EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000014756 (Gene tree)
Gene ID: 103239744
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 15262 bases
Position: chr12:7462142-7477403
Accession: 103239744
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000010875	zf-C2H2	PF00096.26	5.9e-13	1	2
ENSCSAP00000010875	zf-C2H2	PF00096.26	5.9e-13	2	2
ENSCSAP00000010875	zf-met	PF12874.7	5.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000012850	PRDM12-201	1095	-	ENSCSAP00000010875	364 (aa)	XP_008004111	A0A0D9RQI6

Gene Model

Click here to download ENSCSAG00000014756's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000014756's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000014756	PRDM12	68	42.353	ENSCSAG00000003729	PRDM5	94	42.353

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000014756	PRDM12	100	98.910	ENSG00000130711	PRDM12	100	98.910	Homo_sapiens
ENSCSAG00000014756	PRDM12	99	74.740	ENSAPOG00000016051	prdm12b	90	80.290	Acanthochromis_polyacanthus
ENSCSAG00000014756	PRDM12	99	62.698	ENSAPOG00000018234	-	93	66.570	Acanthochromis_polyacanthus
ENSCSAG00000014756	PRDM12	89	95.046	ENSAMEG00000016234	PRDM12	99	95.046	Ailuropoda_melanoleuca
ENSCSAG00000014756	PRDM12	99	74.406	ENSACIG00000019578	prdm12b	93	79.656	Amphilophus_citrinellus
ENSCSAG00000014756	PRDM12	99	75.907	ENSACIG00000005193	-	91	80.580	Amphilophus_citrinellus
ENSCSAG00000014756	PRDM12	99	75.789	ENSAOCG00000015040	prdm12b	92	79.714	Amphiprion_ocellaris
ENSCSAG00000014756	PRDM12	99	76.393	ENSAPEG00000015092	prdm12b	92	80.403	Amphiprion_percula
ENSCSAG00000014756	PRDM12	100	72.396	ENSAPEG00000022849	-	89	78.655	Amphiprion_percula
ENSCSAG00000014756	PRDM12	99	74.805	ENSATEG00000014595	-	96	82.067	Anabas_testudineus
ENSCSAG00000014756	PRDM12	93	100.000	ENSANAG00000020616	PRDM12	100	100.000	Aotus_nancymaae
ENSCSAG00000014756	PRDM12	99	77.929	ENSACLG00000011876	prdm12b	92	82.143	Astatotilapia_calliptera
ENSCSAG00000014756	PRDM12	89	80.994	ENSACLG00000007631	-	87	80.994	Astatotilapia_calliptera
ENSCSAG00000014756	PRDM12	99	82.162	ENSAMXG00000033665	prdm12b	90	88.024	Astyanax_mexicanus
ENSCSAG00000014756	PRDM12	99	78.512	ENSAMXG00000008540	PRDM12	90	84.049	Astyanax_mexicanus
ENSCSAG00000014756	PRDM12	100	98.352	ENSBTAG00000023797	PRDM12	100	98.352	Bos_taurus
ENSCSAG00000014756	PRDM12	100	98.901	ENSCJAG00000020540	PRDM12	100	98.901	Callithrix_jacchus
ENSCSAG00000014756	PRDM12	88	98.442	ENSCAFG00000023076	PRDM12	99	98.442	Canis_familiaris
ENSCSAG00000014756	PRDM12	100	99.451	ENSCAFG00020024046	PRDM12	100	99.451	Canis_lupus_dingo
ENSCSAG00000014756	PRDM12	100	98.901	ENSCHIG00000025005	PRDM12	100	98.901	Capra_hircus
ENSCSAG00000014756	PRDM12	93	91.765	ENSCPOG00000005901	PRDM12	95	97.444	Cavia_porcellus
