABPC1L9486.632ENSTTRG00000007618PABPC1L10086.655Tursiops_truncatus
ENSCSAG00000014242PABPC1L9985.997ENSUAMG00000017682PABPC1L9985.997Ursus_americanus
ENSCSAG00000014242PABPC1L6790.515ENSUMAG00000025436PABPC1L9490.515Ursus_maritimus
ENSCSAG00000014242PABPC1L9892.885ENSVVUG00000018939PABPC1L9992.885Vulpes_vulpes
ENSCSAG00000014242PABPC1L9969.872ENSXETG00000022831pabpc1l9869.887Xenopus_tropicalis
ENSCSAG00000014242PABPC1L9970.049ENSXCOG00000005459pabpc1l9982.270Xiphophorus_couchianus
ENSCSAG00000014242PABPC1L9969.579ENSXMAG00000017135pabpc1l9969.206Xiphophorus_maculatus

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