ENSCSAG00000014756	PRDM12	100	99.725	ENSCCAG00000037485	PRDM12	100	99.725	Cebus_capucinus
ENSCSAG00000014756	PRDM12	100	99.725	ENSCATG00000020327	PRDM12	100	99.725	Cercocebus_atys
ENSCSAG00000014756	PRDM12	92	97.305	ENSCLAG00000005499	PRDM12	92	97.305	Chinchilla_lanigera
ENSCSAG00000014756	PRDM12	100	89.011	ENSCPBG00000022628	PRDM12	94	92.814	Chrysemys_picta_bellii
ENSCSAG00000014756	PRDM12	100	98.087	ENSCGRG00001015005	Prdm12	100	98.087	Cricetulus_griseus_chok1gshd
ENSCSAG00000014756	PRDM12	99	76.944	ENSCVAG00000017166	prdm12b	92	82.111	Cyprinodon_variegatus
ENSCSAG00000014756	PRDM12	99	72.308	ENSCVAG00000000944	-	90	77.493	Cyprinodon_variegatus
ENSCSAG00000014756	PRDM12	99	81.769	ENSDARG00000007430	prdm12b	93	85.673	Danio_rerio
ENSCSAG00000014756	PRDM12	99	97.802	ENSDNOG00000042302	PRDM12	99	97.802	Dasypus_novemcinctus
ENSCSAG00000014756	PRDM12	89	62.963	ENSEBUG00000016780	prdm12b	78	64.387	Eptatretus_burgeri
ENSCSAG00000014756	PRDM12	100	98.352	ENSEASG00005008472	PRDM12	100	98.352	Equus_asinus_asinus
ENSCSAG00000014756	PRDM12	100	98.077	ENSECAG00000005933	PRDM12	100	98.077	Equus_caballus
ENSCSAG00000014756	PRDM12	99	76.022	ENSELUG00000013674	PRDM12	89	83.025	Esox_lucius
ENSCSAG00000014756	PRDM12	99	80.902	ENSELUG00000009905	prdm12b	91	86.310	Esox_lucius
ENSCSAG00000014756	PRDM12	100	99.176	ENSFCAG00000043086	PRDM12	100	99.176	Felis_catus
ENSCSAG00000014756	PRDM12	100	89.286	ENSFALG00000001445	PRDM12	84	93.114	Ficedula_albicollis
ENSCSAG00000014756	PRDM12	99	76.862	ENSFHEG00000003944	prdm12b	92	81.686	Fundulus_heteroclitus
ENSCSAG00000014756	PRDM12	99	73.590	ENSFHEG00000007746	-	88	79.941	Fundulus_heteroclitus
ENSCSAG00000014756	PRDM12	91	81.982	ENSGMOG00000011797	prdm12b	94	81.982	Gadus_morhua
ENSCSAG00000014756	PRDM12	100	89.286	ENSGALG00000003895	PRDM12	94	93.114	Gallus_gallus
ENSCSAG00000014756	PRDM12	100	77.067	ENSGAFG00000010827	prdm12b	90	82.596	Gambusia_affinis
ENSCSAG00000014756	PRDM12	100	77.748	ENSGACG00000016713	prdm12b	91	82.840	Gasterosteus_aculeatus
ENSCSAG00000014756	PRDM12	100	89.286	ENSGAGG00000014083	PRDM12	94	93.114	Gopherus_agassizii
ENSCSAG00000014756	PRDM12	100	98.907	ENSGGOG00000010568	PRDM12	100	98.907	Gorilla_gorilla
ENSCSAG00000014756	PRDM12	99	76.455	ENSHBUG00000022878	prdm12b	93	81.268	Haplochromis_burtoni
ENSCSAG00000014756	PRDM12	89	80.994	ENSHBUG00000022537	-	80	80.994	Haplochromis_burtoni
ENSCSAG00000014756	PRDM12	100	96.438	ENSHGLG00000013939	PRDM12	100	96.438	Heterocephalus_glaber_female
ENSCSAG00000014756	PRDM12	99	72.703	ENSHCOG00000021167	-	95	75.882	Hippocampus_comes
ENSCSAG00000014756	PRDM12	89	80.702	ENSHCOG00000003663	prdm12b	89	79.370	Hippocampus_comes
ENSCSAG00000014756	PRDM12	99	75.749	ENSIPUG00000019544	PRDM12	90	82.012	Ictalurus_punctatus
ENSCSAG00000014756	PRDM12	99	81.501	ENSIPUG00000017053	prdm12b	91	87.126	Ictalurus_punctatus
ENSCSAG00000014756	PRDM12	99	94.475	ENSSTOG00000005986	PRDM12	87	98.802	Ictidomys_tridecemlineatus
ENSCSAG00000014756	PRDM12	91	98.485	ENSJJAG00000005424	Prdm12	100	98.485	Jaculus_jaculus
ENSCSAG00000014756	PRDM12	90	77.562	ENSKMAG00000016921	prdm12b	89	78.212	Kryptolebias_marmoratus
ENSCSAG00000014756	PRDM12	99	75.477	ENSKMAG00000021205	-	92	81.040	Kryptolebias_marmoratus
ENSCSAG00000014756	PRDM12	99	74.611	ENSLBEG00000007776	-	89	81.306	Labrus_bergylta
ENSCSAG00000014756	PRDM12	99	76.720	ENSLBEG00000017769	prdm12b	88	84.132	Labrus_bergylta
ENSCSAG00000014756	PRDM12	99	86.501	ENSLACG00000017560	PRDM12	94	90.090	Latimeria_chalumnae
ENSCSAG00000014756	PRDM12	99	81.301	ENSLOCG00000005429	prdm12b	93	86.726	Lepisosteus_oculatus
ENSCSAG00000014756	PRDM12	92	97.647	ENSLAFG00000006979	PRDM12	91	97.647	Loxodonta_africana
ENSCSAG00000014756	PRDM12	100	97.275	ENSMFAG00000040322	PRDM12	100	97.275	Macaca_fascicularis
ENSCSAG00000014756	PRDM12	100	99.725	ENSMNEG00000037234	PRDM12	100	99.725	Macaca_nemestrina
ENSCSAG00000014756	PRDM12	89	80.952	ENSMAMG00000018988	-	86	80.952	Mastacembelus_armatus
ENSCSAG00000014756	PRDM12	99	75.718	ENSMAMG00000013212	prdm12b	90	83.086	Mastacembelus_armatus
ENSCSAG00000014756	PRDM12	89	80.994	ENSMZEG00005000415	PRDM12	86	80.994	Maylandia_zebra
ENSCSAG00000014756	PRDM12	94	92.962	ENSMGAG00000005438	PRDM12	94	93.114	Meleagris_gallopavo
ENSCSAG00000014756	PRDM12	100	96.438	ENSMAUG00000013040	Prdm12	100	96.438	Mesocricetus_auratus
ENSCSAG00000014756	PRDM12	100	97.802	ENSMICG00000015480	PRDM12	100	97.802	Microcebus_murinus
ENSCSAG00000014756	PRDM12	99	94.708	ENSMOCG00000021026	Prdm12	93	98.246	Microtus_ochrogaster
ENSCSAG00000014756	PRDM12	100	91.209	ENSMODG00000012108	PRDM12	94	95.210	Monodelphis_domestica
ENSCSAG00000014756	PRDM12	99	66.398	ENSMALG00000021901	prdm12b	88	71.171	Monopterus_albus
ENSCSAG00000014756	PRDM12	100	98.082	MGP_CAROLIEiJ_G0023414	Prdm12	100	98.082	Mus_caroli
ENSCSAG00000014756	PRDM12	100	98.082	ENSMUSG00000079466	Prdm12	100	98.082	Mus_musculus
ENSCSAG00000014756	PRDM12	100	98.082	MGP_PahariEiJ_G0024871	Prdm12	100	98.082	Mus_pahari
ENSCSAG00000014756	PRDM12	100	98.082	MGP_SPRETEiJ_G0024331	Prdm12	100	98.082	Mus_spretus
ENSCSAG00000014756	PRDM12	100	94.505	ENSNGAG00000018480	Prdm12	100	94.505	Nannospalax_galili
ENSCSAG00000014756	PRDM12	99	71.925	ENSNBRG00000024312	-	95	76.316	Neolamprologus_brichardi
ENSCSAG00000014756	PRDM12	99	75.000	ENSNBRG00000006727	prdm12b	93	80.571	Neolamprologus_brichardi
ENSCSAG00000014756	PRDM12	100	81.319	ENSMEUG00000003828	PRDM12	94	84.431	Notamacropus_eugenii
ENSCSAG00000014756	PRDM12	91	98.182	ENSOPRG00000008680	PRDM12	100	98.182	Ochotona_princeps
ENSCSAG00000014756	PRDM12	94	97.668	ENSODEG00000016282	PRDM12	64	97.668	Octodon_degus
ENSCSAG00000014756	PRDM12	62	88.987	ENSOANG00000001043	PRDM12	91	95.939	Ornithorhynchus_anatinus
ENSCSAG00000014756	PRDM12	86	92.971	ENSOCUG00000008241	PRDM12	98	94.098	Oryctolagus_cuniculus
ENSCSAG00000014756	PRDM12	100	75.654	ENSORLG00000007114	prdm12b	92	81.268	Oryzias_latipes
ENSCSAG00000014756	PRDM12	89	79.472	ENSORLG00000017558	-	87	80.059	Oryzias_latipes
ENSCSAG00000014756	PRDM12	100	75.066	ENSORLG00020019565	prdm12b	91	80.980	Oryzias_latipes_hni
ENSCSAG00000014756	PRDM12	89	79.240	ENSORLG00020013167	-	87	79.825	Oryzias_latipes_hni
ENSCSAG00000014756	PRDM12	91	79.827	ENSORLG00015007621	prdm12b	92	80.692	Oryzias_latipes_hsok
ENSCSAG00000014756	PRDM12	89	79.472	ENSORLG00015003435	-	87	80.059	Oryzias_latipes_hsok
ENSCSAG00000014756	PRDM12	99	73.575	ENSOMEG00000007762	-	94	78.348	Oryzias_melastigma
ENSCSAG00000014756	PRDM12	99	75.263	ENSOMEG00000004134	prdm12b	91	80.000	Oryzias_melastigma
ENSCSAG00000014756	PRDM12	91	99.399	ENSOGAG00000007557	PRDM12	100	99.399	Otolemur_garnettii
ENSCSAG00000014756	PRDM12	79	99.303	ENSPPAG00000031506	-	97	99.303	Pan_paniscus
ENSCSAG00000014756	PRDM12	100	87.123	ENSPPRG00000023024	PRDM12	86	90.746	Panthera_pardus
ENSCSAG00000014756	PRDM12	100	99.180	ENSPTRG00000043324	-	100	99.180	Pan_troglodytes
ENSCSAG00000014756	PRDM12	100	99.180	ENSPTRG00000021475	PRDM12	100	99.180	Pan_troglodytes
ENSCSAG00000014756	PRDM12	100	99.725	ENSPANG00000025967	PRDM12	100	99.725	Papio_anubis
ENSCSAG00000014756	PRDM12	94	78.063	ENSPKIG00000004305	PRDM12	94	80.539	Paramormyrops_kingsleyae
ENSCSAG00000014756	PRDM12	99	80.423	ENSPKIG00000007228	prdm12b	94	85.345	Paramormyrops_kingsleyae
ENSCSAG00000014756	PRDM12	100	88.462	ENSPSIG00000006739	PRDM12	94	92.216	Pelodiscus_sinensis
ENSCSAG00000014756	PRDM12	100	76.944	ENSPMGG00000008867	prdm12b	92	81.924	Periophthalmus_magnuspinnatus
ENSCSAG00000014756	PRDM12	99	73.629	ENSPMGG00000002356	-	88	81.250	Periophthalmus_magnuspinnatus
ENSCSAG00000014756	PRDM12	95	95.389	ENSPEMG00000009969	Prdm12	91	98.494	Peromyscus_maniculatus_bairdii
ENSCSAG00000014756	PRDM12	100	91.484	ENSPCIG00000024119	PRDM12	94	95.509	Phascolarctos_cinereus
ENSCSAG00000014756	PRDM12	99	77.600	ENSPFOG00000019841	prdm12b	93	82.216	Poecilia_formosa
ENSCSAG00000014756	PRDM12	90	83.036	ENSPLAG00000016626	prdm12b	90	82.891	Poecilia_latipinna
ENSCSAG00000014756	PRDM12	97	76.630	ENSPMEG00000016698	prdm12b	89	82.371	Poecilia_mexicana
ENSCSAG00000014756	PRDM12	100	76.963	ENSPREG00000015073	prdm12b	89	82.749	Poecilia_reticulata
ENSCSAG00000014756	PRDM12	96	73.204	ENSPREG00000003211	-	90	78.049	Poecilia_reticulata
ENSCSAG00000014756	PRDM12	96	97.721	ENSPPYG00000019694	PRDM12	100	97.721	Pongo_abelii
ENSCSAG00000014756	PRDM12	100	98.634	ENSPCOG00000022255	PRDM12	100	98.634	Propithecus_coquereli
ENSCSAG00000014756	PRDM12	100	97.814	ENSPVAG00000001511	PRDM12	100	97.814	Pteropus_vampyrus
ENSCSAG00000014756	PRDM12	89	80.994	ENSPNYG00000013589	-	86	80.994	Pundamilia_nyererei
ENSCSAG00000014756	PRDM12	99	75.789	ENSPNYG00000009607	prdm12b	93	80.516	Pundamilia_nyererei
ENSCSAG00000014756	PRDM12	99	74.462	ENSPNAG00000013396	PRDM12	88	80.606	Pygocentrus_nattereri
ENSCSAG00000014756	PRDM12	99	82.038	ENSPNAG00000024532	prdm12b	91	88.323	Pygocentrus_nattereri
ENSCSAG00000014756	PRDM12	100	98.082	ENSRNOG00000009218	Prdm12	100	98.082	Rattus_norvegicus
ENSCSAG00000014756	PRDM12	87	100.000	ENSRBIG00000042712	PRDM12	91	97.568	Rhinopithecus_bieti
ENSCSAG00000014756	PRDM12	88	100.000	ENSRROG00000043554	PRDM12	100	100.000	Rhinopithecus_roxellana
ENSCSAG00000014756	PRDM12	100	90.685	ENSSHAG00000015972	PRDM12	94	94.627	Sarcophilus_harrisii
ENSCSAG00000014756	PRDM12	99	73.724	ENSSMAG00000003754	prdm12b	90	79.772	Scophthalmus_maximus
ENSCSAG00000014756	PRDM12	99	75.065	ENSSDUG00000023498	prdm12b	90	80.925	Seriola_dumerili
ENSCSAG00000014756	PRDM12	93	81.105	ENSSDUG00000019071	-	90	83.180	Seriola_dumerili
ENSCSAG00000014756	PRDM12	99	78.142	ENSSLDG00000013562	-	93	84.049	Seriola_lalandi_dorsalis
ENSCSAG00000014756	PRDM12	99	75.393	ENSSLDG00000009557	prdm12b	90	81.341	Seriola_lalandi_dorsalis
ENSCSAG00000014756	PRDM12	100	88.736	ENSSPUG00000013424	PRDM12	94	92.515	Sphenodon_punctatus
ENSCSAG00000014756	PRDM12	99	65.803	ENSSPAG00000022420	-	87	74.769	Stegastes_partitus
ENSCSAG00000014756	PRDM12	99	75.591	ENSSPAG00000018824	prdm12b	90	81.871	Stegastes_partitus
ENSCSAG00000014756	PRDM12	100	99.451	ENSSSCG00000005703	PRDM12	100	99.451	Sus_scrofa
ENSCSAG00000014756	PRDM12	99	76.984	ENSTRUG00000018659	prdm12b	92	82.111	Takifugu_rubripes
ENSCSAG00000014756	PRDM12	99	75.472	ENSTRUG00000013239	-	93	81.627	Takifugu_rubripes
ENSCSAG00000014756	PRDM12	99	75.272	ENSTNIG00000005859	-	92	80.547	Tetraodon_nigroviridis
ENSCSAG00000014756	PRDM12	99	77.309	ENSTNIG00000009020	prdm12b	91	83.186	Tetraodon_nigroviridis
ENSCSAG00000014756	PRDM12	96	98.567	ENSUAMG00000009653	PRDM12	97	98.567	Ursus_americanus
ENSCSAG00000014756	PRDM12	91	99.398	ENSVVUG00000027662	PRDM12	79	99.398	Vulpes_vulpes
ENSCSAG00000014756	PRDM12	100	77.480	ENSXCOG00000002836	prdm12b	91	82.596	Xiphophorus_couchianus
ENSCSAG00000014756	PRDM12	99	77.067	ENSXMAG00000005537	prdm12b	91	82.111	Xiphophorus_maculatus
ENSCSAG00000014756	PRDM12	99	73.698	ENSXMAG00000028012	-	88	80.000	Xiphophorus_maculatus